Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1975
(319 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical p... 140 1e-34
U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical p... 140 1e-34
AL033514-25|CAA22109.1| 570|Caenorhabditis elegans Hypothetical... 28 1.3
Z68118-1|CAA92186.2| 1014|Caenorhabditis elegans Hypothetical pr... 28 1.7
AF235027-1|AAF68380.1| 1017|Caenorhabditis elegans guanylyl cycl... 28 1.7
Z36752-7|CAA85329.1| 468|Caenorhabditis elegans Hypothetical pr... 27 2.2
U61946-6|AAC24391.1| 137|Caenorhabditis elegans Hypothetical pr... 27 3.9
U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20 pr... 27 3.9
Z47809-7|CAA87783.1| 662|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z47808-10|CAA87778.1| 662|Caenorhabditis elegans Hypothetical p... 26 5.1
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 26 5.1
Z92806-4|CAB07259.1| 727|Caenorhabditis elegans Hypothetical pr... 26 6.8
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 26 6.8
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 26 6.8
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 26 6.8
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 26 6.8
U21317-5|AAA62526.2| 895|Caenorhabditis elegans Hypothetical pr... 26 6.8
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 26 6.8
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 26 6.8
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 26 6.8
AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical ... 26 6.8
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 26 6.8
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 26 6.8
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 26 6.8
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 26 6.8
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 26 6.8
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 25 8.9
U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical pr... 25 8.9
AF039036-5|AAB94164.2| 351|Caenorhabditis elegans Hypothetical ... 25 8.9
AF003130-12|AAB54128.2| 175|Caenorhabditis elegans Hypothetical... 25 8.9
AF003130-11|AAM15579.1| 250|Caenorhabditis elegans Hypothetical... 25 8.9
AF003130-9|AAP68939.1| 307|Caenorhabditis elegans Hypothetical ... 25 8.9
>U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical
protein F46F11.1b protein.
Length = 1225
Score = 140 bits (340), Expect = 1e-34
Identities = 64/99 (64%), Positives = 74/99 (74%)
Frame = +3
Query: 21 KAIQYEKLRKPYVINNLHMQYDIQDRRRVYAILEGEGIEIPRYAVLDRDSPDPKHHELVE 200
KAI Y KLR PYVINNL QYD+ DRR V+ IL GIE PR+ + R P+ ELVE
Sbjct: 84 KAIAYVKLRNPYVINNLDRQYDLLDRRTVFKILSDNGIEHPRHGYVIRGRPNEPDTELVE 143
Query: 201 SEDHVEVNGVVFNKPFVEKPVSAEDHNIYIYYPTSAGGG 317
DH+EVNG VFNKPFVEKP+S+EDHN+YIYYP+S GGG
Sbjct: 144 HPDHIEVNGEVFNKPFVEKPISSEDHNVYIYYPSSVGGG 182
>U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical
protein F46F11.1a protein.
Length = 1339
Score = 140 bits (340), Expect = 1e-34
Identities = 64/99 (64%), Positives = 74/99 (74%)
Frame = +3
Query: 21 KAIQYEKLRKPYVINNLHMQYDIQDRRRVYAILEGEGIEIPRYAVLDRDSPDPKHHELVE 200
KAI Y KLR PYVINNL QYD+ DRR V+ IL GIE PR+ + R P+ ELVE
Sbjct: 84 KAIAYVKLRNPYVINNLDRQYDLLDRRTVFKILSDNGIEHPRHGYVIRGRPNEPDTELVE 143
Query: 201 SEDHVEVNGVVFNKPFVEKPVSAEDHNIYIYYPTSAGGG 317
DH+EVNG VFNKPFVEKP+S+EDHN+YIYYP+S GGG
Sbjct: 144 HPDHIEVNGEVFNKPFVEKPISSEDHNVYIYYPSSVGGG 182
>AL033514-25|CAA22109.1| 570|Caenorhabditis elegans Hypothetical
protein Y75B8A.25 protein.
Length = 570
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 174 DPKHHELVESEDHVEVNGVVFNKPFVEKPVSAE 272
D K +LV++ V+V N+PF+ KP E
Sbjct: 69 DKKFEDLVKAMSEVDVGSKKENRPFLRKPTDLE 101
>Z68118-1|CAA92186.2| 1014|Caenorhabditis elegans Hypothetical
protein R01E6.1 protein.
Length = 1014
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 76 CNTTYRTVEEFTPYWKGKV*RYHGTRFWIETHQIQNITS*LNL 204
C T RT+ +F WK V Y E +Q +TS +N+
Sbjct: 83 CTTDIRTIGDFAEIWKSPVIGYEPV---FEARGVQELTSVINV 122
>AF235027-1|AAF68380.1| 1017|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1017
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 76 CNTTYRTVEEFTPYWKGKV*RYHGTRFWIETHQIQNITS*LNL 204
C T RT+ +F WK V Y E +Q +TS +N+
Sbjct: 83 CTTDIRTIGDFAEIWKSPVIGYEPV---FEARGVQELTSVINV 122
>Z36752-7|CAA85329.1| 468|Caenorhabditis elegans Hypothetical
protein F35H8.7 protein.
Length = 468
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 290 NVYIVVLSGHGLLHERLVEHNPVHFDVVF 204
NV++ +L G G LH + HN + D +F
Sbjct: 203 NVFLDILQGLGHLHNNFMLHNDIKPDNIF 231
>U61946-6|AAC24391.1| 137|Caenorhabditis elegans Hypothetical
protein F47C12.6 protein.
Length = 137
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -3
Query: 242 LVEHNPVHFDVVFRFN*LVMFWIW*VSIQNRVPW 141
L+ +P+HFDV + + FW + I W
Sbjct: 14 LIHGDPIHFDVAIHCDSSIKFWCGDIIIYEHDTW 47
>U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20
protein family) homologprotein 1 protein.
Length = 507
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 219 VNGVVFNKPFVEKPVSAEDHNIYIY 293
V G+VFN+P+ E +++D + IY
Sbjct: 416 VGGIVFNRPYSEMLTASDDGFLRIY 440
>Z47809-7|CAA87783.1| 662|Caenorhabditis elegans Hypothetical
protein D2013.9 protein.
Length = 662
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = -2
Query: 231 QPRSLRRGLQIQLTRDVLDLVSLYPEPRTVVSLYLPLPV 115
+P +L RG+ + +T D+ ++ + +V Y+P P+
Sbjct: 441 KPWNLARGMDMTVTEDLNQIIRMIETGPKIVCEYIPRPL 479
>Z47808-10|CAA87778.1| 662|Caenorhabditis elegans Hypothetical
protein D2013.9 protein.
Length = 662
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = -2
Query: 231 QPRSLRRGLQIQLTRDVLDLVSLYPEPRTVVSLYLPLPV 115
+P +L RG+ + +T D+ ++ + +V Y+P P+
Sbjct: 441 KPWNLARGMDMTVTEDLNQIIRMIETGPKIVCEYIPRPL 479
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 51 PYVINN--LHMQYDIQDRRRVYAILEGEGIEIPRYAVLDRDSPDPKHHELVE 200
PYV N+ H Q IQ+ ++V+ I++P+ ++ D K+H +E
Sbjct: 66 PYVQNSNYQHYQSAIQNGQQVFQQPFNLPIQLPQMGLMKFDGDFTKYHSFIE 117
>Z92806-4|CAB07259.1| 727|Caenorhabditis elegans Hypothetical
protein K10G4.4 protein.
Length = 727
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 159 DRDSPDPKHHELVESEDHVEVNGVVFNKPFVEKPVSAEDH 278
D + P H++VES++ ++ V N ++ PV H
Sbjct: 108 DDEDKKPIFHQIVESDNWKKLKAVSINSFYLAGPVQQVSH 147
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 177 PKHHELVESEDHVEVNGVVFNKPFVEKPVS 266
P H E+ +ED E +GVV N + P S
Sbjct: 156 PNHREVRPAEDSTETSGVVQNNDELLVPTS 185
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 177 PKHHELVESEDHVEVNGVVFNKPFVEKPVS 266
P H E+ +ED E +GVV N + P S
Sbjct: 156 PNHREVRPAEDSTETSGVVQNNDELLVPTS 185
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 216 EVNGVVFN-KPFVEKPVSAEDHNIYIYYP 299
E+ + FN K FV KP+ + H+ Y P
Sbjct: 246 EIRNISFNDKKFVIKPIDKKAHDFVFYAP 274
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 216 EVNGVVFN-KPFVEKPVSAEDHNIYIYYP 299
E+ + FN K FV KP+ + H+ Y P
Sbjct: 245 EIRNISFNDKKFVIKPIDKKAHDFVFYAP 273
>U21317-5|AAA62526.2| 895|Caenorhabditis elegans Hypothetical
protein B0495.7 protein.
Length = 895
Score = 25.8 bits (54), Expect = 6.8
Identities = 8/31 (25%), Positives = 19/31 (61%)
Frame = +3
Query: 204 EDHVEVNGVVFNKPFVEKPVSAEDHNIYIYY 296
E+ + V + P++EKP + ++ N +++Y
Sbjct: 342 ENVLAVVRAILKSPYLEKPATFDEENRWVFY 372
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 216 EVNGVVFN-KPFVEKPVSAEDHNIYIYYP 299
E+ + FN K FV KP+ + H+ Y P
Sbjct: 245 EIRNISFNDKKFVIKPIDKKAHDFVFYAP 273
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 216 EVNGVVFN-KPFVEKPVSAEDHNIYIYYP 299
E+ + FN K FV KP+ + H+ Y P
Sbjct: 245 EIRNISFNDKKFVIKPIDKKAHDFVFYAP 273
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 177 PKHHELVESEDHVEVNGVVFNKPFVEKPVS 266
P H E+ +ED E +GVV N + P S
Sbjct: 156 PNHREVRPAEDSTETSGVVQNNDELLVPTS 185
>AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical
protein Y17G9B.1 protein.
Length = 480
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 174 DPKHHELVESEDHVEVNGVVFNKPFVEKPVSAEDHNI 284
D K ELV+S V PF KP E +N+
Sbjct: 26 DRKFEELVKSMSEAHVEPEKMKIPFSRKPTEQETNNL 62
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 216 EVNGVVFN-KPFVEKPVSAEDHNIYIYYP 299
E+ + FN K FV KP+ + H+ Y P
Sbjct: 246 EIRNISFNDKKFVIKPIDKKAHDFVFYAP 274
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 216 EVNGVVFN-KPFVEKPVSAEDHNIYIYYP 299
E+ + FN K FV KP+ + H+ Y P
Sbjct: 245 EIRNISFNDKKFVIKPIDKKAHDFVFYAP 273
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 216 EVNGVVFN-KPFVEKPVSAEDHNIYIYYP 299
E+ + FN K FV KP+ + H+ Y P
Sbjct: 245 EIRNISFNDKKFVIKPIDKKAHDFVFYAP 273
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 216 EVNGVVFN-KPFVEKPVSAEDHNIYIYYP 299
E+ + FN K FV KP+ + H+ Y P
Sbjct: 246 EIRNISFNDKKFVIKPIDKKAHDFVFYAP 274
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 216 EVNGVVFN-KPFVEKPVSAEDHNIYIYYP 299
E+ + FN K FV KP+ + H+ Y P
Sbjct: 245 EIRNISFNDKKFVIKPIDKKAHDFVFYAP 273
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 137 LYTFPFQYGVNSSTVLYVVLHMKIIYHVG 51
LY F + +S+ V+ V H K +YH G
Sbjct: 118 LYQLTFVFDCDSACVIQVHFHAKEMYHDG 146
>U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical
protein F28B4.2 protein.
Length = 860
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 126 EGIE-IPRYAVLDRDSPDPKHHELVESEDHVEVNGV 230
+G E +PRY +D D P + E+ DH+E V
Sbjct: 29 QGYEGVPRYRAIDPDRPKTESSEM-SGADHLEWESV 63
>AF039036-5|AAB94164.2| 351|Caenorhabditis elegans Hypothetical
protein E03D2.4 protein.
Length = 351
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 104 SSTVLYVVLHMKIIYHVGFP*FLVLYR 24
++T LY+ L +IY +G+ ++LYR
Sbjct: 211 ATTSLYIYLCYHLIYKIGYSSSMLLYR 237
>AF003130-12|AAB54128.2| 175|Caenorhabditis elegans Hypothetical
protein F55A12.2a protein.
Length = 175
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 125 PFQYGVNSSTVLYVVLHMKII 63
PF +GV SS V Y +LH ++
Sbjct: 72 PFVFGVYSSGVTYFMLHQVLV 92
>AF003130-11|AAM15579.1| 250|Caenorhabditis elegans Hypothetical
protein F55A12.2b protein.
Length = 250
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 125 PFQYGVNSSTVLYVVLHMKII 63
PF +GV SS V Y +LH ++
Sbjct: 72 PFVFGVYSSGVTYFMLHQVLV 92
>AF003130-9|AAP68939.1| 307|Caenorhabditis elegans Hypothetical
protein F55A12.2c protein.
Length = 307
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 125 PFQYGVNSSTVLYVVLHMKII 63
PF +GV SS V Y +LH ++
Sbjct: 129 PFVFGVYSSGVTYFMLHQVLV 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,851,077
Number of Sequences: 27780
Number of extensions: 156851
Number of successful extensions: 475
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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