Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1983
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    28   0.27 
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    27   0.35 
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            25   1.4  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   7.5  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   10.0 

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 27.9 bits (59), Expect = 0.27
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 432 IRSAITHRGTEKTPYRLWYQNGRGVEALSCFSC 334
           +++  + R  EKTP+ LWY        L  F C
Sbjct: 213 LQNISSSRSIEKTPFELWYGKQPDYSNLHIFGC 245


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 27.5 bits (58), Expect = 0.35
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 475 LSGGMCQTFTKES*DPVSNNPSWN 404
           +S G C+T TK S DPV N+ + N
Sbjct: 224 ISAGPCRTNTKSSSDPVLNHDTTN 247


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 304 AWLFCLWTTAAGKARQCLYSTPILIP 381
           AW   +W     KA + L+  P LIP
Sbjct: 437 AWTTIIWDNLCAKADRKLFEVPNLIP 462


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/33 (21%), Positives = 16/33 (48%)
 Frame = -1

Query: 432 IRSAITHRGTEKTPYRLWYQNGRGVEALSCFSC 334
           +++ +     E+TP+ +W+     +  L  F C
Sbjct: 478 LQNRLPSAAVERTPFEIWFGRKPDLTNLRLFXC 510


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
 Frame = -2

Query: 413 IVERRKLHIGYGIRM----GVE*RHCLAFPAAVVQRQN 312
           +VE+ + HIG G+R+    G     CL+  +  VQ  N
Sbjct: 363 VVEQTRRHIGKGVRLYYIGGEVFAECLSDSSIFVQSPN 400


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,562
Number of Sequences: 2352
Number of extensions: 13690
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)