Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1975
         (319 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   2.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   3.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   3.6  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   4.7  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   4.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   4.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   8.3  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -3

Query: 146 PWYLYTFPFQYGVNSSTVLYVVLHMKIIYH 57
           PW L T      VN   VL  VL +  +YH
Sbjct: 63  PWILVTLIVLAIVNVMVVLGNVLVILAVYH 92


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 258  PVSAEDHNIYIYYPTSAGGG 317
            P +AED + Y  +  S GGG
Sbjct: 1688 PETAEDISPYATFQLSEGGG 1707


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 258  PVSAEDHNIYIYYPTSAGGG 317
            P +AED + Y  +  S GGG
Sbjct: 1684 PETAEDISPYATFQLSEGGG 1703


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 120 PVWRKLFDGPVCRI 79
           P+ +KL+ GP+ RI
Sbjct: 219 PLLKKLYGGPLLRI 232


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 120 PVWRKLFDGPVCRI 79
           P+ +KL+ GP+ RI
Sbjct: 234 PLLKKLYGGPLLRI 247


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 280 LWSSADTGFSTNGLLN 233
           +W S D  FST  +LN
Sbjct: 121 VWRSLDVLFSTASILN 136


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 312 PQPTSGSKCIY 280
           P P SGSKC +
Sbjct: 62  PLPYSGSKCTW 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,119
Number of Sequences: 438
Number of extensions: 2294
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)