Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1974
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D80007-1|BAA11502.1| 1884|Homo sapiens KIAA0185 protein.               30   7.7  
BC111040-1|AAI11041.1| 1444|Homo sapiens PDCD11 protein protein.       30   7.7  
BC080560-1|AAH80560.1| 1434|Homo sapiens PDCD11 protein protein.       30   7.7  
BC064486-1|AAH64486.1| 1434|Homo sapiens PDCD11 protein protein.       30   7.7  
BC049838-1|AAH49838.1| 1436|Homo sapiens PDCD11 protein protein.       30   7.7  
AL603983-1|CAI15102.1| 1871|Homo sapiens programmed cell death 1...    30   7.7  
AL591408-6|CAI16749.1| 1871|Homo sapiens programmed cell death 1...    30   7.7  
AL139339-5|CAH71487.1| 1871|Homo sapiens programmed cell death 1...    30   7.7  

>D80007-1|BAA11502.1| 1884|Homo sapiens KIAA0185 protein.
          Length = 1884

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = -1

Query: 501  IRQFYSGRSVSRDVDLFKAVKEWKAVDVAPNTSFRI 394
            I+Q+ +G++V+  +  +  VK+W  V++AP+   RI
Sbjct: 1156 IKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRI 1191


>BC111040-1|AAI11041.1| 1444|Homo sapiens PDCD11 protein protein.
          Length = 1444

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = -1

Query: 501  IRQFYSGRSVSRDVDLFKAVKEWKAVDVAPNTSFRI 394
            I+Q+ +G++V+  +  +  VK+W  V++AP+   RI
Sbjct: 1143 IKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRI 1178


>BC080560-1|AAH80560.1| 1434|Homo sapiens PDCD11 protein protein.
          Length = 1434

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = -1

Query: 501  IRQFYSGRSVSRDVDLFKAVKEWKAVDVAPNTSFRI 394
            I+Q+ +G++V+  +  +  VK+W  V++AP+   RI
Sbjct: 1143 IKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRI 1178


>BC064486-1|AAH64486.1| 1434|Homo sapiens PDCD11 protein protein.
          Length = 1434

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = -1

Query: 501  IRQFYSGRSVSRDVDLFKAVKEWKAVDVAPNTSFRI 394
            I+Q+ +G++V+  +  +  VK+W  V++AP+   RI
Sbjct: 1143 IKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRI 1178


>BC049838-1|AAH49838.1| 1436|Homo sapiens PDCD11 protein protein.
          Length = 1436

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = -1

Query: 501  IRQFYSGRSVSRDVDLFKAVKEWKAVDVAPNTSFRI 394
            I+Q+ +G++V+  +  +  VK+W  V++AP+   RI
Sbjct: 1143 IKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRI 1178


>AL603983-1|CAI15102.1| 1871|Homo sapiens programmed cell death 11
            protein.
          Length = 1871

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = -1

Query: 501  IRQFYSGRSVSRDVDLFKAVKEWKAVDVAPNTSFRI 394
            I+Q+ +G++V+  +  +  VK+W  V++AP+   RI
Sbjct: 1143 IKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRI 1178


>AL591408-6|CAI16749.1| 1871|Homo sapiens programmed cell death 11
            protein.
          Length = 1871

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = -1

Query: 501  IRQFYSGRSVSRDVDLFKAVKEWKAVDVAPNTSFRI 394
            I+Q+ +G++V+  +  +  VK+W  V++AP+   RI
Sbjct: 1143 IKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRI 1178


>AL139339-5|CAH71487.1| 1871|Homo sapiens programmed cell death 11
            protein.
          Length = 1871

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = -1

Query: 501  IRQFYSGRSVSRDVDLFKAVKEWKAVDVAPNTSFRI 394
            I+Q+ +G++V+  +  +  VK+W  V++AP+   RI
Sbjct: 1143 IKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRI 1178


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,321,948
Number of Sequences: 237096
Number of extensions: 1806362
Number of successful extensions: 3559
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3559
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)