Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1976
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   334   2e-93
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         27   0.47 
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    25   3.3  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   5.8  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   7.6  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  334 bits (820), Expect = 2e-93
 Identities = 157/211 (74%), Positives = 173/211 (81%)
 Frame = -2

Query: 734 LDYXERPWIHQGELFKDIIPXPW*RCXFGCCTLPADPYKFKXRKELFIAPEGLYTGQFVY 555
           LDY ER    +G + K II  P             DPY+F+  K+LFIA EG+YTGQFVY
Sbjct: 32  LDYAERHGYLKG-VVKQIIQDPGRGAPLAVVNF-RDPYRFRLSKQLFIAAEGMYTGQFVY 89

Query: 554 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 375
           CG++A L++GNV+P+G MPEGTIVCNLEEK GDRG+LAR SGN+A+VI HNPD KRTRVK
Sbjct: 90  CGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVK 149

Query: 374 LPXGAKKVXPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEH 195
           LP GAKKV PS+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP VRGVAMNPVEH
Sbjct: 150 LPSGAKKVLPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEH 209

Query: 194 PHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 102
           PHGGGNHQHIGKASTVKRGT  GRKVGLIAA
Sbjct: 210 PHGGGNHQHIGKASTVKRGTPPGRKVGLIAA 240


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 344 SSNRGMVGIVAGGGRIDKPILKAGRAYHK 258
           S+ +  +G V GG   D  IL  GRAYH+
Sbjct: 81  SAGQVPLGAVVGGHTSDGEILYVGRAYHE 109


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 342 KQQRHGRYCCWRWTY 298
           +QQ+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 441 CQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLA 569
           C+T SIT  +        LRH      +S ++S +L  ++KLA
Sbjct: 180 CETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWL-RLSKLA 221


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 206 GSWQHHVHMASSYV*PCTCGMPFQLSK*VCQY 301
           GS  H     SSYV    CG P ++    C++
Sbjct: 504 GSEGHKARDCSSYVKCAACGGPHRIGHMSCEH 535


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,597
Number of Sequences: 2352
Number of extensions: 17634
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)