Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1961
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical... 42 5e-04
AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical... 39 0.003
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ... 39 0.004
AF036706-7|AAK39282.1| 562|Caenorhabditis elegans Hypothetical ... 28 6.2
>Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical
protein T07F10.1b protein.
Length = 976
Score = 61.7 bits (143), Expect = 5e-10
Identities = 36/103 (34%), Positives = 53/103 (51%)
Frame = +3
Query: 57 SKTTPLVWMKNVKELTINDMPTKDKFIIINPEEIAPYLVNYDKDTWYLLSKFLQSEKRTQ 236
S + WMK + L I DK +IIN E Y Y W +S+ L+ E Q
Sbjct: 598 SSELEMKWMKRNEPLIIKS----DKNVIINAESNGFYRAGYSSGLWKEISEMLK-ENHEQ 652
Query: 237 IPAITRAKLLHDAWNLAYAGELSFATALNMTLFLKTEEDHLVW 365
TR +L+ D++ LA AG LS++ LN+ +LK E+++L W
Sbjct: 653 FSPQTRVRLIDDSFALARAGLLSYSIPLNLITYLKNEKEYLPW 695
>Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical
protein T07F10.1a protein.
Length = 988
Score = 61.7 bits (143), Expect = 5e-10
Identities = 36/103 (34%), Positives = 53/103 (51%)
Frame = +3
Query: 57 SKTTPLVWMKNVKELTINDMPTKDKFIIINPEEIAPYLVNYDKDTWYLLSKFLQSEKRTQ 236
S + WMK + L I DK +IIN E Y Y W +S+ L+ E Q
Sbjct: 610 SSELEMKWMKRNEPLIIKS----DKNVIINAESNGFYRAGYSSGLWKEISEMLK-ENHEQ 664
Query: 237 IPAITRAKLLHDAWNLAYAGELSFATALNMTLFLKTEEDHLVW 365
TR +L+ D++ LA AG LS++ LN+ +LK E+++L W
Sbjct: 665 FSPQTRVRLIDDSFALARAGLLSYSIPLNLITYLKNEKEYLPW 707
>Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical
protein AC3.5 protein.
Length = 1090
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/96 (33%), Positives = 51/96 (53%)
Frame = +3
Query: 78 WMKNVKELTINDMPTKDKFIIINPEEIAPYLVNYDKDTWYLLSKFLQSEKRTQIPAITRA 257
W+ L +N T D I +N + Y VNY++ W ++K L+ + ++ TRA
Sbjct: 713 WLHEAFRLPLN---TSDS-IYLNTDSNGVYRVNYEEKRWNDIAKQLE-KSHGKLSERTRA 767
Query: 258 KLLHDAWNLAYAGELSFATALNMTLFLKTEEDHLVW 365
+L+ D + LA +G L F TALN+T +L E + W
Sbjct: 768 RLISDVFALANSGALPFETALNVTSYLPMETATVPW 803
>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/85 (27%), Positives = 45/85 (52%)
Frame = +3
Query: 120 TKDKFIIINPEEIAPYLVNYDKDTWYLLSKFLQSEKRTQIPAITRAKLLHDAWNLAYAGE 299
T + ++I+N + + V YD +T+ L K LQ T I I R+ +L D+++L+
Sbjct: 721 TSNDWLILNTGGVGYFKVLYDPETYRKLVKQLQ-RNHTTISPIDRSMILVDSFDLSKTSL 779
Query: 300 LSFATALNMTLFLKTEEDHLVWEAV 374
L+ + ++ +++ E D + W V
Sbjct: 780 LNISVYFDLLEYVEKETDKMTWSIV 804
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical protein
T16G12.1 protein.
Length = 1890
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +3
Query: 171 VNYDKDTWYLLSKFLQSEKRTQIPAITRAKLLHDAWNLAYAGELSFATALNMTLFLKTEE 350
+NYD +WY + L S T + + TRA LL DA +G L++TL+L E+
Sbjct: 1551 INYDDKSWYSIQAQLLSNMNT-MSSTTRAMLLDDANFFYQSGRWEMTKFLDLTLYLVNED 1609
Query: 351 DHLVWE 368
WE
Sbjct: 1610 SLAPWE 1615
>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/85 (27%), Positives = 45/85 (52%)
Frame = +3
Query: 120 TKDKFIIINPEEIAPYLVNYDKDTWYLLSKFLQSEKRTQIPAITRAKLLHDAWNLAYAGE 299
T + ++I+N + + V YD +T+ L K LQ T I I R+ +L D+++L+
Sbjct: 721 TSNDWLILNTGGVGYFKVLYDPETYRKLVKQLQ-RNHTTISPIDRSMILVDSFDLSKTSL 779
Query: 300 LSFATALNMTLFLKTEEDHLVWEAV 374
L+ + ++ +++ E D + W V
Sbjct: 780 LNISVYFDLLEYVEKETDKMTWSIV 804
>AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical
protein Y67D8C.9 protein.
Length = 1073
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +3
Query: 78 WMKNVKELTINDMP-TKDKFIIINPEEIAPYLVNYDKDTWYLLSKFLQSEKRTQIPAITR 254
W+KN + ++ D + ++ +++NPE PY VNYD W LL++ L + +I +R
Sbjct: 711 WLKN-RTVSFGDAEISPNQAVLVNPEWKYPYRVNYDLLNWKLLARTLH-QNHLEINEKSR 768
Query: 255 AKLLHDA 275
+L+ DA
Sbjct: 769 MQLILDA 775
>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
protein Y42A5A.1 protein.
Length = 1045
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/85 (21%), Positives = 45/85 (52%)
Frame = +3
Query: 135 IIINPEEIAPYLVNYDKDTWYLLSKFLQSEKRTQIPAITRAKLLHDAWNLAYAGELSFAT 314
++++P ++ + YD + + ++ L + T IP +R++L+ D +A G+L++
Sbjct: 688 LVVDPHQLTYMRLRYDMEMYSDITMALMDDF-TMIPTNSRSRLIDDTLAMAENGQLTYKV 746
Query: 315 ALNMTLFLKTEEDHLVWEAVFPMLD 389
N+T+++ E + ++ LD
Sbjct: 747 PFNLTMYMSREIAYRPFQTFSAYLD 771
>AF036706-7|AAK39282.1| 562|Caenorhabditis elegans Hypothetical
protein T07A9.10 protein.
Length = 562
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 57 SKTTPLVWMKNVKELTINDMPTKDKFIIINPE 152
SK+ + W+K +KEL +N P + + +N +
Sbjct: 124 SKSPAVKWIKTLKELNLNLKPVESQIFTVNSQ 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,467,350
Number of Sequences: 27780
Number of extensions: 332612
Number of successful extensions: 814
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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