Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2003
         (580 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ131244-1|CAA10334.1| 1078|Homo sapiens Sec24A protein protein.       31   3.9  
BC053878-1|AAH53878.1|  619|Homo sapiens zeta-chain (TCR) associ...    29   9.0  
BC039039-1|AAH39039.1|  493|Homo sapiens ZAP70 protein protein.        29   9.0  
AC016699-1|AAX93187.1|  493|Homo sapiens unknown protein.              29   9.0  

>AJ131244-1|CAA10334.1| 1078|Homo sapiens Sec24A protein protein.
          Length = 1078

 Score = 30.7 bits (66), Expect = 3.9
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 246 SESPTSAVGAEAPRELPNELSAPYEVPQFPIEQIEKKLLI 365
           ++ PT  VGA  PRE PN  S+  ++   P     KKL +
Sbjct: 624 TQLPTLGVGALKPREEPNHRSSAKDIHMTPSTDFYKKLAL 663


>BC053878-1|AAH53878.1|  619|Homo sapiens zeta-chain (TCR)
           associated protein kinase 70kDa protein.
          Length = 619

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 222 DSFFDDGGSESPTSAVGAEAPRELPNELSAPYEVPQFPIEQIEKKLLIQRQLNVKAAE 395
           D+   DG +  P      + PR +P + S  YE P    E+++ K L  ++ N+  A+
Sbjct: 285 DTLNSDGYTPEPARITSPDKPRPMPMDTSV-YESPYSDPEELKDKKLFLKRDNLLIAD 341


>BC039039-1|AAH39039.1|  493|Homo sapiens ZAP70 protein protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 222 DSFFDDGGSESPTSAVGAEAPRELPNELSAPYEVPQFPIEQIEKKLLIQRQLNVKAAE 395
           D+   DG +  P      + PR +P + S  YE P    E+++ K L  ++ N+  A+
Sbjct: 159 DTLNSDGYTPEPARITSPDKPRPMPMDTSV-YESPYSDPEELKDKKLFLKRDNLLIAD 215


>AC016699-1|AAX93187.1|  493|Homo sapiens unknown protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 222 DSFFDDGGSESPTSAVGAEAPRELPNELSAPYEVPQFPIEQIEKKLLIQRQLNVKAAE 395
           D+   DG +  P      + PR +P + S  YE P    E+++ K L  ++ N+  A+
Sbjct: 159 DTLNSDGYTPEPARITSPDKPRPMPMDTSV-YESPYSDPEELKDKKLFLKRDNLLIAD 215


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,665,554
Number of Sequences: 237096
Number of extensions: 1159988
Number of successful extensions: 3318
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3303
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)