Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1994
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    25   2.5  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    25   2.5  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   5.8  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 358 SVLKWARVIDEFLNQYRKKGSGSGEAHG 441
           S+ K  R +DE +NQ  +KG G G   G
Sbjct: 534 SLEKDLRSLDENVNQIHQKGGGGGGGGG 561


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 358 SVLKWARVIDEFLNQYRKKGSGSGEAHG 441
           S+ K  R +DE +NQ  +KG G G   G
Sbjct: 535 SLEKDLRSLDENVNQIHQKGGGGGGGGG 562


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 122 RPRTWPVSELYRKILNASHFPRXRWRSVILFSY 24
           RP    V+     I   +  P  RWR + ++SY
Sbjct: 168 RPSVVDVAFASSSIAGVNTIPEHRWRIISIYSY 200


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 821,443
Number of Sequences: 2352
Number of extensions: 18316
Number of successful extensions: 72
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)