Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1976
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 294 5e-80
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 36 0.031
Z81031-6|CAF31465.2| 199|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81031-5|CAF31466.2| 196|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81031-4|CAF31468.2| 421|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81031-3|CAF31467.1| 455|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81031-2|CAF31464.1| 429|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81031-1|CAB02718.4| 432|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF539813-1|AAN16458.1| 444|Caenorhabditis elegans tyramine rece... 29 4.7
AF539814-1|AAN16459.1| 421|Caenorhabditis elegans tyramine rece... 28 6.2
Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical pr... 28 8.1
U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical p... 28 8.1
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 294 bits (721), Expect = 5e-80
Identities = 135/211 (63%), Positives = 161/211 (76%)
Frame = -2
Query: 734 LDYXERPWIHQGELFKDIIPXPW*RCXFGCCTLPADPYKFKXRKELFIAPEGLYTGQFVY 555
LDY ER +G L KDII P DPYK+K K +A EG++TGQF++
Sbjct: 32 LDYAERHGYIKG-LVKDIIHDPGRGAPLAIIAF-RDPYKYKTVKTTVVAAEGMHTGQFIH 89
Query: 554 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 375
CG KA +++GN++PVG +PEGT +CN+E K GDRG +ARASGN+ATVI HNPD K+TR++
Sbjct: 90 CGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIAHNPDTKKTRIR 149
Query: 374 LPXGAKKVXPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEH 195
LP GAKKV S NR M+G+VAGGGR DKP+LKAGR+YHKYK KRN WP VRGVAMNPVEH
Sbjct: 150 LPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNPVEH 209
Query: 194 PHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 102
PHGGGNHQHIG STV+R SAG+KVGLIAA
Sbjct: 210 PHGGGNHQHIGHPSTVRRDASAGKKVGLIAA 240
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 527 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 369
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>Z81031-6|CAF31465.2| 199|Caenorhabditis elegans Hypothetical
protein C02D4.2c protein.
Length = 199
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/92 (29%), Positives = 42/92 (45%)
Frame = +1
Query: 271 LPAFKIGLSIRPPPATIPTMPLLLDGXTFLAPXGSFTLVRLASGLCPITVAKFPEARARR 450
LP I ++ PP+ IPT+ L+L T+L + T+V G + VA F + R
Sbjct: 33 LPPLDIPMTSMKPPSIIPTVELVLGTITYLVII-AMTVV----GNTLVVVAVF----SYR 83
Query: 451 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 546
PL + + L ++ S +A P V F
Sbjct: 84 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 115
>Z81031-5|CAF31466.2| 196|Caenorhabditis elegans Hypothetical
protein C02D4.2d protein.
Length = 196
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/92 (29%), Positives = 42/92 (45%)
Frame = +1
Query: 271 LPAFKIGLSIRPPPATIPTMPLLLDGXTFLAPXGSFTLVRLASGLCPITVAKFPEARARR 450
LP I ++ PP+ IPT+ L+L T+L + T+V G + VA F + R
Sbjct: 30 LPPLDIPMTSMKPPSIIPTVELVLGTITYLVII-AMTVV----GNTLVVVAVF----SYR 80
Query: 451 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 546
PL + + L ++ S +A P V F
Sbjct: 81 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 112
>Z81031-4|CAF31468.2| 421|Caenorhabditis elegans Hypothetical
protein C02D4.2f protein.
Length = 421
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/92 (29%), Positives = 42/92 (45%)
Frame = +1
Query: 271 LPAFKIGLSIRPPPATIPTMPLLLDGXTFLAPXGSFTLVRLASGLCPITVAKFPEARARR 450
LP I ++ PP+ IPT+ L+L T+L + T+V G + VA F + R
Sbjct: 25 LPPLDIPMTSMKPPSIIPTVELVLGTITYLVII-AMTVV----GNTLVVVAVF----SYR 75
Query: 451 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 546
PL + + L ++ S +A P V F
Sbjct: 76 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 107
>Z81031-3|CAF31467.1| 455|Caenorhabditis elegans Hypothetical
protein C02D4.2e protein.
Length = 455
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/92 (29%), Positives = 42/92 (45%)
Frame = +1
Query: 271 LPAFKIGLSIRPPPATIPTMPLLLDGXTFLAPXGSFTLVRLASGLCPITVAKFPEARARR 450
LP I ++ PP+ IPT+ L+L T+L + T+V G + VA F + R
Sbjct: 36 LPPLDIPMTSMKPPSIIPTVELVLGTITYLVII-AMTVV----GNTLVVVAVF----SYR 86
Query: 451 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 546
PL + + L ++ S +A P V F
Sbjct: 87 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 118
>Z81031-2|CAF31464.1| 429|Caenorhabditis elegans Hypothetical
protein C02D4.2b protein.
Length = 429
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/92 (29%), Positives = 42/92 (45%)
Frame = +1
Query: 271 LPAFKIGLSIRPPPATIPTMPLLLDGXTFLAPXGSFTLVRLASGLCPITVAKFPEARARR 450
LP I ++ PP+ IPT+ L+L T+L + T+V G + VA F + R
Sbjct: 33 LPPLDIPMTSMKPPSIIPTVELVLGTITYLVII-AMTVV----GNTLVVVAVF----SYR 83
Query: 451 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 546
PL + + L ++ S +A P V F
Sbjct: 84 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 115
>Z81031-1|CAB02718.4| 432|Caenorhabditis elegans Hypothetical
protein C02D4.2a protein.
Length = 432
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/92 (29%), Positives = 42/92 (45%)
Frame = +1
Query: 271 LPAFKIGLSIRPPPATIPTMPLLLDGXTFLAPXGSFTLVRLASGLCPITVAKFPEARARR 450
LP I ++ PP+ IPT+ L+L T+L + T+V G + VA F + R
Sbjct: 36 LPPLDIPMTSMKPPSIIPTVELVLGTITYLVII-AMTVV----GNTLVVVAVF----SYR 86
Query: 451 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 546
PL + + L ++ S +A P V F
Sbjct: 87 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 118
>AF539813-1|AAN16458.1| 444|Caenorhabditis elegans tyramine
receptor long isoformSER-2 protein.
Length = 444
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/92 (29%), Positives = 42/92 (45%)
Frame = +1
Query: 271 LPAFKIGLSIRPPPATIPTMPLLLDGXTFLAPXGSFTLVRLASGLCPITVAKFPEARARR 450
LP I ++ PP+ IPT+ L+L T+L + T+V G + VA F + R
Sbjct: 25 LPPLDIPMTSMKPPSIIPTVELVLGTITYLVII-AMTVV----GNTLVVVAVF----SYR 75
Query: 451 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 546
PL + + L ++ S +A P V F
Sbjct: 76 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 107
>AF539814-1|AAN16459.1| 421|Caenorhabditis elegans tyramine
receptor short isoformSER-2a protein.
Length = 421
Score = 28.3 bits (60), Expect = 6.2
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +1
Query: 271 LPAFKIGLSIRPPPATIPTMPLLLDGXTFLAPXGSFTLVRLASGLCPITVAKFPEARARR 450
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 25 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMAVVGNTLVVVAVF----SYR 75
Query: 451 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 546
PL + + L ++ S +A P V F
Sbjct: 76 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 107
>Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical
protein T05F1.8 protein.
Length = 393
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +1
Query: 247 LTLYLWYALPAFKIGLSI-RPPPATIP---TMPLLLDGXTFLAP 366
LT W+ +FK+ +++ RPPP +P L + G T +AP
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPQMPESLKKKLGIPGTTEVAP 352
>U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical
protein C33F10.12 protein.
Length = 392
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +1
Query: 247 LTLYLWYALPAFKIGLSI-RPPPATIP---TMPLLLDGXTFLAP 366
LT W+ +FK+ +++ RPPP +P L + G T +AP
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPRMPESLKKKLGIPGTTEVAP 352
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,976,635
Number of Sequences: 27780
Number of extensions: 378109
Number of successful extensions: 909
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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