Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1966
(800 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 315 2e-86
03_01_0547 + 4093196-4093657,4094267-4095148 315 2e-86
03_01_0544 + 4082528-4082989,4083585-4084466 315 2e-86
03_01_0543 + 4076981-4077442,4078145-4079026 315 2e-86
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 143 2e-34
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 142 4e-34
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 137 1e-32
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 119 2e-27
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 119 2e-27
02_04_0462 + 23131433-23132836 81 1e-15
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 72 6e-13
01_02_0044 - 10559637-10560509,10562849-10563295 30 2.5
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 29 3.3
01_01_0016 - 88825-90411 29 4.3
10_01_0291 + 3010685-3010838,3010954-3011489 29 5.7
10_01_0290 + 2999775-2999928,3000281-3000816 29 5.7
10_01_0204 + 2199778-2200835,2201212-2201311 29 5.7
09_04_0232 - 15882589-15882720,15882799-15882889,15882987-158830... 29 5.7
08_02_0869 - 22031889-22032017,22032114-22032204,22032289-220323... 29 5.7
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 28 7.5
03_04_0206 - 18493178-18495310 28 7.5
03_01_0019 + 167900-168343,168567-168751,169076-169430 28 7.5
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 28 9.9
09_01_0129 - 1954470-1955129,1956285-1956371,1956475-1956663,195... 28 9.9
02_01_0772 - 5755371-5756654,5757808-5757834 28 9.9
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 315 bits (774), Expect = 2e-86
Identities = 155/240 (64%), Positives = 183/240 (76%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFE 180
ADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 181 EIKKEVSSYIKKIGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 360
EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG L
Sbjct: 169 EIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTL 216
Query: 361 IEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTE 540
+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTE
Sbjct: 217 LEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE 276
Query: 541 VKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRRGYVAGDSKNNPPXGAADFTAQVIGLN 720
VKSVEMHHEALQEA+PGD +L+RGYVA +SK++P AA FT+QVI +N
Sbjct: 277 VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMN 336
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3
Query: 720 HXGQISNGYXPVLDWHTGHIGXKFAXI 800
H GQI NGY PVLD HT HI KFA +
Sbjct: 337 HPGQIGNGYAPVLDCHTSHIAVKFAEL 363
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 315 bits (774), Expect = 2e-86
Identities = 155/240 (64%), Positives = 183/240 (76%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFE 180
ADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 181 EIKKEVSSYIKKIGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 360
EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG L
Sbjct: 169 EIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTL 216
Query: 361 IEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTE 540
+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTE
Sbjct: 217 LEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE 276
Query: 541 VKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRRGYVAGDSKNNPPXGAADFTAQVIGLN 720
VKSVEMHHEALQEA+PGD +L+RGYVA +SK++P AA FT+QVI +N
Sbjct: 277 VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMN 336
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3
Query: 720 HXGQISNGYXPVLDWHTGHIGXKFAXI 800
H GQI NGY PVLD HT HI KFA +
Sbjct: 337 HPGQIGNGYAPVLDCHTSHIAVKFAEL 363
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 315 bits (774), Expect = 2e-86
Identities = 155/240 (64%), Positives = 183/240 (76%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFE 180
ADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 181 EIKKEVSSYIKKIGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 360
EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG L
Sbjct: 169 EIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTL 216
Query: 361 IEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTE 540
+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTE
Sbjct: 217 LEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE 276
Query: 541 VKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRRGYVAGDSKNNPPXGAADFTAQVIGLN 720
VKSVEMHHEALQEA+PGD +L+RGYVA +SK++P AA FT+QVI +N
Sbjct: 277 VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMN 336
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3
Query: 720 HXGQISNGYXPVLDWHTGHIGXKFAXI 800
H GQI NGY PVLD HT HI KFA +
Sbjct: 337 HPGQIGNGYAPVLDCHTSHIAVKFAEL 363
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 315 bits (774), Expect = 2e-86
Identities = 155/240 (64%), Positives = 183/240 (76%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFE 180
ADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 181 EIKKEVSSYIKKIGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 360
EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG L
Sbjct: 169 EIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTL 216
Query: 361 IEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTE 540
+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTE
Sbjct: 217 LEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE 276
Query: 541 VKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRRGYVAGDSKNNPPXGAADFTAQVIGLN 720
VKSVEMHHEALQEA+PGD +L+RGYVA +SK++P AA FT+QVI +N
Sbjct: 277 VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMN 336
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3
Query: 720 HXGQISNGYXPVLDWHTGHIGXKFAXI 800
H GQI NGY PVLD HT HI KFA +
Sbjct: 337 HPGQIGNGYAPVLDCHTSHIAVKFAEL 363
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 143 bits (346), Expect = 2e-34
Identities = 85/237 (35%), Positives = 125/237 (52%), Gaps = 1/237 (0%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFE 180
AD VL+++A GEFE G + GQTREH LLA TLGV +L+V +NKMD + +S+ R++
Sbjct: 55 ADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVSKLVVVINKMDESTVGWSKERYD 114
Query: 181 EIKKEVSSYIKKIGYN-PXAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKC 357
EI+ ++ ++K GYN V F+PISG G NM K W G C
Sbjct: 115 EIEGKMVPFLKSSGYNVKKDVHFLPISGLLGTNMKTRMDKSN-CSWW---------SGPC 164
Query: 358 LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITT 537
L E LD I P R P+R+P+ D YK +GTV +G++E+G + G ++ P
Sbjct: 165 LFEVLDCIQVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTISEGDNMLVMPNKANV 222
Query: 538 EVKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRRGYVAGDSKNNPPXGAADFTAQV 708
+V SV + ++ A PG+ ++ G+V K NP ++F AQ+
Sbjct: 223 KVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIK-NPVSAISEFRAQL 278
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 142 bits (343), Expect = 4e-34
Identities = 84/237 (35%), Positives = 123/237 (51%), Gaps = 1/237 (0%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFE 180
AD VL+++A GEFE G K GQTREH LLA TLGV +LIV +NKMD +S+ R++
Sbjct: 100 ADIGVLVISARKGEFETGYEKGGQTREHVLLAKTLGVAKLIVVINKMDEPTVKWSKERYD 159
Query: 181 EIKKEVSSYIKKIGYN-PXAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKC 357
EI+ ++ +++ GYN V F+PISG G NM K W DG C
Sbjct: 160 EIESKMVPFLRSSGYNVKKDVHFLPISGLLGSNMKTRMDKS--ICSWW--------DGPC 209
Query: 358 LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITT 537
L E LD I P R P+R+P+ D YK +GTV +G++E+G ++ G ++ P
Sbjct: 210 LFEVLDCIEVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTIREGDSLLVMPNKTNV 267
Query: 538 EVKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRRGYVAGDSKNNPPXGAADFTAQV 708
+V + + ++ A P + ++ G+V S NP +F AQ+
Sbjct: 268 KVIGISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGFVL-SSIGNPVGAVTEFNAQL 323
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 137 bits (331), Expect = 1e-32
Identities = 76/201 (37%), Positives = 115/201 (57%), Gaps = 3/201 (1%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISKNG--QTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPR 174
+D A+L++ A G FEAG+ NG QT+EH+ L + GV LIV VNKMDS E YS+ R
Sbjct: 336 SDAAILVIDASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVVVNKMDSVE--YSKER 393
Query: 175 FEEIKKEVSSYIKKIGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGK 354
F IK ++ ++++ GY AVA+VPIS +N++ ++ W DG
Sbjct: 394 FNFIKSQLGAFLRSCGYKDSAVAWVPISAMENENLMTTASDTR-LSSWY--------DGN 444
Query: 355 CLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPANI 531
CL++A+D + PP+R KPLRLP+ DV+ +G V + G+VE G + G+ ++ P
Sbjct: 445 CLLKAIDTLPPPSRDVSKPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMPFGE 504
Query: 532 TTEVKSVEMHHEALQEAVPGD 594
VK++E + + A GD
Sbjct: 505 LAVVKTIERNSSSCNLARAGD 525
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 119 bits (287), Expect = 2e-27
Identities = 73/204 (35%), Positives = 113/204 (55%), Gaps = 6/204 (2%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISKNG-----QTREHALLAFTLGVKQLIVXVNKMDSTEPPYS 165
AD A+L+V A TG FEAG+ G QT+EHA L + GV+QLIV VNKMD+ YS
Sbjct: 349 ADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI--GYS 406
Query: 166 EPRFEEIKKEVSSYIKKIGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKA 345
+ RFE IK ++ S+++ + +V ++P+S N+++ + + +Q
Sbjct: 407 KERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQ-------- 458
Query: 346 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGT-VPVGRVETGVLKPGTIVVFAP 522
G CL++A+D++ P+R KPL LP+ DV K G G++ETG ++ G+ V+ +P
Sbjct: 459 -GFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISP 517
Query: 523 ANITTEVKSVEMHHEALQEAVPGD 594
VKS+E + A GD
Sbjct: 518 CGEVAAVKSIERDSNSCDIARAGD 541
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 119 bits (287), Expect = 2e-27
Identities = 73/204 (35%), Positives = 113/204 (55%), Gaps = 6/204 (2%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISKNG-----QTREHALLAFTLGVKQLIVXVNKMDSTEPPYS 165
AD A+L+V A TG FEAG+ G QT+EHA L + GV+QLIV VNKMD+ YS
Sbjct: 349 ADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI--GYS 406
Query: 166 EPRFEEIKKEVSSYIKKIGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKA 345
+ RFE IK ++ S+++ + +V ++P+S N+++ + + +Q
Sbjct: 407 KERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQ-------- 458
Query: 346 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGT-VPVGRVETGVLKPGTIVVFAP 522
G CL++A+D++ P+R KPL LP+ DV K G G++ETG ++ G+ V+ +P
Sbjct: 459 -GFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISP 517
Query: 523 ANITTEVKSVEMHHEALQEAVPGD 594
VKS+E + A GD
Sbjct: 518 CGEVAAVKSIERDSNSCDIARAGD 541
>02_04_0462 + 23131433-23132836
Length = 467
Score = 80.6 bits (190), Expect = 1e-15
Identities = 69/239 (28%), Positives = 102/239 (42%), Gaps = 3/239 (1%)
Frame = +1
Query: 4 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEE 183
D A+L+V+ G QT+EH LLA +GV +++V +NK D + E +
Sbjct: 158 DGAILVVSGADGPMP-------QTKEHILLAKQVGVPKIVVFLNKKDQVD---DEELLQL 207
Query: 184 IKKEVSSYIKKIGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLI 363
++ EV + Y+ V PI LE P K E +G LI
Sbjct: 208 VELEVRELLSSYEYDGDEV---PIVAGSALKALENLMANPAIKRGDDEWVDGIFS---LI 261
Query: 364 EALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTE 540
+++D +P P R TD P L ++DV+ I G GTV GR+E G +K G V T
Sbjct: 262 DSVDNYIPVPQRQTDLPFLLAVEDVFSITGRGTVATGRIERGTVKVGDTVDIVGIRETRN 321
Query: 541 --VKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRRGYVAGDSKNNPPXGAADFTAQVI 711
V VEM + + +A+ GD ++ RG V + P D V+
Sbjct: 322 CTVTGVEMFQKTMDDAMAGDNVGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVL 380
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 71.7 bits (168), Expect = 6e-13
Identities = 60/199 (30%), Positives = 89/199 (44%), Gaps = 5/199 (2%)
Frame = +1
Query: 70 QTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPXAVAFV 249
QT+EH LLA +GV L+ +NK+D+ + P E +E+ S+ K G +
Sbjct: 170 QTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGS 229
Query: 250 PISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILP-PARPTDKPLRLPL 426
+S G N + GK L++A+D +P P R DK +P+
Sbjct: 230 ALSALQGTN-----------------DEIGKNAILKLMDAVDEYIPDPVRQLDKSFLMPI 272
Query: 427 QDVYKIGGIGTVPVGRVETGVLKPG---TIVVFAPAN-ITTEVKSVEMHHEALQEAVPGD 594
+DV+ I G GTV GRVE G +K G I+ P+ + T V VEM + L GD
Sbjct: 273 EDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGEAGD 332
Query: 595 XXXXXXXXXXXXELRRGYV 651
+++RG V
Sbjct: 333 NVGLLLRGLKRGDVQRGQV 351
>01_02_0044 - 10559637-10560509,10562849-10563295
Length = 439
Score = 29.9 bits (64), Expect = 2.5
Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 6/152 (3%)
Frame = +1
Query: 64 NGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSE--PRFEEIKKEVSSYIKKIGYNPXA 237
+G+ E +++ +G++ L+ ++ + P + P + KE + Y P A
Sbjct: 23 SGELLELSIIDRVVGLRHLVRSLHIFSAAAPSGGDAKPSPARVIKEALGKAL-VDYYPFA 81
Query: 238 VAFVPISGWHGDNMLEPSTKMPWF----KGWQVERKEGKADGKCLIEALDAILPPARPTD 405
FV G G +E + + WF G ++ G D +I D +LP A P
Sbjct: 82 GRFVDGGGGPGSARVECTGEGAWFVEAAAGCSLDDVNG-LDHPLMIPE-DDLLPDAAPGV 139
Query: 406 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 501
PL LPL G VG + + G
Sbjct: 140 HPLDLPLMMQVTEFSCGGFVVGLISVHTMADG 171
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1
Query: 139 MDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPXAV------AFVPISGWHGDNMLEPSTK 297
M STEP + + + EV IKK+GYN + A+ G+H N PS++
Sbjct: 322 MSSTEPKINT--YANFRDEVLPRIKKLGYNAVQIMAIQEHAYYGSFGYHVTNFFAPSSR 378
>01_01_0016 - 88825-90411
Length = 528
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 126 YDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSA 7
YD F + +G+L L+V+ F+ TGT + D+H A
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>10_01_0291 + 3010685-3010838,3010954-3011489
Length = 229
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -1
Query: 428 CRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCHPE 255
C G+ V + G + A H+PSAL + + C P+ + I+ P PE
Sbjct: 105 CPGQEPSKIVPMSEGTFIAVAGQTHYPSALCASATICGPIKKKIIDHFHKKPVPPKPE 162
>10_01_0290 + 2999775-2999928,3000281-3000816
Length = 229
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -1
Query: 428 CRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCHPE 255
C G+ V + G + A H+PSAL + + C P+ + I+ P PE
Sbjct: 105 CPGQEPSKIVPMSEGTFVAIAGKTHYPSALCASATICGPIKKKIIDHFHKKPVPPKPE 162
>10_01_0204 + 2199778-2200835,2201212-2201311
Length = 385
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -1
Query: 482 VSTLPTGTVP-IPPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHP 312
+S +P +V + + S R RRR ++ RAG R+ SRA +R PS S+ HP
Sbjct: 202 ISFVPCPSVSSVRSAIVFSARRRRRQSAIARAGARV-SRAGVR--PSPASSILVGVHP 256
>09_04_0232 -
15882589-15882720,15882799-15882889,15882987-15883087,
15883494-15883592,15883693-15883830,15883918-15884508,
15884819-15884989,15885068-15885203,15885561-15885592,
15886280-15886336,15886434-15886686,15886762-15886850,
15887181-15887234,15887498-15887689,15887777-15887938
Length = 765
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 216 DWLQPXCCRFRAHFWMARRQHVGAFNQNALVQGM 317
DW+ C AHF RRQ +G F A G+
Sbjct: 697 DWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGL 730
>08_02_0869 -
22031889-22032017,22032114-22032204,22032289-22032389,
22033262-22033303,22033393-22033491,22033616-22033753,
22033853-22034428,22034897-22035070,22035155-22035290,
22035694-22035725,22036873-22037125,22037216-22037304,
22037771-22037824,22038801-22038992,22039065-22039229
Length = 756
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 216 DWLQPXCCRFRAHFWMARRQHVGAFNQNALVQGM 317
DW+ C AHF RRQ +G F A G+
Sbjct: 689 DWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGL 722
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 192 LLDFLKSGLTVWWFSGIHFVY 130
+L+ GL VW GIHFVY
Sbjct: 234 ILEIKTGGLVVWTRGGIHFVY 254
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 130 VNKMDSTEPPYSEPRFEEIKKEV 198
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>03_01_0019 + 167900-168343,168567-168751,169076-169430
Length = 327
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -1
Query: 524 AGAKTTMVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPS 345
+ + + P PV+ PT T P PPI + G G S G GG + +RA+ P+
Sbjct: 48 SSSSNSSTPSIPPPVA--PTPTAPTPPI-PSPGTGSSNGSSGGGGGGWLNARATWYGAPN 104
>10_01_0097 -
1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 350 ENASLKLSMPSCHLPAPLTSPCVFPCKTYTKS 445
E A++ +S P LP P P +FP + T+S
Sbjct: 21 EEAAVVVSQPQKTLPVPTAGPSLFPQQEVTQS 52
>09_01_0129 -
1954470-1955129,1956285-1956371,1956475-1956663,
1956772-1956900,1957386-1957472,1957572-1958036,
1959844-1959923,1961295-1961358,1961444-1961455
Length = 590
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = -3
Query: 255 NGHESDSXWVVANLLDV*GYFLLDFLKSGLTVWWFSGI-----HFVY 130
NGH + +V++N L Y LL + G ++ SG+ HFVY
Sbjct: 379 NGHYGVTTFVISNTLSSTPYLLLIAIIPGAIAYYLSGLQRQIEHFVY 425
>02_01_0772 - 5755371-5756654,5757808-5757834
Length = 436
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 449 PPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPL 309
PP+ ++C R G A R+ RA A PSLR++ HPL
Sbjct: 8 PPVDSSACLCRVERSVAGAAAARLMPRAKA----CAQPSLRASIHPL 50
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.134 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,417,370
Number of Sequences: 37544
Number of extensions: 526638
Number of successful extensions: 1375
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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