Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1954
(800 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89022-1|CAA61431.1| 732|Drosophila melanogaster Tosca protein. 307 1e-83
AY051794-1|AAK93218.1| 732|Drosophila melanogaster LD31018p pro... 307 1e-83
AE014134-2957|AAF53687.1| 732|Drosophila melanogaster CG10387-P... 307 1e-83
X89021-1|CAA61430.1| 732|Drosophila melanogaster Tosca protein. 305 3e-83
AL031863-6|CAA21320.1| 385|Drosophila melanogaster EG:EG0003.3 ... 68 2e-11
AE013599-2356|AAF57944.1| 385|Drosophila melanogaster CG8648-PA... 68 2e-11
BT015206-1|AAT94435.1| 932|Drosophila melanogaster RE62451p pro... 50 4e-06
AY128475-1|AAM75068.1| 726|Drosophila melanogaster RE33588p pro... 50 4e-06
AF162793-1|AAD50780.1| 1257|Drosophila melanogaster XPG variant ... 50 4e-06
AF162792-1|AAD50779.1| 1236|Drosophila melanogaster XPG protein. 50 4e-06
AF160893-1|AAD46833.1| 726|Drosophila melanogaster GM10765p pro... 50 4e-06
AF144092-1|AAD38375.1| 1236|Drosophila melanogaster nucleotide e... 50 4e-06
AE014296-935|AAF50805.1| 726|Drosophila melanogaster CG10670-PA... 50 4e-06
AE014134-1515|AAO41169.1| 1236|Drosophila melanogaster CG10890-P... 50 4e-06
AE014134-1514|AAF52678.1| 1236|Drosophila melanogaster CG10890-P... 50 4e-06
AE014134-1513|AAG22424.1| 1257|Drosophila melanogaster CG10890-P... 50 4e-06
AB103508-1|BAC57447.1| 726|Drosophila melanogaster xpg like end... 50 4e-06
AF125578-1|AAD47568.1| 1236|Drosophila melanogaster DNA repair e... 49 9e-06
AF162795-1|AAD51936.1| 725|Drosophila melanogaster mutant nucle... 48 2e-05
AJ389385-1|CAB52135.1| 378|Drosophila melanogaster Nucleotide e... 45 1e-04
AY052070-1|AAK93494.1| 854|Drosophila melanogaster SD02572p pro... 30 3.2
AF047010-1|AAC05483.1| 815|Drosophila melanogaster asteroid pro... 30 3.2
AE014134-193|AAF51424.1| 854|Drosophila melanogaster CG4426-PA ... 30 3.2
AE014297-642|AAF54144.3| 191|Drosophila melanogaster CG11286-PA... 30 4.2
BT001689-1|AAN71444.1| 364|Drosophila melanogaster RE58324p pro... 29 9.8
AE014134-776|AAF50978.3| 364|Drosophila melanogaster CG15628-PA... 29 9.8
>X89022-1|CAA61431.1| 732|Drosophila melanogaster Tosca protein.
Length = 732
Score = 307 bits (754), Expect = 1e-83
Identities = 142/217 (65%), Positives = 175/217 (80%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGITGLIPF+ KAS + + + G TVA+D+YCWLHKG F CA+KL RGE+TD++I+YCL
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
KY+ MLLS +IKPILVFDG+HLPAKA+TE +RR+SR SK+RAAELL LG+IEEARS++R
Sbjct: 61 KYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHMR 120
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
R VD+TH MAL LI ECR NVDCIVAPYEADAQ+A+LN ++AQ +ITEDSDL LFG
Sbjct: 121 RCVDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGAK 180
Query: 573 XVLFKMDLHGTXTLVEHPKLPHVMKCPIQHYTFDKFR 683
++FK+DL+G+ LVE KL M C + Y FDKFR
Sbjct: 181 NIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFR 217
>AY051794-1|AAK93218.1| 732|Drosophila melanogaster LD31018p
protein.
Length = 732
Score = 307 bits (754), Expect = 1e-83
Identities = 142/217 (65%), Positives = 175/217 (80%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGITGLIPF+ KAS + + + G TVA+D+YCWLHKG F CA+KL RGE+TD++I+YCL
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
KY+ MLLS +IKPILVFDG+HLPAKA+TE +RR+SR SK+RAAELL LG+IEEARS++R
Sbjct: 61 KYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHMR 120
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
R VD+TH MAL LI ECR NVDCIVAPYEADAQ+A+LN ++AQ +ITEDSDL LFG
Sbjct: 121 RCVDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGAK 180
Query: 573 XVLFKMDLHGTXTLVEHPKLPHVMKCPIQHYTFDKFR 683
++FK+DL+G+ LVE KL M C + Y FDKFR
Sbjct: 181 NIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFR 217
>AE014134-2957|AAF53687.1| 732|Drosophila melanogaster CG10387-PA
protein.
Length = 732
Score = 307 bits (754), Expect = 1e-83
Identities = 142/217 (65%), Positives = 175/217 (80%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGITGLIPF+ KAS + + + G TVA+D+YCWLHKG F CA+KL RGE+TD++I+YCL
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
KY+ MLLS +IKPILVFDG+HLPAKA+TE +RR+SR SK+RAAELL LG+IEEARS++R
Sbjct: 61 KYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHMR 120
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
R VD+TH MAL LI ECR NVDCIVAPYEADAQ+A+LN ++AQ +ITEDSDL LFG
Sbjct: 121 RCVDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGAK 180
Query: 573 XVLFKMDLHGTXTLVEHPKLPHVMKCPIQHYTFDKFR 683
++FK+DL+G+ LVE KL M C + Y FDKFR
Sbjct: 181 NIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFR 217
>X89021-1|CAA61430.1| 732|Drosophila melanogaster Tosca protein.
Length = 732
Score = 305 bits (750), Expect = 3e-83
Identities = 141/217 (64%), Positives = 174/217 (80%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MGITGLIPF+ KAS + + + G TVA+D+YCWLHKG F CA+KL RGE+TD++I+YCL
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 392
KY+ MLLS +IKPILVFDG+HLPAKA+TE +RR+SR SK+RAAELL LG+IEEARS++R
Sbjct: 61 KYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHMR 120
Query: 393 RSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFGCT 572
R VD+TH M L LI ECR NVDCIVAPYEADAQ+A+LN ++AQ +ITEDSDL LFG
Sbjct: 121 RCVDVTHDMTLRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGAK 180
Query: 573 XVLFKMDLHGTXTLVEHPKLPHVMKCPIQHYTFDKFR 683
++FK+DL+G+ LVE KL M C + Y FDKFR
Sbjct: 181 NIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFR 217
>AL031863-6|CAA21320.1| 385|Drosophila melanogaster EG:EG0003.3
protein.
Length = 385
Score = 67.7 bits (158), Expect = 2e-11
Identities = 59/192 (30%), Positives = 82/192 (42%), Gaps = 9/192 (4%)
Frame = +3
Query: 33 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFACADK-----LVRGEE 185
MGI GL I +A R +++ F G VAID+ L++ A + V G+
Sbjct: 1 MGILGLSKLIADLAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDP 60
Query: 186 TDMHIKYCLKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGK 365
T H+ LL IKP+ VFDG+ K+ +KR E R ++K G
Sbjct: 61 TS-HLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAATDAGD 119
Query: 366 IEEARSYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITED 545
+ RR V +T A + M V + AP EA+AQ A L TED
Sbjct: 120 DAGIEKFNRRLVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATED 179
Query: 546 SDLILFGCTXVL 581
D + FG T +L
Sbjct: 180 MDALTFGSTKLL 191
>AE013599-2356|AAF57944.1| 385|Drosophila melanogaster CG8648-PA
protein.
Length = 385
Score = 67.7 bits (158), Expect = 2e-11
Identities = 59/192 (30%), Positives = 82/192 (42%), Gaps = 9/192 (4%)
Frame = +3
Query: 33 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFACADK-----LVRGEE 185
MGI GL I +A R +++ F G VAID+ L++ A + V G+
Sbjct: 1 MGILGLSKLIADLAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDP 60
Query: 186 TDMHIKYCLKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGK 365
T H+ LL IKP+ VFDG+ K+ +KR E R ++K G
Sbjct: 61 TS-HLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAATDAGD 119
Query: 366 IEEARSYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITED 545
+ RR V +T A + M V + AP EA+AQ A L TED
Sbjct: 120 DAGIEKFNRRLVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATED 179
Query: 546 SDLILFGCTXVL 581
D + FG T +L
Sbjct: 180 MDALTFGSTKLL 191
>BT015206-1|AAT94435.1| 932|Drosophila melanogaster RE62451p protein.
Length = 932
Score = 50.0 bits (114), Expect = 4e-06
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +3
Query: 282 AKAMTESKRRES-RNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIXECRKMNV 458
A+A+ K E + ++ A E L +IE R R + I+ M++D R +
Sbjct: 815 AEALKSQKTSEELQELATNLAQERKEL-EIERNRQD-RMGMSISQRMSIDCQELLRLFGI 872
Query: 459 DCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFG 566
IVAP EA+AQ A+LN ++ IT+DSD+ LFG
Sbjct: 873 PYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFG 908
Score = 47.6 bits (108), Expect = 2e-05
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEE-TDMHIKYC 209
MG+TGL IE + V G +A+D WLH+ D +G ++ H+
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVDISIWLHQVVKGFQDN--KGSALSNAHLLGL 58
Query: 210 LKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSL 359
+ LL ++P+ +FDG K T ++R++ RN A + +L
Sbjct: 59 FHRLCKLLYYRVRPVFIFDGCVPQLKRDTIARRQQQRNKLSNEADRIQAL 108
>AY128475-1|AAM75068.1| 726|Drosophila melanogaster RE33588p
protein.
Length = 726
Score = 50.0 bits (114), Expect = 4e-06
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 4/186 (2%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ L + R ++E G VAID W+ + + D V H+K
Sbjct: 1 MGVKELWGVLTPHCERKPINELRGKKVAIDLAGWVCE-SLNVVDYFVHPRH---HLKNLF 56
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRES--RNISKKRAAELLSL--GKIEEAR 380
L+ + + P+ V +G K+ +KR E R + K + E K ++ R
Sbjct: 57 FRTCYLIWEQVTPVFVLEGVAPKLKSQVIAKRNELQFRGVKPKNSPECTQSQPSKGDKGR 116
Query: 381 SYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 560
S + + L M + C+ P EA+A A+LN + VI++DSD
Sbjct: 117 SRFNHVLKQCETLLLS-------MGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFA 169
Query: 561 FGCTXV 578
+G V
Sbjct: 170 YGAVRV 175
>AF162793-1|AAD50780.1| 1257|Drosophila melanogaster XPG variant
protein.
Length = 1257
Score = 50.0 bits (114), Expect = 4e-06
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +3
Query: 282 AKAMTESKRRES-RNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIXECRKMNV 458
A+A+ K E + ++ A E L +IE R R + I+ M++D R +
Sbjct: 836 AEALKSQKTSEELQELATNLAQERKEL-EIERNRQD-RMGMSISQRMSIDCQELLRLFGI 893
Query: 459 DCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFG 566
IVAP EA+AQ A+LN ++ IT+DSD+ LFG
Sbjct: 894 PYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFG 929
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 120 DSYCWLHKGAFACADKLVRGEE-TDMHIKYCLKYMTMLLSKNIKPILVFDGRHLPAKAMT 296
D WLH+ D +G ++ H+ + LL ++P+ +FDG K T
Sbjct: 51 DISIWLHQVVKGFQDN--KGSALSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRDT 108
Query: 297 ESKRRESRNISKKRAAELLSL 359
++R++ RN A + +L
Sbjct: 109 IARRQQQRNKLSNEADRIQAL 129
>AF162792-1|AAD50779.1| 1236|Drosophila melanogaster XPG protein.
Length = 1236
Score = 50.0 bits (114), Expect = 4e-06
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +3
Query: 282 AKAMTESKRRES-RNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIXECRKMNV 458
A+A+ K E + ++ A E L +IE R R + I+ M++D R +
Sbjct: 815 AEALKSQKTSEELQELATNLAQERKEL-EIERNRQD-RMGMSISQRMSIDCQELLRLFGI 872
Query: 459 DCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFG 566
IVAP EA+AQ A+LN ++ IT+DSD+ LFG
Sbjct: 873 PYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFG 908
Score = 47.6 bits (108), Expect = 2e-05
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEE-TDMHIKYC 209
MG+TGL IE + V G +A+D WLH+ D +G ++ H+
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVDISIWLHQVVKGFQDN--KGSALSNAHLLGL 58
Query: 210 LKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSL 359
+ LL ++P+ +FDG K T ++R++ RN A + +L
Sbjct: 59 FHRLCKLLYYRVRPVFIFDGCVPQLKRDTIARRQQQRNKLSNEADRIQAL 108
>AF160893-1|AAD46833.1| 726|Drosophila melanogaster GM10765p
protein.
Length = 726
Score = 50.0 bits (114), Expect = 4e-06
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 4/186 (2%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ L + R ++E G VAID W+ + + D V H+K
Sbjct: 1 MGVKELWGVLTPHCERKPINELRGKKVAIDLAGWVCE-SLNVVDYFVHPRH---HLKNLF 56
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRES--RNISKKRAAELLSL--GKIEEAR 380
L+ + + P+ V +G K+ +KR E R + K + E K ++ R
Sbjct: 57 FRTCYLIWEQVTPVFVLEGVAPKLKSQVIAKRNELQFRGVKPKNSPECTQSQPSKGDKGR 116
Query: 381 SYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 560
S + + L M + C+ P EA+A A+LN + VI++DSD
Sbjct: 117 SRFNHVLKQCETLLLS-------MGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFA 169
Query: 561 FGCTXV 578
+G V
Sbjct: 170 YGAVRV 175
>AF144092-1|AAD38375.1| 1236|Drosophila melanogaster nucleotide
excision repair proteinMUS201 protein.
Length = 1236
Score = 50.0 bits (114), Expect = 4e-06
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +3
Query: 282 AKAMTESKRRES-RNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIXECRKMNV 458
A+A+ K E + ++ A E L +IE R R + I+ M++D R +
Sbjct: 815 AEALKSQKTSEELQELATNLAQERKEL-EIERNRQD-RMGMSISQRMSIDCQELLRLFGI 872
Query: 459 DCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFG 566
IVAP EA+AQ A+LN ++ IT+DSD+ LFG
Sbjct: 873 PYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFG 908
Score = 47.6 bits (108), Expect = 2e-05
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEE-TDMHIKYC 209
MG+TGL IE + V G +A+D WLH+ D +G ++ H+
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVDISIWLHQVVKGFQDN--KGSALSNAHLLGL 58
Query: 210 LKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSL 359
+ LL ++P+ +FDG K T ++R++ RN A + +L
Sbjct: 59 FHRLCKLLYYRVRPVFIFDGCVPQLKRDTIARRQQQRNKLSNEADRIQAL 108
>AE014296-935|AAF50805.1| 726|Drosophila melanogaster CG10670-PA
protein.
Length = 726
Score = 50.0 bits (114), Expect = 4e-06
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 4/186 (2%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ L + R ++E G VAID W+ + + D V H+K
Sbjct: 1 MGVKELWGVLTPHCERKPINELRGKKVAIDLAGWVCE-SLNVVDYFVHPRH---HLKNLF 56
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRES--RNISKKRAAELLSL--GKIEEAR 380
L+ + + P+ V +G K+ +KR E R + K + E K ++ R
Sbjct: 57 FRTCYLIWEQVTPVFVLEGVAPKLKSQVIAKRNELQFRGVKPKNSPECTQSQPSKGDKGR 116
Query: 381 SYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 560
S + + L M + C+ P EA+A A+LN + VI++DSD
Sbjct: 117 SRFNHVLKQCETLLLS-------MGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFA 169
Query: 561 FGCTXV 578
+G V
Sbjct: 170 YGAVRV 175
>AE014134-1515|AAO41169.1| 1236|Drosophila melanogaster CG10890-PC,
isoform C protein.
Length = 1236
Score = 50.0 bits (114), Expect = 4e-06
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +3
Query: 282 AKAMTESKRRES-RNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIXECRKMNV 458
A+A+ K E + ++ A E L +IE R R + I+ M++D R +
Sbjct: 815 AEALKSQKTSEELQELATNLAQERKEL-EIERNRQD-RMGMSISQRMSIDCQELLRLFGI 872
Query: 459 DCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFG 566
IVAP EA+AQ A+LN ++ IT+DSD+ LFG
Sbjct: 873 PYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFG 908
Score = 47.6 bits (108), Expect = 2e-05
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEE-TDMHIKYC 209
MG+TGL IE + V G +A+D WLH+ D +G ++ H+
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVDISIWLHQVVKGFQDN--KGSALSNAHLLGL 58
Query: 210 LKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSL 359
+ LL ++P+ +FDG K T ++R++ RN A + +L
Sbjct: 59 FHRLCKLLYYRVRPVFIFDGCVPQLKRDTIARRQQQRNKLSNEADRIQAL 108
>AE014134-1514|AAF52678.1| 1236|Drosophila melanogaster CG10890-PB,
isoform B protein.
Length = 1236
Score = 50.0 bits (114), Expect = 4e-06
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +3
Query: 282 AKAMTESKRRES-RNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIXECRKMNV 458
A+A+ K E + ++ A E L +IE R R + I+ M++D R +
Sbjct: 815 AEALKSQKTSEELQELATNLAQERKEL-EIERNRQD-RMGMSISQRMSIDCQELLRLFGI 872
Query: 459 DCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFG 566
IVAP EA+AQ A+LN ++ IT+DSD+ LFG
Sbjct: 873 PYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFG 908
Score = 47.6 bits (108), Expect = 2e-05
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEE-TDMHIKYC 209
MG+TGL IE + V G +A+D WLH+ D +G ++ H+
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVDISIWLHQVVKGFQDN--KGSALSNAHLLGL 58
Query: 210 LKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSL 359
+ LL ++P+ +FDG K T ++R++ RN A + +L
Sbjct: 59 FHRLCKLLYYRVRPVFIFDGCVPQLKRDTIARRQQQRNKLSNEADRIQAL 108
>AE014134-1513|AAG22424.1| 1257|Drosophila melanogaster CG10890-PA,
isoform A protein.
Length = 1257
Score = 50.0 bits (114), Expect = 4e-06
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +3
Query: 282 AKAMTESKRRES-RNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIXECRKMNV 458
A+A+ K E + ++ A E L +IE R R + I+ M++D R +
Sbjct: 836 AEALKSQKTSEELQELATNLAQERKEL-EIERNRQD-RMGMSISQRMSIDCQELLRLFGI 893
Query: 459 DCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFG 566
IVAP EA+AQ A+LN ++ IT+DSD+ LFG
Sbjct: 894 PYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFG 929
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 120 DSYCWLHKGAFACADKLVRGEE-TDMHIKYCLKYMTMLLSKNIKPILVFDGRHLPAKAMT 296
D WLH+ D +G ++ H+ + LL ++P+ +FDG K T
Sbjct: 51 DISIWLHQVVKGFQDN--KGSALSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRDT 108
Query: 297 ESKRRESRNISKKRAAELLSL 359
++R++ RN A + +L
Sbjct: 109 IARRQQQRNKLSNEADRIQAL 129
>AB103508-1|BAC57447.1| 726|Drosophila melanogaster xpg like
endonuclease protein.
Length = 726
Score = 50.0 bits (114), Expect = 4e-06
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 4/186 (2%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 212
MG+ L + R ++E G VAID W+ + + D V H+K
Sbjct: 1 MGVKELWGVLTPHCERKPINELRGKKVAIDLAGWVCE-SLNVVDYFVHPRH---HLKNLF 56
Query: 213 KYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRES--RNISKKRAAELLSL--GKIEEAR 380
L+ + + P+ V +G K+ +KR E R + K + E K ++ R
Sbjct: 57 FRTCYLIWEQVTPVFVLEGVAPKLKSQVIAKRNELQFRGVKPKNSPECTQSQPSKGDKGR 116
Query: 381 SYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 560
S + + L M + C+ P EA+A A+LN + VI++DSD
Sbjct: 117 SRFNHVLKQCETLLLS-------MGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFA 169
Query: 561 FGCTXV 578
+G V
Sbjct: 170 YGAVRV 175
>AF125578-1|AAD47568.1| 1236|Drosophila melanogaster DNA repair
endonuclease protein.
Length = 1236
Score = 48.8 bits (111), Expect = 9e-06
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +3
Query: 282 AKAMTESKRR-ESRNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIXECRKMNV 458
A+A+ K E + ++ A E L +IE R R + I+ M++D R +
Sbjct: 815 AEALKSQKTSGELQEMATNLAQERKEL-EIERNRQD-RMGMSISQRMSIDCQELLRLFGI 872
Query: 459 DCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFG 566
IVAP EA+AQ A+LN ++ IT+DSD+ LFG
Sbjct: 873 PYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFG 908
Score = 47.6 bits (108), Expect = 2e-05
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEE-TDMHIKYC 209
MG+TGL IE + V G +A+D WLH+ D +G ++ H+
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVDISIWLHQVVKGFQDN--KGSALSNAHLLGL 58
Query: 210 LKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSL 359
+ LL ++P+ +FDG K T ++R++ RN A + +L
Sbjct: 59 FHRLCKLLYYRVRPVFIFDGCVPQLKRDTIARRQQQRNKLSNEADRIQAL 108
>AF162795-1|AAD51936.1| 725|Drosophila melanogaster mutant
nucleotide excision repairprotein mus201 protein.
Length = 725
Score = 47.6 bits (108), Expect = 2e-05
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +3
Query: 33 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEE-TDMHIKYC 209
MG+TGL IE + V G +A+D WLH+ D +G ++ H+
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVDISIWLHQVVKGFQDN--KGSALSNAHLLGL 58
Query: 210 LKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSL 359
+ LL ++P+ +FDG K T ++R++ RN A + +L
Sbjct: 59 FHRLCKLLYYRVRPVFIFDGCVPQLKRDTIARRQQQRNKLSNEADRIQAL 108
>AJ389385-1|CAB52135.1| 378|Drosophila melanogaster Nucleotide
excision repair protein protein.
Length = 378
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 417 MALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILFG 566
M++D R + IVAP EA+AQ A+LN ++ IT+DSD+ LFG
Sbjct: 1 MSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFG 50
>AY052070-1|AAK93494.1| 854|Drosophila melanogaster SD02572p
protein.
Length = 854
Score = 30.3 bits (65), Expect = 3.2
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 4/180 (2%)
Frame = +3
Query: 33 MGITGLIPFI-EKASRRTDVSEFSGCTVAIDS---YCWLHKGAFACADKLVRGEETDMHI 200
MG+ GL +I ++A E + ID C L+K G + D
Sbjct: 1 MGVRGLTSYIAQRAEIYLKPHELHSTALVIDGDNLSCNLYKDVTGSYSAF--GGDYDDFY 58
Query: 201 KYCLKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEAR 380
+ +++ +L NI+P ++ DG + + R+ R +S + ++ + KI
Sbjct: 59 RAVVQFFQVLAECNIRPYVLMDGGY---------EERKLRTVSTRLRNKISVIKKINPNA 109
Query: 381 SYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 560
S + + +D + +C + C+ +EAD +LA L + + V++ DSD +
Sbjct: 110 SITLFPLHLKEVF-VDAVRDCGVPVMRCV---FEADDELAAL-ARKLNCPVLSYDSDFYI 164
>AF047010-1|AAC05483.1| 815|Drosophila melanogaster asteroid
protein protein.
Length = 815
Score = 30.3 bits (65), Expect = 3.2
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 4/180 (2%)
Frame = +3
Query: 33 MGITGLIPFI-EKASRRTDVSEFSGCTVAIDS---YCWLHKGAFACADKLVRGEETDMHI 200
MG+ GL +I ++A E + ID C L+K G + D
Sbjct: 1 MGVRGLTSYIAQRAEIYLKPHELHSTALVIDGDNLSCNLYKDVTGSYSAF--GGDYDDFY 58
Query: 201 KYCLKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEAR 380
+ +++ +L NI+P ++ DG + + R+ R +S + ++ + KI
Sbjct: 59 RAVVQFFQVLAECNIRPYVLMDGGY---------EERKLRTVSTRLRNKISVIKKINPNA 109
Query: 381 SYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 560
S + + +D + +C + C+ +EAD +LA L + + V++ DSD +
Sbjct: 110 SITLFPLHLKEVF-VDAVRDCGVPVMRCV---FEADDELAAL-ARKLNCPVLSYDSDFYI 164
>AE014134-193|AAF51424.1| 854|Drosophila melanogaster CG4426-PA
protein.
Length = 854
Score = 30.3 bits (65), Expect = 3.2
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 4/180 (2%)
Frame = +3
Query: 33 MGITGLIPFI-EKASRRTDVSEFSGCTVAIDS---YCWLHKGAFACADKLVRGEETDMHI 200
MG+ GL +I ++A E + ID C L+K G + D
Sbjct: 1 MGVRGLTSYIAQRAEIYLKPHELHSTALVIDGDNLSCNLYKDVTGSYSAF--GGDYDDFY 58
Query: 201 KYCLKYMTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEAR 380
+ +++ +L NI+P ++ DG + + R+ R +S + ++ + KI
Sbjct: 59 RAVVQFFQVLAECNIRPYVLMDGGY---------EERKLRTVSTRLRNKISVIKKINPNA 109
Query: 381 SYLRRSVDITHAMALDLIXECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 560
S + + +D + +C + C+ +EAD +LA L + + V++ DSD +
Sbjct: 110 SITLFPLHLKEVF-VDAVRDCGVPVMRCV---FEADDELAAL-ARKLNCPVLSYDSDFYI 164
>AE014297-642|AAF54144.3| 191|Drosophila melanogaster CG11286-PA
protein.
Length = 191
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -1
Query: 647 FHYVRQLRMFNQSSCTMEIHFEEDXSTSKQYEIRIFSYH*LCYVLYVE 504
FH +++L + + ++ H E D S Y+I+ F Y CYV Y++
Sbjct: 68 FHRLQELDEWYEPR--IKFHDEADASLHPSYDIKHFQYDLNCYVRYLD 113
>BT001689-1|AAN71444.1| 364|Drosophila melanogaster RE58324p
protein.
Length = 364
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 432 IXECRKMNVDCIVAPYEADAQLAYLNIKNI 521
I C K+N D + P DA++ LN+ N+
Sbjct: 140 IYVCNKLNADLELEPLPEDAEMRLLNLDNV 169
>AE014134-776|AAF50978.3| 364|Drosophila melanogaster CG15628-PA
protein.
Length = 364
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 432 IXECRKMNVDCIVAPYEADAQLAYLNIKNI 521
I C K+N D + P DA++ LN+ N+
Sbjct: 140 IYVCNKLNADLELEPLPEDAEMRLLNLDNV 169
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,455,472
Number of Sequences: 53049
Number of extensions: 634268
Number of successful extensions: 1854
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1843
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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