Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1952
         (770 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1321|AAF54656.1| 1307|Drosophila melanogaster CG14709-P...    29   5.3  
AE014296-1942|AAF50071.2|  342|Drosophila melanogaster CG6168-PB...    29   5.3  

>AE014297-1321|AAF54656.1| 1307|Drosophila melanogaster CG14709-PA
            protein.
          Length = 1307

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 138  SGYKIIKTKTKSLGFYIICFCSHIILVCIYQF 43
            SGY       ++ G+Y+ CFC+  I++ I  +
Sbjct: 938  SGYYTFLATNRAFGYYLDCFCTLYIVIIILNY 969


>AE014296-1942|AAF50071.2|  342|Drosophila melanogaster CG6168-PB
           protein.
          Length = 342

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = -3

Query: 651 HLGFNDY*LPIF*PVSNTLPN**LRHSADDVIWSIFYN*YKDILLPQEMFILYWLSA 481
           HL F    +P+   +SN  P   + H A+DV  ++ YN  + + L   MF++ +L++
Sbjct: 279 HLPFTRRNVPVIHLISNKYPA--VWHQAEDVEMNVDYNTTEQVGLVLRMFVMEYLNS 333


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,719,987
Number of Sequences: 53049
Number of extensions: 559691
Number of successful extensions: 1097
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)