Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1956
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK131078-1|BAC85128.1| 1386|Homo sapiens FLJ00274 protein protein. 33 1.6
CR457340-1|CAG33621.1| 350|Homo sapiens DKFZP566H073 protein. 31 4.8
BC010139-1|AAH10139.1| 350|Homo sapiens ring finger protein 167... 31 4.8
AL834284-1|CAD38958.1| 349|Homo sapiens hypothetical protein pr... 31 4.8
AL079315-1|CAB45281.1| 158|Homo sapiens hypothetical protein pr... 31 4.8
AL050060-1|CAB43253.1| 324|Homo sapiens hypothetical protein pr... 31 4.8
AK025329-1|BAB15113.1| 350|Homo sapiens protein ( Homo sapiens ... 31 4.8
BC064401-1|AAH64401.1| 547|Homo sapiens TJAP1 protein protein. 30 8.5
BC046239-1|AAH46239.1| 557|Homo sapiens TJAP1 protein protein. 30 8.5
AL355802-3|CAI42618.1| 557|Homo sapiens RP3-337H4.1 protein. 30 8.5
AL355802-2|CAI42619.1| 547|Homo sapiens RP3-337H4.1 protein. 30 8.5
AL355802-1|CAI42617.1| 155|Homo sapiens RP3-337H4.1 protein. 30 8.5
AK024269-1|BAB14867.1| 547|Homo sapiens protein ( Homo sapiens ... 30 8.5
>AK131078-1|BAC85128.1| 1386|Homo sapiens FLJ00274 protein protein.
Length = 1386
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 71 HSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLTNEAHDAPVGDEIASTAEPDATE 238
H DQ+ + P +G +D+EG DPA D P +++ AE + E
Sbjct: 122 HIHGEDQEPPDTPGEGEEDDEEGCASTDPAGADEGSGPDRPT-EDMGQDAEDTSEE 176
>CR457340-1|CAG33621.1| 350|Homo sapiens DKFZP566H073 protein.
Length = 350
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2
Query: 71 HSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLT 172
H D+DQ+EE TQG E DEG D PA+ T
Sbjct: 276 HRGPGDEDQEEE-TQGQEEGDEGEPRDHPASERT 308
>BC010139-1|AAH10139.1| 350|Homo sapiens ring finger protein 167
protein.
Length = 350
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2
Query: 71 HSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLT 172
H D+DQ+EE TQG E DEG D PA+ T
Sbjct: 276 HRGPGDEDQEEE-TQGQEEGDEGEPRDHPASERT 308
>AL834284-1|CAD38958.1| 349|Homo sapiens hypothetical protein
protein.
Length = 349
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2
Query: 71 HSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLT 172
H D+DQ+EE TQG E DEG D PA+ T
Sbjct: 275 HRGPGDEDQEEE-TQGQEEGDEGEPRDHPASERT 307
>AL079315-1|CAB45281.1| 158|Homo sapiens hypothetical protein
protein.
Length = 158
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2
Query: 71 HSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLT 172
H D+DQ+EE TQG E DEG D PA+ T
Sbjct: 84 HRGPGDEDQEEE-TQGQEEGDEGEPRDHPASERT 116
>AL050060-1|CAB43253.1| 324|Homo sapiens hypothetical protein
protein.
Length = 324
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2
Query: 71 HSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLT 172
H D+DQ+EE TQG E DEG D PA+ T
Sbjct: 250 HRGPGDEDQEEE-TQGQEEGDEGEPRDHPASERT 282
>AK025329-1|BAB15113.1| 350|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21676 fis, clone COL09164. ).
Length = 350
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2
Query: 71 HSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLT 172
H D+DQ+EE TQG E DEG D PA+ T
Sbjct: 276 HRGPGDEDQEEE-TQGQEEGDEGEPRDHPASERT 308
>BC064401-1|AAH64401.1| 547|Homo sapiens TJAP1 protein protein.
Length = 547
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 12 APCSNPHRKSTPTIRELRTLIPAITTRTRRKNPLRVRTKM 131
AP P+RK+ P RELR IP +R ++ PL +M
Sbjct: 5 APAKKPYRKAPPEHRELRLEIPG--SRLEQEEPLTDAERM 42
>BC046239-1|AAH46239.1| 557|Homo sapiens TJAP1 protein protein.
Length = 557
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 12 APCSNPHRKSTPTIRELRTLIPAITTRTRRKNPLRVRTKM 131
AP P+RK+ P RELR IP +R ++ PL +M
Sbjct: 5 APAKKPYRKAPPEHRELRLEIPG--SRLEQEEPLTDAERM 42
>AL355802-3|CAI42618.1| 557|Homo sapiens RP3-337H4.1 protein.
Length = 557
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 12 APCSNPHRKSTPTIRELRTLIPAITTRTRRKNPLRVRTKM 131
AP P+RK+ P RELR IP +R ++ PL +M
Sbjct: 5 APAKKPYRKAPPEHRELRLEIPG--SRLEQEEPLTDAERM 42
>AL355802-2|CAI42619.1| 547|Homo sapiens RP3-337H4.1 protein.
Length = 547
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 12 APCSNPHRKSTPTIRELRTLIPAITTRTRRKNPLRVRTKM 131
AP P+RK+ P RELR IP +R ++ PL +M
Sbjct: 5 APAKKPYRKAPPEHRELRLEIPG--SRLEQEEPLTDAERM 42
>AL355802-1|CAI42617.1| 155|Homo sapiens RP3-337H4.1 protein.
Length = 155
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 12 APCSNPHRKSTPTIRELRTLIPAITTRTRRKNPLRVRTKM 131
AP P+RK+ P RELR IP +R ++ PL +M
Sbjct: 5 APAKKPYRKAPPEHRELRLEIPG--SRLEQEEPLTDAERM 42
>AK024269-1|BAB14867.1| 547|Homo sapiens protein ( Homo sapiens
cDNA FLJ14207 fis, clone NT2RP3003185, weakly similar to
TROPOMYOSIN 1, FUSION PROTEIN 33. ).
Length = 547
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 12 APCSNPHRKSTPTIRELRTLIPAITTRTRRKNPLRVRTKM 131
AP P+RK+ P RELR IP +R ++ PL +M
Sbjct: 5 APAKKPYRKAPPEHRELRLEIPG--SRLEQEEPLTDAERM 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,289,331
Number of Sequences: 237096
Number of extensions: 1624206
Number of successful extensions: 4200
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4194
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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