Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1947
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908 156 2e-38
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 103 2e-22
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 87 1e-17
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 85 4e-17
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 85 7e-17
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 79 5e-15
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 78 7e-15
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 75 5e-14
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 71 1e-12
02_01_0510 + 3703715-3705040 30 1.7
07_01_0989 + 8348706-8348882,8348988-8349028,8350071-8350120,835... 29 3.9
12_02_1084 - 25928373-25928426,25928551-25928652,25928913-259290... 28 6.9
11_06_0513 + 24466131-24469487 28 6.9
07_01_0724 + 5529642-5531141 28 6.9
05_01_0019 - 129767-129931,130078-130257,130491-130728,130833-13... 28 6.9
10_08_0625 + 19362303-19363853 28 9.1
06_03_0589 - 22572914-22573035,22573353-22573412,22573554-22573692 28 9.1
06_01_0462 - 3285667-3288123 28 9.1
05_05_0050 + 21916020-21916489,21916906-21917380,21917472-21918278 28 9.1
01_01_0840 - 6557931-6558377 28 9.1
>04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908
Length = 511
Score = 156 bits (378), Expect = 2e-38
Identities = 85/192 (44%), Positives = 119/192 (61%), Gaps = 2/192 (1%)
Frame = +1
Query: 175 IDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREA 354
+++ + + + ++CT+GPASR+V +LEK++ GMNVAR NFSHG+HEYH ET+ N R+A
Sbjct: 13 LENDDARVPKTKLVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLRQA 72
Query: 355 EKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKXGETIKLTTSSDYQEKGNA 534
+ + A+ LDTKGPEIRTG L+ G ++L G+ +LT ++DY+ KG+
Sbjct: 73 MHN------TGVLCAVMLDTKGPEIRTGFLKDG--KPIKLTKGQ--ELTVTTDYEIKGDE 122
Query: 535 DTIYVDYKNITNVVKPGNRIFIDDGLISIICQSV--SADTLTCTIENXXMLGSXKGVNLX 708
+ I + YK + VKPGN I DG IS+ S A T+ C EN MLG K NL
Sbjct: 123 NMITMSYKKLPVDVKPGNVILCADGTISLTVLSCDPKAGTVRCRCENTAMLGERKNCNLP 182
Query: 709 XIPVDLPAXSEK 744
I VDLP +EK
Sbjct: 183 GIVVDLPTLTEK 194
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 103 bits (246), Expect = 2e-22
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 8/190 (4%)
Frame = +1
Query: 199 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 378
R + I+CTIGP++ ++ K+ ETGMNVARMN SHG H+ H + I + K Y+AK
Sbjct: 89 RKTKIVCTIGPSTNTREMIWKLAETGMNVARMNMSHGDHQSHQKVI----DLVKEYNAKN 144
Query: 379 GSPFSLAIALDTK--GPEIRTGLLEG-----GGSAE-VELKXGETIKLTTSSDYQEKGNA 534
+AI LDTK + RT +++G G E + L+ G+ T K
Sbjct: 145 TDGNVIAIMLDTKQMSCDDRTSVMQGPEVRSGDVPEPIMLEEGQEFNFTIKRGVSTK--- 201
Query: 535 DTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENXXMLGSXKGVNLXXI 714
DT+ V+Y + N V+ G+ + +D G++S+ +S +ADT+ C + + L S + +N+
Sbjct: 202 DTVSVNYDDFINDVEVGDILLVDGGMMSLAVKSKTADTVKCEVVDGGELKSRRHLNVRGK 261
Query: 715 PVDLPAXSEK 744
LP+ +EK
Sbjct: 262 SATLPSITEK 271
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 87.4 bits (207), Expect = 1e-17
Identities = 58/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Frame = +1
Query: 202 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 381
++ I+ T+GP SR+V + ++ GM+VAR +FS G EYH ET+ N + A KS + KL
Sbjct: 1 MTKIVGTLGPKSRSVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKVAIKS-TKKL- 58
Query: 382 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKXGETIKLTTSSDYQEKGNADTIYVDYKN 561
A+ LDT GPE++ + A + L+ T+ LT D ++ ++ + +++
Sbjct: 59 ----CAVMLDTVGPELQ---VVNKSEASISLEENGTVILT--PDQGQEASSQVLPINFAG 109
Query: 562 ITNVVKPGNRIFIDDGLIS--------IICQSVSADTLTCTIENXXML-GSXKGVNLXXI 714
+ VKPG+ IF+ L + + + D + C I+N L GS ++ I
Sbjct: 110 LAKAVKPGDTIFVGQYLFTGSETTSVWLEVSQIKGDDVVCVIKNTATLAGSLFTLHCSQI 169
Query: 715 PVDLPAXSEK 744
+DLP S++
Sbjct: 170 HIDLPTLSDE 179
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 85.4 bits (202), Expect = 4e-17
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Frame = +1
Query: 181 SKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEK 360
SK + R + I+CTIGP++ ++ K+ E GMNVAR+N SHG H H + I + K
Sbjct: 108 SKPNVRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVI----DLVK 163
Query: 361 SYSAKLGSPFSLAIALDTKG-PEIRTGLLE-------GGGSAEVELKXG---ETIKLTTS 507
Y+A+ +AI LDTK E +LE G E++ G + I L T
Sbjct: 164 EYNAQTKDNV-IAIMLDTKSYTEYDVLMLECFFAVYASSGGIGPEVRSGDLPQPIMLETG 222
Query: 508 SDY-----QEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENX 672
++ + G + V+Y + N V+ G+ + +D G++S++ +S + D++ C + +
Sbjct: 223 QEFTFTIKRGVGTETCVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVIDG 282
Query: 673 XMLGSXKGVNLXXIPVDLPAXSEK 744
L S + +N+ LP+ ++K
Sbjct: 283 GELKSRRHLNVRGKSATLPSITDK 306
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 84.6 bits (200), Expect = 7e-17
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 9/190 (4%)
Frame = +1
Query: 202 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 381
++ I+ T+GP SR V + ++ GM+VAR +FS G EYH ET+ N + A KS + KL
Sbjct: 1 MTKIVGTLGPKSRAVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKLAIKS-TKKL- 58
Query: 382 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKXGETIKLTTSSDYQEKGNADTIYVDYKN 561
A+ LDT GPE++ + A + L+ T+ LT D ++ +++ + +++
Sbjct: 59 ----CAVMLDTVGPELQ---VVNKSEAAISLEANGTVVLT--PDQGQEASSELLPINFSG 109
Query: 562 ITNVVKPGNRIFIDDGLIS--------IICQSVSADTLTCTIENXXML-GSXKGVNLXXI 714
+ +KPG IF+ L + + V D + C I+N L GS ++ I
Sbjct: 110 LAKALKPGATIFVGQYLFTGSETTSVWLEVSEVKGDDVVCVIKNSATLAGSLFTLHCSQI 169
Query: 715 PVDLPAXSEK 744
+DLP S++
Sbjct: 170 HIDLPTLSDE 179
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 78.6 bits (185), Expect = 5e-15
Identities = 45/138 (32%), Positives = 73/138 (52%)
Frame = +1
Query: 199 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 378
R + ++CT+GPA+ LE + GMNVAR+N HG E+H IR R +
Sbjct: 99 RRTKLVCTVGPATCGADELEALAVGGMNVARVNMCHGDREWHRGVIRAVRRLNEE----- 153
Query: 379 GSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKXGETIKLTTSSDYQEKGNADTIYVDYK 558
F++A+ +DT+G EI G L GG+A + + GE + S ++ TI+V+Y+
Sbjct: 154 -KGFAVAVMMDTEGSEIHMGDL--GGAAAAKAEDGEIWTFSVRS-FEAPPPERTIHVNYE 209
Query: 559 NITNVVKPGNRIFIDDGL 612
V+ G+ + +D G+
Sbjct: 210 GFAEDVRVGDELLVDGGM 227
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 78.2 bits (184), Expect = 7e-15
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Frame = +1
Query: 406 LDTKGPEIRTGLLEGGGSAEVELKXGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPG 585
L +GPEIRTG L+ G V+LK G+ I T S+DY KG+ + I + YK + +KPG
Sbjct: 176 LKIQGPEIRTGFLKDG--KPVQLKKGQEI--TVSTDYSIKGDDNMISMSYKKLAVDLKPG 231
Query: 586 NRIFIDDGLISIICQSVSAD--TLTCTIENXXMLGSXKGVNLXXIPVDLPAXSEK 744
+ I DG I++ + + C EN MLG K VNL + VDLP +EK
Sbjct: 232 SVILCADGTITLTVLHCDKEQGLVRCRCENTAMLGERKNVNLPGVIVDLPTLTEK 286
Score = 74.9 bits (176), Expect = 6e-14
Identities = 37/78 (47%), Positives = 51/78 (65%)
Frame = +1
Query: 211 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 390
I+CT+GPASR+V ++ +++ GM VAR NFSHGSHEYH ET+ N R A +S +
Sbjct: 23 IVCTLGPASRSVEMIGRLLRAGMCVARFNFSHGSHEYHQETLDNLRAAMES------TGI 76
Query: 391 SLAIALDTKGPEIRTGLL 444
A+ LDTK + G+L
Sbjct: 77 LCAVMLDTKARDFVLGVL 94
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 75.4 bits (177), Expect = 5e-14
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Frame = +1
Query: 418 GPEIRTGLLEGGGSAEVELKXGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIF 597
GPEIRTG L+ G ++LK G+ I +T DY KG+ + I + Y + +KPG+ I
Sbjct: 71 GPEIRTGFLKDG--KPIQLKQGKEITITI--DYSIKGDENLISMSYHKLAIDLKPGSTIL 126
Query: 598 IDDGLISIICQSVSADT--LTCTIENXXMLGSXKGVNLXXIPVDLPAXSEK 744
DG I++ S + + C EN MLG K VNL + VDLP +EK
Sbjct: 127 CADGTITLTVLSCDCEQGLVRCRCENSAMLGERKNVNLPGVIVDLPTLTEK 177
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 70.5 bits (165), Expect = 1e-12
Identities = 45/139 (32%), Positives = 75/139 (53%)
Frame = +1
Query: 202 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 381
L+ I+ T+GP S +V V+++ + GM VAR +FS YH ET+ N R+A ++ + KL
Sbjct: 29 LTKIVGTLGPNSHSVEVIQECLTAGMAVARFDFSWMDASYHQETLNNLRKAAQNVN-KL- 86
Query: 382 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKXGETIKLTTSSDYQEKGNADTIYVDYKN 561
+ LDT GPEI+ GG +ELK G + +T D + +++ + + +
Sbjct: 87 ----CPVMLDTLGPEIQVHNSTGG---PIELKAGNHVTIT--PDLSKAPSSEILPIKFGG 137
Query: 562 ITNVVKPGNRIFIDDGLIS 618
+ VK G+ +FI L +
Sbjct: 138 LAKAVKKGDTLFIGQYLFT 156
>02_01_0510 + 3703715-3705040
Length = 441
Score = 30.3 bits (65), Expect = 1.7
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 383 HPSLWPSHWTLKD 421
HP LWP HW +KD
Sbjct: 192 HPFLWPDHWPVKD 204
>07_01_0989 +
8348706-8348882,8348988-8349028,8350071-8350120,
8350502-8350646,8351570-8351626,8352141-8352261,
8352436-8352945,8353242-8353289
Length = 382
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 455 PPPSKSPVLISGPLVSNAMAKEKGEPSL 372
PPP+ SP L S P+ S +++EK +L
Sbjct: 335 PPPNPSPSLASAPVYSPVLSREKVRDAL 362
>12_02_1084 -
25928373-25928426,25928551-25928652,25928913-25929039,
25929292-25930730,25931430-25931447
Length = 579
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 184 KSSYIRLSGIICTIGPASRNVAVLEK 261
K + IRL+ IIC P + VAVL+K
Sbjct: 481 KRNEIRLTNIICQFNPLVQQVAVLKK 506
>11_06_0513 + 24466131-24469487
Length = 1118
Score = 28.3 bits (60), Expect = 6.9
Identities = 24/94 (25%), Positives = 43/94 (45%)
Frame = +1
Query: 97 MAFAGAVEKPTVANVGSQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETG 276
+++AG +AN QL+ + + I IRL + C+ P + LE + +G
Sbjct: 874 ISYAGETFPCWMANTNPQLKKLTQIRI------IRLINLKCSSLPPLGQLHQLETLEISG 927
Query: 277 MNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 378
MN + S E +A+T R+ ++ S+ L
Sbjct: 928 MNAIKNVSSELHGELNADTFRSLKKIVFSHMVNL 961
>07_01_0724 + 5529642-5531141
Length = 499
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 252 AREDDGDGNERGKDELLARFP*VPRRDHSQLSRGREELQ 368
AR+DDGDG+ RG+D A + + +R E+Q
Sbjct: 434 ARDDDGDGSFRGEDVAAAVRRVMAEEEGKVFARNAREMQ 472
>05_01_0019 -
129767-129931,130078-130257,130491-130728,130833-131236,
131284-131427,131709-131995,132071-132150,132563-132714,
132793-132909,133292-133450,133546-133946,134106-134423,
135050-135095,135203-135310
Length = 932
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -1
Query: 249 SYITGCRSNSTDYSRETNVRRLGVNVEAAHMLELGADVGDCRLFNCTRESHGYV 88
S I+ S + SR VR + N+E + + L GD R+ + + HG+V
Sbjct: 256 SQISSGHSINKQPSRTLVVRNITANIEDSDLTVLFQQYGDIRMLYTSFKHHGFV 309
>10_08_0625 + 19362303-19363853
Length = 516
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1
Query: 463 EVELKXGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSA 642
E + GET K T E DT+ +D K + + GNR DD +I + + ++A
Sbjct: 260 EYKKHGGETTKTTNKETTLEHSYVDTL-LDIK----LPEDGNRALTDDEIIKLCSEFLNA 314
Query: 643 DTLT 654
T T
Sbjct: 315 GTDT 318
>06_03_0589 - 22572914-22573035,22573353-22573412,22573554-22573692
Length = 106
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -2
Query: 485 SPFFSSTSAEPPPSKSPVLISGPLVSNAMAKEKGEPSLAL*LFSASRQLRMVS 327
SP + S+ PPS +PV + G + A A + E S A+ + S++ RM S
Sbjct: 8 SPIPVAYSSGDPPSATPVPVPGSDLPAAPAAKSQEASPAVPVIDPSKEERMGS 60
>06_01_0462 - 3285667-3288123
Length = 818
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 484 ETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGL 612
E K S+Y E G+ D + DY N+ V+K R I G+
Sbjct: 598 EKTKRLLVSEYSENGSLDRLLFDYHNLFPVLKWSQRYNIALGV 640
>05_05_0050 + 21916020-21916489,21916906-21917380,21917472-21918278
Length = 583
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Frame = -1
Query: 615 DEAIIDEDSVSWLHDIRY------VLVVHVNCISIA---FLLIIRTCRQLYSLSXLQFDF 463
+E I ++ WLHD+ L H+ +++ L+ + C+ L SL DF
Sbjct: 165 EECSIADNGTEWLHDLAVNNPVLETLNFHMTELTVVPADLELLAKKCKSLISLKISDCDF 224
Query: 462 S*AAAFQEPSSDLRSFS 412
S F ++ L+ F+
Sbjct: 225 SDLIGFFRMAASLQEFA 241
>01_01_0840 - 6557931-6558377
Length = 148
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 267 GDGNERGKDELLARFP*VPRRDHSQLSR 350
GDG RG+D L R+P + RR S +R
Sbjct: 120 GDGKRRGRDGGLRRWPGMTRRRRSSSAR 147
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,185,579
Number of Sequences: 37544
Number of extensions: 387901
Number of successful extensions: 1303
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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