Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1962
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 149 2e-36
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 149 2e-36
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 113 1e-25
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 113 1e-25
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 113 1e-25
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 62 3e-10
U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical pr... 53 3e-07
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 47 1e-05
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 40 0.002
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 40 0.002
AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated... 40 0.002
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 40 0.002
U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family ... 37 0.015
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p... 37 0.015
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p... 37 0.015
U41027-5|AAC48195.1| 314|Caenorhabditis elegans Hypothetical pr... 32 0.55
AF016446-6|AAC24162.1| 322|Caenorhabditis elegans Serpentine re... 31 1.3
Z70038-4|CAA93881.1| 427|Caenorhabditis elegans Hypothetical pr... 30 1.7
U58756-5|AAY44006.1| 288|Caenorhabditis elegans Hypothetical pr... 29 2.9
U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal glan... 29 5.1
AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical ... 29 5.1
U58756-6|AAY44007.1| 286|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical... 28 6.8
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 28 8.9
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 28 8.9
AF067945-1|AAC17679.1| 312|Caenorhabditis elegans Serpentine re... 28 8.9
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 149 bits (361), Expect = 2e-36
Identities = 80/216 (37%), Positives = 114/216 (52%), Gaps = 12/216 (5%)
Frame = +2
Query: 38 RECNNPEPVNNGNYCIGDRSRYKVCNTDPCPINEPSFREVQCSRHNNMPYKNE----TID 205
R+C++P+P N G YC+G R RY+ CNT CP + +REVQCS NN + T
Sbjct: 628 RDCDSPKPRNGGKYCVGQRERYRSCNTQECPWDTQPYREVQCSEFNNKDIGIQGVASTNT 687
Query: 206 EWVPYFDQDKP---CELQCVPRDGTDVEMLGGFVADGTPCRQAIGSRDMCISGVCYKVGC 376
WVP + P C+L C +L V DGTPC + D+C++G C GC
Sbjct: 688 HWVPKYANVAPNERCKLYCRLSGSAAFYLLRDKVVDGTPCDR--NGDDICVAGACMPAGC 745
Query: 377 DWIVDSDVEEDACGVCGGDGTACKTVQGIYTKGTTRQSGFSEVAIIPAGSRNVKIQEK-- 550
D + S + D CGVCGGD ++CK V+G + + T G++EV IPAGS N+ I++K
Sbjct: 746 DHQLHSTLRRDKCGVCGGDDSSCKVVKGTFNEQGT--FGYNEVMKIPAGSANIDIRQKGY 803
Query: 551 ---VSPGNYISIGSTKSRXMFLNGARNATLTEYFVA 649
NY+S+ + + LNG +L +A
Sbjct: 804 NNMKEDDNYLSLRAANGEFL-LNGHFQVSLARQQIA 838
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 149 bits (361), Expect = 2e-36
Identities = 80/216 (37%), Positives = 114/216 (52%), Gaps = 12/216 (5%)
Frame = +2
Query: 38 RECNNPEPVNNGNYCIGDRSRYKVCNTDPCPINEPSFREVQCSRHNNMPYKNE----TID 205
R+C++P+P N G YC+G R RY+ CNT CP + +REVQCS NN + T
Sbjct: 628 RDCDSPKPRNGGKYCVGQRERYRSCNTQECPWDTQPYREVQCSEFNNKDIGIQGVASTNT 687
Query: 206 EWVPYFDQDKP---CELQCVPRDGTDVEMLGGFVADGTPCRQAIGSRDMCISGVCYKVGC 376
WVP + P C+L C +L V DGTPC + D+C++G C GC
Sbjct: 688 HWVPKYANVAPNERCKLYCRLSGSAAFYLLRDKVVDGTPCDR--NGDDICVAGACMPAGC 745
Query: 377 DWIVDSDVEEDACGVCGGDGTACKTVQGIYTKGTTRQSGFSEVAIIPAGSRNVKIQEK-- 550
D + S + D CGVCGGD ++CK V+G + + T G++EV IPAGS N+ I++K
Sbjct: 746 DHQLHSTLRRDKCGVCGGDDSSCKVVKGTFNEQGT--FGYNEVMKIPAGSANIDIRQKGY 803
Query: 551 ---VSPGNYISIGSTKSRXMFLNGARNATLTEYFVA 649
NY+S+ + + LNG +L +A
Sbjct: 804 NNMKEDDNYLSLRAANGEFL-LNGHFQVSLARQQIA 838
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
protein C37C3.6c protein.
Length = 1487
Score = 113 bits (272), Expect = 1e-25
Identities = 62/178 (34%), Positives = 89/178 (50%)
Frame = +2
Query: 80 CIGDRSRYKVCNTDPCPINEPSFREVQCSRHNNMPYKNETIDEWVPYFDQDKPCELQCVP 259
C G RY CN + C + FR QCS+ N+ +W PY ++K CEL C P
Sbjct: 107 CTGASVRYISCNLNACE-SGTDFRAEQCSKFNDEALDGN-YHKWTPYKGKNK-CELVCKP 163
Query: 260 RDGTDVEMLGGFVADGTPCRQAIGSRDMCISGVCYKVGCDWIVDSDVEEDACGVCGGDGT 439
G V DGT C S D+C+ G C VGCD + S ++ D CG C GDG+
Sbjct: 164 ESGNFYYKWADKVVDGTKCDSK--SNDICVDGECLPVGCDGKLGSSLKFDKCGKCDGDGS 221
Query: 440 ACKTVQGIYTKGTTRQSGFSEVAIIPAGSRNVKIQEKVSPGNYISIGSTKSRXMFLNG 613
CKT++G + + G+ ++ +P G+ N+KIQE N +++ S +LNG
Sbjct: 222 TCKTIEGRFDE-RNLSPGYHDIIKLPEGATNIKIQEARKSTNNLAL-KNGSDHFYLNG 277
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
protein C37C3.6a protein.
Length = 1558
Score = 113 bits (272), Expect = 1e-25
Identities = 62/178 (34%), Positives = 89/178 (50%)
Frame = +2
Query: 80 CIGDRSRYKVCNTDPCPINEPSFREVQCSRHNNMPYKNETIDEWVPYFDQDKPCELQCVP 259
C G RY CN + C + FR QCS+ N+ +W PY ++K CEL C P
Sbjct: 107 CTGASVRYISCNLNACE-SGTDFRAEQCSKFNDEALDGN-YHKWTPYKGKNK-CELVCKP 163
Query: 260 RDGTDVEMLGGFVADGTPCRQAIGSRDMCISGVCYKVGCDWIVDSDVEEDACGVCGGDGT 439
G V DGT C S D+C+ G C VGCD + S ++ D CG C GDG+
Sbjct: 164 ESGNFYYKWADKVVDGTKCDSK--SNDICVDGECLPVGCDGKLGSSLKFDKCGKCDGDGS 221
Query: 440 ACKTVQGIYTKGTTRQSGFSEVAIIPAGSRNVKIQEKVSPGNYISIGSTKSRXMFLNG 613
CKT++G + + G+ ++ +P G+ N+KIQE N +++ S +LNG
Sbjct: 222 TCKTIEGRFDE-RNLSPGYHDIIKLPEGATNIKIQEARKSTNNLAL-KNGSDHFYLNG 277
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
protein C37C3.6b protein.
Length = 2167
Score = 113 bits (272), Expect = 1e-25
Identities = 62/178 (34%), Positives = 89/178 (50%)
Frame = +2
Query: 80 CIGDRSRYKVCNTDPCPINEPSFREVQCSRHNNMPYKNETIDEWVPYFDQDKPCELQCVP 259
C G RY CN + C + FR QCS+ N+ +W PY ++K CEL C P
Sbjct: 107 CTGASVRYISCNLNACE-SGTDFRAEQCSKFNDEALDGN-YHKWTPYKGKNK-CELVCKP 163
Query: 260 RDGTDVEMLGGFVADGTPCRQAIGSRDMCISGVCYKVGCDWIVDSDVEEDACGVCGGDGT 439
G V DGT C S D+C+ G C VGCD + S ++ D CG C GDG+
Sbjct: 164 ESGNFYYKWADKVVDGTKCDSK--SNDICVDGECLPVGCDGKLGSSLKFDKCGKCDGDGS 221
Query: 440 ACKTVQGIYTKGTTRQSGFSEVAIIPAGSRNVKIQEKVSPGNYISIGSTKSRXMFLNG 613
CKT++G + + G+ ++ +P G+ N+KIQE N +++ S +LNG
Sbjct: 222 TCKTIEGRFDE-RNLSPGYHDIIKLPEGATNIKIQEARKSTNNLAL-KNGSDHFYLNG 277
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 62.5 bits (145), Expect = 3e-10
Identities = 44/122 (36%), Positives = 52/122 (42%)
Frame = +2
Query: 80 CIGDRSRYKVCNTDPCPINEPSFREVQCSRHNNMPYKNETIDEWVPYFDQDKPCELQCVP 259
C G+ R+KVC C R+ C E + CE+ C
Sbjct: 55 CSGESVRFKVCAQKTCESKSRLARDTICG-------GEEIVSR--------GQCEVVCRS 99
Query: 260 RDGTDVEMLGGFVADGTPCRQAIGSRDMCISGVCYKVGCDWIVDSDVEEDACGVCGGDGT 439
R T L V DGTPC QA SR +C G C VGCD ++ S DACGVCGG G
Sbjct: 100 R-LTGANFLWR-VDDGTPC-QAATSRAVCSKGSCQIVGCDGLISSSFRFDACGVCGGRGD 156
Query: 440 AC 445
C
Sbjct: 157 TC 158
>U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical
protein T19D2.1 protein.
Length = 872
Score = 52.8 bits (121), Expect = 3e-07
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Frame = +2
Query: 38 RECNNPEPVNNGNYCIGDRSRYKVCNTDPCPINE-PSFREVQCSR-HNNMPYKNETIDEW 211
R+CNNP N G C GD +R VC+ D C + ++ CSR + N +
Sbjct: 478 RQCNNPSSNNGGAPCQGDEARGMVCHRDVCNGDSIENYATRVCSRLRDENAIPNTILSGE 537
Query: 212 VPYFDQDKPCELQCVPRDGTDVEMLGGFVADGTPCRQAIGSRDMCISGVCYKVGC 376
F+Q C++ C+ T++ + F DG PC G CI G C + C
Sbjct: 538 GMQFEQ-AMCKIWCLISGSTNIRTVSNF-PDGAPC----GPGQYCIKGECRPLLC 586
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Frame = +2
Query: 32 QSRECNNPEPVNNGNYCIGDRSRYKVC---NTDPCPINEPSFREVQCSRHNNMPYKNETI 202
Q R+C NP P N G C G R VC +++ F CS P+K +
Sbjct: 575 QHRDCVNPAPNNGGKTCEGANIRGIVCGATSSNCLGFTREEFGNKICSSIKYDPHKPDQQ 634
Query: 203 DEWVPYFDQDKPCELQCVPRDGTDVEMLGGFVADGTPCRQAIGSRDMCISGVCYKVGCD 379
+ +PC + C G+++ G DGTPC G C+ G C + CD
Sbjct: 635 LTGEGFEHSTQPCRVWC-HLIGSELIRNKGQFPDGTPC----GFDAYCVGGQCLALSCD 688
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Frame = +2
Query: 32 QSRECNNPEPVNNGNYCIGDRSRYKVC---NTDPCPINEPSFREVQCSRHNNMPYKNETI 202
Q R+C NP P N G C G R VC +++ F CS P+K +
Sbjct: 575 QHRDCVNPAPNNGGKTCEGANIRGIVCGATSSNCLGFTREEFGNKICSSIKYDPHKPDQQ 634
Query: 203 DEWVPYFDQDKPCELQCVPRDGTDVEMLGGFVADGTPCRQAIGSRDMCISGVCYKVGCD 379
+ +PC + C G+++ G DGTPC G C+ G C + CD
Sbjct: 635 LTGEGFEHSTQPCRVWC-HLIGSELIRNKGQFPDGTPC----GFDAYCVGGQCLALSCD 688
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Frame = +2
Query: 32 QSRECNNPEPVNNGNYCIGDRSRYKVC---NTDPCPINEPSFREVQCSRHNNMPYKNETI 202
Q R+C NP P N G C G R VC +++ F CS P+K +
Sbjct: 575 QHRDCVNPAPNNGGKTCEGANIRGIVCGATSSNCLGFTREEFGNKICSSIKYDPHKPDQQ 634
Query: 203 DEWVPYFDQDKPCELQCVPRDGTDVEMLGGFVADGTPCRQAIGSRDMCISGVCYKVGCD 379
+ +PC + C G+++ G DGTPC G C+ G C + CD
Sbjct: 635 LTGEGFEHSTQPCRVWC-HLIGSELIRNKGQFPDGTPC----GFDAYCVGGQCLALSCD 688
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 17 LXXSTQSRECNNPEPVNNGNYCIGDRSRYKVCNTDPCPIN 136
L ++R CNNP P+N+G YC G+ + C PC ++
Sbjct: 236 LPHQRRTRTCNNPAPLNDGEYCKGEEEMTRSCKV-PCKLD 274
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 32 QSRECNNPEPVNNGNYCIGDRSRYKVCNTDPC 127
++R C P P+N G C GD + C C
Sbjct: 294 RTRACTVPPPMNGGQPCFGDDLMTQECPAQLC 325
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 17 LXXSTQSRECNNPEPVNNGNYCIGDRSRYKVCNTDPCPIN 136
L ++R CNNP P+N+G YC G+ + C PC ++
Sbjct: 264 LPHQRRTRTCNNPAPLNDGEYCKGEEEMTRSCKV-PCKLD 302
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 32 QSRECNNPEPVNNGNYCIGDRSRYKVCNTDPC 127
++R C P P+N G C GD + C C
Sbjct: 322 RTRACTVPPPMNGGQPCFGDDLMTQECPAQLC 353
>AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated
protein 5, isoform b protein.
Length = 567
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 17 LXXSTQSRECNNPEPVNNGNYCIGDRSRYKVCNTDPCPIN 136
L ++R CNNP P+N+G YC G+ + C PC ++
Sbjct: 236 LPHQRRTRTCNNPAPLNDGEYCKGEEEMTRSCKV-PCKLD 274
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 32 QSRECNNPEPVNNGNYCIGDRSRYKVCNTDPC 127
++R C P P+N G C GD + C C
Sbjct: 294 RTRACTVPPPMNGGQPCFGDDLMTQECPAQLC 325
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 17 LXXSTQSRECNNPEPVNNGNYCIGDRSRYKVCNTDPCPIN 136
L ++R CNNP P+N+G YC G+ + C PC ++
Sbjct: 236 LPHQRRTRTCNNPAPLNDGEYCKGEEEMTRSCKV-PCKLD 274
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 32 QSRECNNPEPVNNGNYCIGDRSRYKVCNTDPC 127
++R C P P+N G C GD + C C
Sbjct: 294 RTRACTVPPPMNGGQPCFGDDLMTQECPAQLC 325
>U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family
protein 2, isoform c protein.
Length = 975
Score = 37.1 bits (82), Expect = 0.015
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Frame = +2
Query: 8 LAALXXSTQSRECNNPEPVNNGNYCIGDRSRYKVCNTDPCPINEPSFREV---QCSRHNN 178
L ++ + R C+ P P N G+ C+G SR +C+ C S E +C
Sbjct: 549 LGSVGLAIARRTCSAPYPANGGSDCVGSTSRAVLCSRQ-CGRASKSVDEYISDKCMEQKR 607
Query: 179 MPYKNETIDE--WVPYFDQDKPCELQCVPRDGTDVEMLGGFVADGTPCRQAIGSRDMCIS 352
+ E + + F Q + C++ C + + F D P + G C+
Sbjct: 608 LKNDRELTGKGSQLNRFPQ-RACKVFCDVQQHYGSQRNYRFFGDNLPDGTSCGYDRYCLD 666
Query: 353 GVCYKVGCD 379
G C + C+
Sbjct: 667 GECLALNCN 675
>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
protein 2, isoform a protein.
Length = 1020
Score = 37.1 bits (82), Expect = 0.015
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Frame = +2
Query: 8 LAALXXSTQSRECNNPEPVNNGNYCIGDRSRYKVCNTDPCPINEPSFREV---QCSRHNN 178
L ++ + R C+ P P N G+ C+G SR +C+ C S E +C
Sbjct: 549 LGSVGLAIARRTCSAPYPANGGSDCVGSTSRAVLCSRQ-CGRASKSVDEYISDKCMEQKR 607
Query: 179 MPYKNETIDE--WVPYFDQDKPCELQCVPRDGTDVEMLGGFVADGTPCRQAIGSRDMCIS 352
+ E + + F Q + C++ C + + F D P + G C+
Sbjct: 608 LKNDRELTGKGSQLNRFPQ-RACKVFCDVQQHYGSQRNYRFFGDNLPDGTSCGYDRYCLD 666
Query: 353 GVCYKVGCD 379
G C + C+
Sbjct: 667 GECLALNCN 675
>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
protease protein.
Length = 1020
Score = 37.1 bits (82), Expect = 0.015
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Frame = +2
Query: 8 LAALXXSTQSRECNNPEPVNNGNYCIGDRSRYKVCNTDPCPINEPSFREV---QCSRHNN 178
L ++ + R C+ P P N G+ C+G SR +C+ C S E +C
Sbjct: 549 LGSVGLAIARRTCSAPYPANGGSDCVGSTSRAVLCSRQ-CGRASKSVDEYISDKCMEQKR 607
Query: 179 MPYKNETIDE--WVPYFDQDKPCELQCVPRDGTDVEMLGGFVADGTPCRQAIGSRDMCIS 352
+ E + + F Q + C++ C + + F D P + G C+
Sbjct: 608 LKNDRELTGKGSQLNRFPQ-RACKVFCDVQQHYGSQRNYRFFGDNLPDGTSCGYDRYCLD 666
Query: 353 GVCYKVGCD 379
G C + C+
Sbjct: 667 GECLALNCN 675
>U41027-5|AAC48195.1| 314|Caenorhabditis elegans Hypothetical
protein R08E3.2 protein.
Length = 314
Score = 31.9 bits (69), Expect = 0.55
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +2
Query: 290 GFVADGTPCRQAIGSRDMCISGVCYKVGCDWIVDSDVEEDACGVC--GGDGTACKTVQGI 463
GF+ DG+ A + + C+ C G D S + D C +C G G C+ V+ +
Sbjct: 83 GFLKDGSCVCTADYNSNSCLKRKCRNFGFDGQSFSSNKVDRC-ICPPGFLGRNCEPVKCV 141
Query: 464 YTKGTTRQSGFSEVAIIPAGSRNVKIQEKVSPGN 565
S SE +I S N K+ E GN
Sbjct: 142 PGSNQAYSSSNSEKSISLLASFNTKMAETWQTGN 175
>AF016446-6|AAC24162.1| 322|Caenorhabditis elegans Serpentine
receptor, class h protein20 protein.
Length = 322
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2
Query: 292 SSQHLHVSTIARHTL*LARFILIKVGNPFIYSFILIWHVI 173
S +H+ T + L L I IK IY F LIWHV+
Sbjct: 14 SLHSVHLITFPTYALALFSLIFIKTKIFAIYRFFLIWHVL 53
>Z70038-4|CAA93881.1| 427|Caenorhabditis elegans Hypothetical
protein ZK1067.5 protein.
Length = 427
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 336 GTCAFLVCATK*VVIGLLILTLKKTHAASVGATEQHVKLCKGFTRKAQLD 485
GT +++C+ + IGL++ TL + SVG + H + +GF L+
Sbjct: 343 GTVEYMLCSIVFIFIGLILTTLAVDVSGSVGIAKMH-SIGRGFDAMKMLN 391
>U58756-5|AAY44006.1| 288|Caenorhabditis elegans Hypothetical
protein F58F9.8 protein.
Length = 288
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 80 CIGDRSRYKVCNTDPCPINEPSFREVQCSRHNNMPYKNETIDEWVPY-FDQDKPCELQCV 256
C+GD +RY +CNT C P+ R C + +P + P+ D + E C
Sbjct: 68 CVGDTTRYILCNTKTCVY--PAQRTC-CIPY--VPMIINGTSQCGPFPKDTGRSSEAPCC 122
Query: 257 PRDG 268
P+DG
Sbjct: 123 PKDG 126
>U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal gland
toxin-relatedprotein 1 protein.
Length = 294
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 529 PRTCRYNCNLTES*LSSCAFRVNPLHSFTCC 437
PRTC CN T + +SC RVNP + C
Sbjct: 122 PRTCG-RCNSTSTSSTSCVDRVNPSTGVSDC 151
>AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical
protein Y37H2A.1 protein.
Length = 477
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 354 PEMHMSRDPIACLQGVPSATNPPNISTSVPSRGTHCNSHG 235
P MH SR P L P + P N S +P RGT+ +++G
Sbjct: 89 PTMHHSRPPPPPLDRRPMS--PQNASRPLPVRGTNYSTNG 126
>U58756-6|AAY44007.1| 286|Caenorhabditis elegans Hypothetical
protein F58F9.9 protein.
Length = 286
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 80 CIGDRSRYKVCNTDPCPINEPSFREVQCSRHNNMPYKNETIDEWVPY-FDQDKPCELQCV 256
C+GD +RY CNT C P+ R C + +P + P+ D + E C
Sbjct: 68 CVGDTTRYIPCNTKTCVY--PAQRTC-CIPY--VPMIINGTSQCGPFPKDTGRSSEAPCC 122
Query: 257 PRDG 268
P+DG
Sbjct: 123 PKDG 126
>AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical
protein Y39G10AR.3 protein.
Length = 998
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 711 LAEI*KFINVYSRGRLRNPGVHTSTRXT 794
+ E+ + Y+ GR+RN G+H TR T
Sbjct: 33 MTELKDMLKQYTAGRIRNLGLHIQTRDT 60
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical
protein F32H2.5 protein.
Length = 2586
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 314 CRQAIGSRDMCISGVCYKVGC--DWIVDSDVEEDACGVCGGDGTACKTVQGIYTKGTTRQ 487
C AI + + ++ V +G D I+ E CG G T +T++ Y +GTT
Sbjct: 565 CMLAITAIQIALTDVLTALGVSPDGIIGHSTGEMGCGYADGGITREQTMRLAYHRGTTIM 624
Query: 488 SGFSEV--AIIPAGSRNVKIQEKVSPG 562
+E+ A+ G +++E+ PG
Sbjct: 625 K-HTEIKGAMAAVGLTWEQVKEQAPPG 650
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Frame = +2
Query: 380 WIVDSDVEEDACGVCGGDGTACKTVQGIYTKGTTRQSGFSEVAIIPAGSRNV--KIQEKV 553
W+ D+ CG+C G AC V KGT G E + G ++ E
Sbjct: 675 WLTDTPSVCAQCGLCSARGVACGRVP--RPKGTMCHCGVGESTCLRCGLCRPCGEVTEPA 732
Query: 554 SPG--NYISIGST 586
PG ++ ST
Sbjct: 733 QPGRAQHVQFSST 745
>AF067945-1|AAC17679.1| 312|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 31 protein.
Length = 312
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -2
Query: 211 PFIYSFILIWHVI 173
PF+YSFIL+W V+
Sbjct: 175 PFLYSFILVWMVV 187
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Frame = +2
Query: 380 WIVDSDVEEDACGVCGGDGTACKTVQGIYTKGTTRQSGFSEVAIIPAGSRNV--KIQEKV 553
W+ D+ CG+C G AC V KGT G E + G ++ E
Sbjct: 675 WLTDTPSVCAQCGLCSARGVACGRVP--RPKGTMCHCGVGESTCLRCGLCRPCGEVTEPA 732
Query: 554 SPG--NYISIGST 586
PG ++ ST
Sbjct: 733 QPGRAQHVQFSST 745
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,990,448
Number of Sequences: 27780
Number of extensions: 434832
Number of successful extensions: 1224
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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