Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1954
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007491-1|AAH07491.1| 846|Homo sapiens exonuclease 1 protein. 226 8e-59
AL365366-8|CAI15658.1| 846|Homo sapiens exonuclease 1 protein. 226 8e-59
AF549168-1|AAN39382.1| 846|Homo sapiens exonuclease 1 protein. 226 8e-59
AF091754-2|AAC69880.1| 803|Homo sapiens exonuclease Ia protein. 226 8e-59
AF091754-1|AAC69879.1| 846|Homo sapiens exonuclease Ib protein. 226 8e-59
AF091740-1|AAC63043.1| 803|Homo sapiens exonuclease 1a protein. 226 8e-59
AF084974-1|AAD13754.1| 846|Homo sapiens exonuclease I protein. 226 8e-59
AF060479-1|AAC33874.1| 800|Homo sapiens exonuclease I protein. 226 8e-59
AF042282-1|AAC32259.1| 803|Homo sapiens Hex1 protein. 226 8e-59
AC004783-1|AAC32424.1| 803|Homo sapiens Hex1 protein. 226 8e-59
AL365366-6|CAI15657.1| 169|Homo sapiens exonuclease 1 protein. 111 3e-40
AL365366-7|CAI15656.1| 166|Homo sapiens exonuclease 1 protein. 104 5e-38
AL365366-5|CAI15655.1| 135|Homo sapiens exonuclease 1 protein. 151 4e-36
X76771-1|CAA54166.1| 380|Homo sapiens flap endonuclease-1 protein. 64 4e-10
L37374-1|AAA91331.1| 380|Homo sapiens endonuclease protein. 64 4e-10
CR536562-1|CAG38799.1| 380|Homo sapiens FEN1 protein. 64 4e-10
BT019524-1|AAV38331.1| 380|Homo sapiens flap structure-specific... 64 4e-10
BC000323-1|AAH00323.1| 380|Homo sapiens flap structure-specific... 64 4e-10
AF523117-1|AAM74238.1| 380|Homo sapiens flap structure-specific... 64 4e-10
AC004770-3|AAC23394.1| 380|Homo sapiens FEN1_HUMAN protein. 64 4e-10
BC117206-1|AAI17207.1| 908|Homo sapiens hypothetical protein FL... 46 2e-04
BC117204-1|AAI17205.1| 908|Homo sapiens hypothetical protein FL... 46 2e-04
AK131387-1|BAD18538.1| 908|Homo sapiens protein ( Homo sapiens ... 46 2e-04
X69978-1|CAA49598.1| 1186|Homo sapiens XP-G factor protein. 45 4e-04
L20046-1|AAC37533.1| 1186|Homo sapiens excision repair protein p... 45 4e-04
BC031522-1|AAH31522.1| 1186|Homo sapiens excision repair cross-c... 45 4e-04
AL157769-8|CAI14530.1| 1186|Homo sapiens excision repair cross-c... 45 4e-04
AF550128-1|AAN46091.1| 1186|Homo sapiens excision repair cross-c... 45 4e-04
AF462447-1|AAP97715.1| 1186|Homo sapiens excision repair protein... 45 4e-04
AF255442-1|AAF89179.1| 1186|Homo sapiens xeroderma pigmentosum c... 45 4e-04
AF255436-1|AAF89178.1| 232|Homo sapiens xeroderma pigmentosum c... 45 4e-04
AL157769-7|CAI14529.1| 142|Homo sapiens excision repair cross-c... 44 5e-04
D16305-1|BAA03812.1| 1185|Homo sapiens ERCC5 protein. 44 8e-04
AB209312-1|BAD92549.1| 1611|Homo sapiens DNA-repair protein comp... 39 0.018
X71341-1|CAA50481.1| 88|Homo sapiens xeroderma pigmentosum gro... 38 0.032
AL157769-9|CAI14531.1| 419|Homo sapiens excision repair cross-c... 37 0.097
>BC007491-1|AAH07491.1| 846|Homo sapiens exonuclease 1 protein.
Length = 846
Score = 226 bits (552), Expect = 8e-59
Identities = 110/217 (50%), Positives = 143/217 (65%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
K++ MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
RS++ITHAMA +I R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 573 XVLFKMDLHGTXTLVEHPKLPHVMKCPIQHYTFDKFR 683
V+ KMD G ++ +L + +T +KFR
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFR 216
>AL365366-8|CAI15658.1| 846|Homo sapiens exonuclease 1 protein.
Length = 846
Score = 226 bits (552), Expect = 8e-59
Identities = 110/217 (50%), Positives = 143/217 (65%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
K++ MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
RS++ITHAMA +I R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 573 XVLFKMDLHGTXTLVEHPKLPHVMKCPIQHYTFDKFR 683
V+ KMD G ++ +L + +T +KFR
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFR 216
>AF549168-1|AAN39382.1| 846|Homo sapiens exonuclease 1 protein.
Length = 846
Score = 226 bits (552), Expect = 8e-59
Identities = 110/217 (50%), Positives = 143/217 (65%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
K++ MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
RS++ITHAMA +I R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 573 XVLFKMDLHGTXTLVEHPKLPHVMKCPIQHYTFDKFR 683
V+ KMD G ++ +L + +T +KFR
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFR 216
>AF091754-2|AAC69880.1| 803|Homo sapiens exonuclease Ia protein.
Length = 803
Score = 226 bits (552), Expect = 8e-59
Identities = 110/217 (50%), Positives = 143/217 (65%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
K++ MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
RS++ITHAMA +I R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 573 XVLFKMDLHGTXTLVEHPKLPHVMKCPIQHYTFDKFR 683
V+ KMD G ++ +L + +T +KFR
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFR 216
>AF091754-1|AAC69879.1| 846|Homo sapiens exonuclease Ib protein.
Length = 846
Score = 226 bits (552), Expect = 8e-59
Identities = 110/217 (50%), Positives = 143/217 (65%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
K++ MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
RS++ITHAMA +I R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 573 XVLFKMDLHGTXTLVEHPKLPHVMKCPIQHYTFDKFR 683
V+ KMD G ++ +L + +T +KFR
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFR 216
>AF091740-1|AAC63043.1| 803|Homo sapiens exonuclease 1a protein.
Length = 803
Score = 226 bits (552), Expect = 8e-59
Identities = 110/217 (50%), Positives = 143/217 (65%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
K++ MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
RS++ITHAMA +I R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 573 XVLFKMDLHGTXTLVEHPKLPHVMKCPIQHYTFDKFR 683
V+ KMD G ++ +L + +T +KFR
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFR 216
>AF084974-1|AAD13754.1| 846|Homo sapiens exonuclease I protein.
Length = 846
Score = 226 bits (552), Expect = 8e-59
Identities = 110/217 (50%), Positives = 143/217 (65%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
K++ MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
RS++ITHAMA +I R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 573 XVLFKMDLHGTXTLVEHPKLPHVMKCPIQHYTFDKFR 683
V+ KMD G ++ +L + +T +KFR
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFR 216
>AF060479-1|AAC33874.1| 800|Homo sapiens exonuclease I protein.
Length = 800
Score = 226 bits (552), Expect = 8e-59
Identities = 110/217 (50%), Positives = 143/217 (65%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
K++ MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
RS++ITHAMA +I R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 573 XVLFKMDLHGTXTLVEHPKLPHVMKCPIQHYTFDKFR 683
V+ KMD G ++ +L + +T +KFR
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFR 216
>AF042282-1|AAC32259.1| 803|Homo sapiens Hex1 protein.
Length = 803
Score = 226 bits (552), Expect = 8e-59
Identities = 110/217 (50%), Positives = 143/217 (65%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
K++ MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
RS++ITHAMA +I R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 573 XVLFKMDLHGTXTLVEHPKLPHVMKCPIQHYTFDKFR 683
V+ KMD G ++ +L + +T +KFR
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFR 216
>AC004783-1|AAC32424.1| 803|Homo sapiens Hex1 protein.
Length = 803
Score = 226 bits (552), Expect = 8e-59
Identities = 110/217 (50%), Positives = 143/217 (65%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
K++ MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
RS++ITHAMA +I R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 573 XVLFKMDLHGTXTLVEHPKLPHVMKCPIQHYTFDKFR 683
V+ KMD G ++ +L + +T +KFR
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFR 216
>AL365366-6|CAI15657.1| 169|Homo sapiens exonuclease 1 protein.
Length = 169
Score = 111 bits (268), Expect(2) = 3e-40
Identities = 56/109 (51%), Positives = 70/109 (64%)
Frame = +3
Query: 306 RRESRNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEA 485
RR N+ K + +LL GK+ EAR RS++ITHAMA +I R VDC+VAPYEA
Sbjct: 54 RRRQANLLKGK--QLLREGKVSEARECFTRSINITHAMAHKVIKAARSQGVDCLVAPYEA 111
Query: 486 DAQLAYLNIKNIAQLVITEDSDLILFGCTXVLFKMDLHGTXTLVEHPKL 632
DAQLAYLN I Q +ITEDSDL+ FGC V+ KMD G ++ +L
Sbjct: 112 DAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEIDQARL 160
Score = 74.1 bits (174), Expect(2) = 3e-40
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETD 191
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTD 53
>AL365366-7|CAI15656.1| 166|Homo sapiens exonuclease 1 protein.
Length = 166
Score = 104 bits (249), Expect(2) = 5e-38
Identities = 55/109 (50%), Positives = 68/109 (62%)
Frame = +3
Query: 306 RRESRNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEA 485
RR N+ K + +LL GK+ EAR RS++ITHAMA R VDC+VAPYEA
Sbjct: 54 RRRQANLLKGK--QLLREGKVSEARECFTRSINITHAMAHKA---ARSQGVDCLVAPYEA 108
Query: 486 DAQLAYLNIKNIAQLVITEDSDLILFGCTXVLFKMDLHGTXTLVEHPKL 632
DAQLAYLN I Q +ITEDSDL+ FGC V+ KMD G ++ +L
Sbjct: 109 DAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEIDQARL 157
Score = 74.1 bits (174), Expect(2) = 5e-38
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETD 191
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTD 53
>AL365366-5|CAI15655.1| 135|Homo sapiens exonuclease 1 protein.
Length = 135
Score = 151 bits (365), Expect = 4e-36
Identities = 70/134 (52%), Positives = 93/134 (69%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
K++ MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 393 RSVDITHAMALDLI 434
RS++ITHAMA +I
Sbjct: 121 RSINITHAMAHKVI 134
>X76771-1|CAA54166.1| 380|Homo sapiens flap endonuclease-1 protein.
Length = 380
Score = 64.5 bits (150), Expect = 4e-10
Identities = 53/186 (28%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Frame = +3
Query: 33 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFAC---ADKLVRGE-ET 188
MGI GL I A R D+ + G VAID+ +++ A D L E ET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 189 DMHIKYCLKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKI 368
H+ ++ IKP+ VFDG+ K+ +KR E R ++K+ + + G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 369 EEARSYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDS 548
+E + +R V +T + M + + AP EA+A A L TED
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 549 DLILFG 566
D + FG
Sbjct: 181 DCLTFG 186
>L37374-1|AAA91331.1| 380|Homo sapiens endonuclease protein.
Length = 380
Score = 64.5 bits (150), Expect = 4e-10
Identities = 53/186 (28%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Frame = +3
Query: 33 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFAC---ADKLVRGE-ET 188
MGI GL I A R D+ + G VAID+ +++ A D L E ET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 189 DMHIKYCLKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKI 368
H+ ++ IKP+ VFDG+ K+ +KR E R ++K+ + + G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 369 EEARSYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDS 548
+E + +R V +T + M + + AP EA+A A L TED
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 549 DLILFG 566
D + FG
Sbjct: 181 DCLTFG 186
>CR536562-1|CAG38799.1| 380|Homo sapiens FEN1 protein.
Length = 380
Score = 64.5 bits (150), Expect = 4e-10
Identities = 53/186 (28%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Frame = +3
Query: 33 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFAC---ADKLVRGE-ET 188
MGI GL I A R D+ + G VAID+ +++ A D L E ET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 189 DMHIKYCLKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKI 368
H+ ++ IKP+ VFDG+ K+ +KR E R ++K+ + + G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 369 EEARSYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDS 548
+E + +R V +T + M + + AP EA+A A L TED
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 549 DLILFG 566
D + FG
Sbjct: 181 DCLTFG 186
>BT019524-1|AAV38331.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 64.5 bits (150), Expect = 4e-10
Identities = 53/186 (28%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Frame = +3
Query: 33 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFAC---ADKLVRGE-ET 188
MGI GL I A R D+ + G VAID+ +++ A D L E ET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 189 DMHIKYCLKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKI 368
H+ ++ IKP+ VFDG+ K+ +KR E R ++K+ + + G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 369 EEARSYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDS 548
+E + +R V +T + M + + AP EA+A A L TED
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 549 DLILFG 566
D + FG
Sbjct: 181 DCLTFG 186
>BC000323-1|AAH00323.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 64.5 bits (150), Expect = 4e-10
Identities = 53/186 (28%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Frame = +3
Query: 33 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFAC---ADKLVRGE-ET 188
MGI GL I A R D+ + G VAID+ +++ A D L E ET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 189 DMHIKYCLKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKI 368
H+ ++ IKP+ VFDG+ K+ +KR E R ++K+ + + G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 369 EEARSYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDS 548
+E + +R V +T + M + + AP EA+A A L TED
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 549 DLILFG 566
D + FG
Sbjct: 181 DCLTFG 186
>AF523117-1|AAM74238.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 64.5 bits (150), Expect = 4e-10
Identities = 53/186 (28%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Frame = +3
Query: 33 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFAC---ADKLVRGE-ET 188
MGI GL I A R D+ + G VAID+ +++ A D L E ET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 189 DMHIKYCLKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKI 368
H+ ++ IKP+ VFDG+ K+ +KR E R ++K+ + + G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 369 EEARSYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDS 548
+E + +R V +T + M + + AP EA+A A L TED
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 549 DLILFG 566
D + FG
Sbjct: 181 DCLTFG 186
>AC004770-3|AAC23394.1| 380|Homo sapiens FEN1_HUMAN protein.
Length = 380
Score = 64.5 bits (150), Expect = 4e-10
Identities = 53/186 (28%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Frame = +3
Query: 33 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFAC---ADKLVRGE-ET 188
MGI GL I A R D+ + G VAID+ +++ A D L E ET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 189 DMHIKYCLKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKI 368
H+ ++ IKP+ VFDG+ K+ +KR E R ++K+ + + G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 369 EEARSYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDS 548
+E + +R V +T + M + + AP EA+A A L TED
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 549 DLILFG 566
D + FG
Sbjct: 181 DCLTFG 186
>BC117206-1|AAI17207.1| 908|Homo sapiens hypothetical protein
FLJ40869 protein.
Length = 908
Score = 46.0 bits (104), Expect = 2e-04
Identities = 45/182 (24%), Positives = 77/182 (42%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ L +E + + G T+A+D W+ + A K + G H++
Sbjct: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCE---AQTVKKMMGSVMKPHLRNLF 57
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
++ L ++K + V +G KA SKR ++R S ++ + G+ +S LR
Sbjct: 58 FRISYLTQMDVKLVFVMEGEPPKLKADVISKRNQTRYGSSGKSWSQKT-GR-SHFKSVLR 115
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
+ H + EC + + + A EA+A AYLN +T D D L+G
Sbjct: 116 ECL---HML------EC--LGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQ 164
Query: 573 XV 578
V
Sbjct: 165 TV 166
>BC117204-1|AAI17205.1| 908|Homo sapiens hypothetical protein
FLJ40869 protein.
Length = 908
Score = 46.0 bits (104), Expect = 2e-04
Identities = 45/182 (24%), Positives = 77/182 (42%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ L +E + + G T+A+D W+ + A K + G H++
Sbjct: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCE---AQTVKKMMGSVMKPHLRNLF 57
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
++ L ++K + V +G KA SKR ++R S ++ + G+ +S LR
Sbjct: 58 FRISYLTQMDVKLVFVMEGEPPKLKADVISKRNQTRYGSSGKSWSQKT-GR-SHFKSVLR 115
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
+ H + EC + + + A EA+A AYLN +T D D L+G
Sbjct: 116 ECL---HML------EC--LGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQ 164
Query: 573 XV 578
V
Sbjct: 165 TV 166
>AK131387-1|BAD18538.1| 908|Homo sapiens protein ( Homo sapiens
cDNA FLJ16464 fis, clone BRHIP2012360. ).
Length = 908
Score = 46.0 bits (104), Expect = 2e-04
Identities = 45/182 (24%), Positives = 77/182 (42%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ L +E + + G T+A+D W+ + A K + G H++
Sbjct: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCE---AQTVKKMMGSVMKPHLRNLF 57
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
++ L ++K + V +G KA SKR ++R S ++ + G+ +S LR
Sbjct: 58 FRISYLTQMDVKLVFVMEGEPPKLKADVISKRNQTRYGSSGKSWSQKT-GR-SHFKSVLR 115
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
+ H + EC + + + A EA+A AYLN +T D D L+G
Sbjct: 116 ECL---HML------EC--LGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQ 164
Query: 573 XV 578
V
Sbjct: 165 TV 166
>X69978-1|CAA49598.1| 1186|Homo sapiens XP-G factor protein.
Length = 1186
Score = 44.8 bits (101), Expect = 4e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 389
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAP 476
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGC 569
R + +T M L+ R + I AP EA+AQ A L++ + IT+DSD+ LFG
Sbjct: 759 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGA 818
Query: 570 TXV 578
V
Sbjct: 819 RHV 821
>L20046-1|AAC37533.1| 1186|Homo sapiens excision repair protein
protein.
Length = 1186
Score = 44.8 bits (101), Expect = 4e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 389
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAP 476
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGC 569
R + +T M L+ R + I AP EA+AQ A L++ + IT+DSD+ LFG
Sbjct: 759 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGA 818
Query: 570 TXV 578
V
Sbjct: 819 RHV 821
>BC031522-1|AAH31522.1| 1186|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1186
Score = 44.8 bits (101), Expect = 4e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 389
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAP 476
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGC 569
R + +T M L+ R + I AP EA+AQ A L++ + IT+DSD+ LFG
Sbjct: 759 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGA 818
Query: 570 TXV 578
V
Sbjct: 819 RHV 821
>AL157769-8|CAI14530.1| 1186|Homo sapiens excision repair
cross-complementing rodent repairt protein.
Length = 1186
Score = 44.8 bits (101), Expect = 4e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 389
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAP 476
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGC 569
R + +T M L+ R + I AP EA+AQ A L++ + IT+DSD+ LFG
Sbjct: 759 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGA 818
Query: 570 TXV 578
V
Sbjct: 819 RHV 821
>AF550128-1|AAN46091.1| 1186|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1186
Score = 44.8 bits (101), Expect = 4e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 389
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAP 476
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGC 569
R + +T M L+ R + I AP EA+AQ A L++ + IT+DSD+ LFG
Sbjct: 759 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGA 818
Query: 570 TXV 578
V
Sbjct: 819 RHV 821
>AF462447-1|AAP97715.1| 1186|Homo sapiens excision repair protein
ERCC5 protein.
Length = 1186
Score = 44.8 bits (101), Expect = 4e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 389
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAP 476
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGC 569
R + +T M L+ R + I AP EA+AQ A L++ + IT+DSD+ LFG
Sbjct: 759 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGA 818
Query: 570 TXV 578
V
Sbjct: 819 RHV 821
>AF255442-1|AAF89179.1| 1186|Homo sapiens xeroderma pigmentosum
complementation group G protein splice variant protein.
Length = 1186
Score = 44.8 bits (101), Expect = 4e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 389
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAP 476
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGC 569
R + +T M L+ R + I AP EA+AQ A L++ + IT+DSD+ LFG
Sbjct: 759 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGA 818
Query: 570 TXV 578
V
Sbjct: 819 RHV 821
>AF255436-1|AAF89178.1| 232|Homo sapiens xeroderma pigmentosum
complementation group G protein splice variant protein.
Length = 232
Score = 44.8 bits (101), Expect = 4e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 389
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAP 476
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
>AL157769-7|CAI14529.1| 142|Homo sapiens excision repair
cross-complementing rodent repairt protein.
Length = 142
Score = 44.4 bits (100), Expect = 5e-04
Identities = 28/99 (28%), Positives = 45/99 (45%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNIS 329
+ LL I+PI VFDG K T KRR+ ++++
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLA 98
>D16305-1|BAA03812.1| 1185|Homo sapiens ERCC5 protein.
Length = 1185
Score = 43.6 bits (98), Expect = 8e-04
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ GL +E + R+ G +A+D WL++ D+ E + H
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIE-NPHPLTLF 59
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 389
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAP 476
+ S AL + + R+ N D V P
Sbjct: 120 QTSFRSQRDEALPSLTQVRREN-DLYVLP 147
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGC 569
R + +T M L+ R + I AP EA+AQ A L++ + IT+DSD+ LFG
Sbjct: 759 RFAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAVLDLTDQTSGTITDDSDIWLFGA 818
Query: 570 TXV 578
V
Sbjct: 819 RHV 821
>AB209312-1|BAD92549.1| 1611|Homo sapiens DNA-repair protein
complementing XP-G cells variant protein.
Length = 1611
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 390 RRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGC 569
R + +T M L+ R + I AP EA+AQ A L++ + IT+DSD+ LFG
Sbjct: 1184 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGA 1243
Query: 570 TXV 578
V
Sbjct: 1244 RHV 1246
>X71341-1|CAA50481.1| 88|Homo sapiens xeroderma pigmentosum group
G complementing factor protein.
Length = 88
Score = 38.3 bits (85), Expect = 0.032
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ GL +E + R+ G +A+D WL++ D+ E + H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIE-NPHLLTLF 59
Query: 213 KYMTMLLSKNIKPILVFDG 269
+ LL I+PI VFDG
Sbjct: 60 HRLCKLLFFRIRPIFVFDG 78
>AL157769-9|CAI14531.1| 419|Homo sapiens excision repair
cross-complementing rodent repairt protein.
Length = 419
Score = 36.7 bits (81), Expect = 0.097
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +3
Query: 444 RKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCTXV 578
R + I AP EA+AQ A L++ + IT+DSD+ LFG V
Sbjct: 10 RLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGARHV 54
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,791,532
Number of Sequences: 237096
Number of extensions: 2037557
Number of successful extensions: 4101
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 3966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4078
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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