BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1945
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004486-1|AAO42650.1| 447|Drosophila melanogaster LD24467p pro... 46 5e-05
AF220045-1|AAF24518.1| 447|Drosophila melanogaster serpin 27A p... 46 5e-05
AE014134-1135|AAF52420.1| 447|Drosophila melanogaster CG11331-P... 46 5e-05
BT010110-1|AAQ22579.1| 372|Drosophila melanogaster GH04125p pro... 43 3e-04
AJ251744-1|CAB63096.1| 372|Drosophila melanogaster serine prote... 43 3e-04
AE013599-255|AAF57408.2| 372|Drosophila melanogaster CG9456-PA ... 43 3e-04
AY061542-1|AAL29090.2| 653|Drosophila melanogaster LP03106p pro... 40 0.003
AE014297-4649|AAF57075.1| 649|Drosophila melanogaster CG1342-PA... 40 0.003
AE014134-1363|AAF52578.3| 346|Drosophila melanogaster CG33121-P... 40 0.003
BT022903-1|AAY55319.1| 388|Drosophila melanogaster IP12608p pro... 39 0.006
BT022893-1|AAY55309.1| 389|Drosophila melanogaster IP12508p pro... 39 0.006
BT022862-1|AAY55278.1| 388|Drosophila melanogaster IP12708p pro... 39 0.006
BT022219-1|AAY54635.1| 388|Drosophila melanogaster IP12408p pro... 39 0.006
AE014134-1362|ABI31299.1| 384|Drosophila melanogaster CG31902-P... 39 0.006
AE014297-1063|AAF54473.3| 640|Drosophila melanogaster CG12807-P... 31 1.1
X04813-1|CAA28502.1| 2236|Drosophila melanogaster protein ( Dros... 31 1.5
L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h... 29 4.6
BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p pro... 29 4.6
BT009980-1|AAQ22449.1| 1105|Drosophila melanogaster RE54143p pro... 29 4.6
AY260056-2|AAO85036.1| 1413|Drosophila melanogaster Hmr protein. 29 4.6
AY260055-2|AAO85034.1| 1413|Drosophila melanogaster Hmr protein. 29 4.6
AY260051-1|AAO84261.1| 1413|Drosophila melanogaster Hmr protein. 29 4.6
AY122213-1|AAM52725.1| 393|Drosophila melanogaster LP08647p pro... 29 4.6
AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p pro... 29 4.6
AJ245442-1|CAB56695.1| 390|Drosophila melanogaster serpin, puta... 29 4.6
AF132191-1|AAD34779.1| 1013|Drosophila melanogaster unknown prot... 29 4.6
AE014298-1470|AAF46605.2| 1413|Drosophila melanogaster CG1619-PB... 29 4.6
AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ... 29 4.6
AE013599-307|AAF59289.1| 390|Drosophila melanogaster CG12172-PA... 29 4.6
AY260057-2|AAO85038.1| 1413|Drosophila melanogaster Hmr protein. 29 6.1
>BT004486-1|AAO42650.1| 447|Drosophila melanogaster LD24467p
protein.
Length = 447
Score = 46.0 bits (104), Expect = 5e-05
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Frame = +1
Query: 403 YWDLDEFHPSAAN-FDKFDWTLTKRVAA--VSGDNFLISPLGLKLALAILTEAATG--NT 567
Y D+D F P ++ D F W L K V + N +ISP +KL LA+L EAA T
Sbjct: 59 YDDIDTFVPFRSDSHDPFSWHLLKTVLQNETADKNVIISPFSVKLVLALLAEAAGAGTQT 118
Query: 568 KLELSSVLGFALDRREVRIKFSTIIDSLXKQNPXY-VLNLGSRIY 699
++EL++ + VR + ++S K+N + L++ ++++
Sbjct: 119 QVELANTQTDIRSQNNVREFYRKTLNSFKKENQLHETLSVRTKLF 163
>AF220045-1|AAF24518.1| 447|Drosophila melanogaster serpin 27A
protein.
Length = 447
Score = 46.0 bits (104), Expect = 5e-05
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Frame = +1
Query: 403 YWDLDEFHPSAAN-FDKFDWTLTKRVAA--VSGDNFLISPLGLKLALAILTEAATG--NT 567
Y D+D F P ++ D F W L K V + N +ISP +KL LA+L EAA T
Sbjct: 59 YDDIDTFVPFRSDSHDPFSWHLLKTVLQNETADKNVIISPFSVKLVLALLAEAAGAGTQT 118
Query: 568 KLELSSVLGFALDRREVRIKFSTIIDSLXKQNPXY-VLNLGSRIY 699
++EL++ + VR + ++S K+N + L++ ++++
Sbjct: 119 QVELANTQTDIRSQNNVREFYRKTLNSFKKENQLHETLSVRTKLF 163
>AE014134-1135|AAF52420.1| 447|Drosophila melanogaster CG11331-PA
protein.
Length = 447
Score = 46.0 bits (104), Expect = 5e-05
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Frame = +1
Query: 403 YWDLDEFHPSAAN-FDKFDWTLTKRVAA--VSGDNFLISPLGLKLALAILTEAATG--NT 567
Y D+D F P ++ D F W L K V + N +ISP +KL LA+L EAA T
Sbjct: 59 YDDIDTFVPFRSDSHDPFSWHLLKTVLQNETADKNVIISPFSVKLVLALLAEAAGAGTQT 118
Query: 568 KLELSSVLGFALDRREVRIKFSTIIDSLXKQNPXY-VLNLGSRIY 699
++EL++ + VR + ++S K+N + L++ ++++
Sbjct: 119 QVELANTQTDIRSQNNVREFYRKTLNSFKKENQLHETLSVRTKLF 163
>BT010110-1|AAQ22579.1| 372|Drosophila melanogaster GH04125p
protein.
Length = 372
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 487 SGDNFLISPLGLKLALAILTEAATGNTKLELSSVLGF-ALDRREVRIKFSTIIDSLXKQN 663
+ N ++SP+ ++ L+++ A G+T EL S LG + D+ V ++ +++ L Q
Sbjct: 30 TNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSEDKEAVAARYGALLNDLQGQE 89
Query: 664 PXYVLNLGSRIY 699
+L L +RIY
Sbjct: 90 EGPILKLANRIY 101
>AJ251744-1|CAB63096.1| 372|Drosophila melanogaster serine
proteinase inhibitor (serpin-1) protein.
Length = 372
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 487 SGDNFLISPLGLKLALAILTEAATGNTKLELSSVLGF-ALDRREVRIKFSTIIDSLXKQN 663
+ N ++SP+ ++ L+++ A G+T EL S LG + D+ V ++ +++ L Q
Sbjct: 30 TNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSEDKEAVAARYGALLNDLQGQE 89
Query: 664 PXYVLNLGSRIY 699
+L L +RIY
Sbjct: 90 EGPILKLANRIY 101
>AE013599-255|AAF57408.2| 372|Drosophila melanogaster CG9456-PA
protein.
Length = 372
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 487 SGDNFLISPLGLKLALAILTEAATGNTKLELSSVLGF-ALDRREVRIKFSTIIDSLXKQN 663
+ N ++SP+ ++ L+++ A G+T EL S LG + D+ V ++ +++ L Q
Sbjct: 30 TNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSEDKEAVAARYGALLNDLQGQE 89
Query: 664 PXYVLNLGSRIY 699
+L L +RIY
Sbjct: 90 EGPILKLANRIY 101
>AY061542-1|AAL29090.2| 653|Drosophila melanogaster LP03106p
protein.
Length = 653
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 496 NFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLXKQNPXYV 675
N + SPLG+ LA+L EA+ G+T E V G+ DR ++R + I+ S ++
Sbjct: 58 NQVHSPLGVASILAMLAEASEGDTYSEFEQVFGYPKDRTKLRDAYKRILGSYQNRDAAVA 117
Query: 676 L 678
L
Sbjct: 118 L 118
>AE014297-4649|AAF57075.1| 649|Drosophila melanogaster CG1342-PA
protein.
Length = 649
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 496 NFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLXKQNPXYV 675
N + SPLG+ LA+L EA+ G+T E V G+ DR ++R + I+ S ++
Sbjct: 54 NQVHSPLGVASILAMLAEASEGDTYSEFEQVFGYPKDRTKLRDAYKRILGSYQNRDAAVA 113
Query: 676 L 678
L
Sbjct: 114 L 114
>AE014134-1363|AAF52578.3| 346|Drosophila melanogaster CG33121-PA
protein.
Length = 346
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +1
Query: 496 NFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLXKQN 663
NF+ SPL +++ ++++ A G T EL SVL +D E+ K+ I+ + K N
Sbjct: 7 NFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPVDVTEMAKKYERIMSNFQKHN 62
>BT022903-1|AAY55319.1| 388|Drosophila melanogaster IP12608p
protein.
Length = 388
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = +1
Query: 496 NFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLXKQNPXYV 675
N + SPL +++ ++++ A GNT EL + L D++ V + ++ L + +
Sbjct: 37 NIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDKKNVATIYDKLLTKLERGKKVAI 96
Query: 676 LNLGSRIY 699
L+L +R++
Sbjct: 97 LHLANRLF 104
>BT022893-1|AAY55309.1| 389|Drosophila melanogaster IP12508p
protein.
Length = 389
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = +1
Query: 496 NFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLXKQNPXYV 675
N + SPL +++ ++++ A GNT EL + L D++ V + ++ L + +
Sbjct: 38 NIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDKKNVATIYDKLLTKLERGKKVAI 97
Query: 676 LNLGSRIY 699
L+L +R++
Sbjct: 98 LHLANRLF 105
>BT022862-1|AAY55278.1| 388|Drosophila melanogaster IP12708p
protein.
Length = 388
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = +1
Query: 496 NFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLXKQNPXYV 675
N + SPL +++ ++++ A GNT EL + L D++ V + ++ L + +
Sbjct: 37 NIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDKKNVATIYDKLLTKLERGKKVAI 96
Query: 676 LNLGSRIY 699
L+L +R++
Sbjct: 97 LHLANRLF 104
>BT022219-1|AAY54635.1| 388|Drosophila melanogaster IP12408p
protein.
Length = 388
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = +1
Query: 496 NFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLXKQNPXYV 675
N + SPL +++ ++++ A GNT EL + L D++ V + ++ L + +
Sbjct: 37 NIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDKKNVATIYDKLLTKLERGKKVAI 96
Query: 676 LNLGSRIY 699
L+L +R++
Sbjct: 97 LHLANRLF 104
>AE014134-1362|ABI31299.1| 384|Drosophila melanogaster CG31902-PB
protein.
Length = 384
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = +1
Query: 496 NFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLXKQNPXYV 675
N + SPL +++ ++++ A GNT EL + L D++ V + ++ L + +
Sbjct: 33 NIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDKKNVATIYDKLLTKLERGKKVAI 92
Query: 676 LNLGSRIY 699
L+L +R++
Sbjct: 93 LHLANRLF 100
>AE014297-1063|AAF54473.3| 640|Drosophila melanogaster CG12807-PA
protein.
Length = 640
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 493 DNFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTI 639
+NF SP L L L E + GNT EL VL +R R+ + I
Sbjct: 87 NNFAFSPTALVSVLVALFEGSAGNTAEELRHVLQLPNNRDVTRVGYRDI 135
>X04813-1|CAA28502.1| 2236|Drosophila melanogaster protein (
Drosophila melanogasterrudimentary gene. ).
Length = 2236
Score = 31.1 bits (67), Expect = 1.5
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Frame = +1
Query: 295 VFGYGSTYSPIGAVAT-----ETYRQVVAVTPYNETLVDPDYWDLDEFHPSAANFDKFDW 459
V+ GS+ IG+V + R + + YN V DY D + +F+++ W
Sbjct: 961 VYRIGSSVEFIGSVGCLRELRKLQRPTIMIN-YNPETVSTDYDMCDRLYFEEISFEEWSW 1019
Query: 460 TLTK-RVAAVSGDNFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFST 636
T T+ R+A S P+G +L I + + + E+ ++D E R KFS
Sbjct: 1020 TSTRWRIARAS-----FCPMGGQLPNNIAMDL---HRQQEVLGTSPESIDCAENRFKFSR 1071
Query: 637 IID 645
++D
Sbjct: 1072 MLD 1074
>L77907-1|AAC37264.1| 1883|Drosophila melanogaster
chromodomain-helicase-DNA-bindingprotein protein.
Length = 1883
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = -1
Query: 274 LCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQKKPESKK-RTKLKAIL 134
LC + Q I +EQ K+ TL + +++ N +KP++K+ +T+ + +L
Sbjct: 1333 LCGIYQYGIGSWEQMKLDPTLKLTDKILLNDTRKPQAKQLQTRAEYLL 1380
>BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p protein.
Length = 1645
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = -1
Query: 274 LCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQKKPESKK-RTKLKAIL 134
LC + Q I +EQ K+ TL + +++ N +KP++K+ +T+ + +L
Sbjct: 1333 LCGIYQYGIGSWEQMKLDPTLKLTDKILLNDTRKPQAKQLQTRAEYLL 1380
>BT009980-1|AAQ22449.1| 1105|Drosophila melanogaster RE54143p
protein.
Length = 1105
Score = 29.5 bits (63), Expect = 4.6
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -1
Query: 304 NRTHLLGCSDLCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQKKPESKKRTKLKAI 137
+R +G S+LC L M+ +E Q+M T+ KSS+ + NG +P T + I
Sbjct: 77 HRPRHIGTSELCRL--MDFMEPHVQRMRGTVCKSSKYLQNGWHEPIENFHTVMALI 130
>AY260056-2|AAO85036.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 29.5 bits (63), Expect = 4.6
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -1
Query: 304 NRTHLLGCSDLCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQKKPESKKRTKLKAI 137
+R +G S+LC L M+ +E Q+M T+ KSS+ + NG +P T + I
Sbjct: 273 HRPRHIGTSELCRL--MDFMEPHVQRMRGTVCKSSKYLQNGWHEPIENFHTVMALI 326
>AY260055-2|AAO85034.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 29.5 bits (63), Expect = 4.6
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -1
Query: 304 NRTHLLGCSDLCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQKKPESKKRTKLKAI 137
+R +G S+LC L M+ +E Q+M T+ KSS+ + NG +P T + I
Sbjct: 273 HRPRHIGTSELCRL--MDFMEPHVQRMRGTVCKSSKYLQNGWHEPIENFHTVMALI 326
>AY260051-1|AAO84261.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 29.5 bits (63), Expect = 4.6
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -1
Query: 304 NRTHLLGCSDLCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQKKPESKKRTKLKAI 137
+R +G S+LC L M+ +E Q+M T+ KSS+ + NG +P T + I
Sbjct: 273 HRPRHIGTSELCRL--MDFMEPHVQRMRGTVCKSSKYLQNGWHEPIENFHTVMALI 326
>AY122213-1|AAM52725.1| 393|Drosophila melanogaster LP08647p
protein.
Length = 393
Score = 29.5 bits (63), Expect = 4.6
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 493 DNFLISPLGLKLALAILTEAATGNTKLELSSVL-GFALDRRE-VRIKFSTIIDSLXKQNP 666
+N +ISP+ ++LAL + A G T EL L A + ++ + + ++ S K
Sbjct: 48 ENVIISPVSIQLALGLAYYGAEGRTAAELQKTLHASAKESKDGLAESYHNLLHSYIKSKT 107
Query: 667 XYVLNLGSRIY 699
VL + +++Y
Sbjct: 108 --VLEIANKVY 116
>AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p
protein.
Length = 1101
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = -1
Query: 274 LCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQKKPESKK-RTKLKAIL 134
LC + Q I +EQ K+ TL + +++ N +KP++K+ +T+ + +L
Sbjct: 801 LCGIYQYGIGSWEQMKLDPTLKLTDKILLNDTRKPQAKQLQTRAEYLL 848
>AJ245442-1|CAB56695.1| 390|Drosophila melanogaster serpin,
putative protein.
Length = 390
Score = 29.5 bits (63), Expect = 4.6
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 493 DNFLISPLGLKLALAILTEAATGNTKLELSSVL-GFALDRRE-VRIKFSTIIDSLXKQNP 666
+N +ISP+ ++LAL + A G T EL L A + ++ + + ++ S K
Sbjct: 45 ENVIISPVSIQLALGLAYYGAEGRTAAELQKTLHASAKESKDGLAESYHNLLHSYIKSKT 104
Query: 667 XYVLNLGSRIY 699
VL + +++Y
Sbjct: 105 --VLEIANKVY 113
>AF132191-1|AAD34779.1| 1013|Drosophila melanogaster unknown
protein.
Length = 1013
Score = 29.5 bits (63), Expect = 4.6
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -1
Query: 304 NRTHLLGCSDLCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQKKPESKKRTKLKAI 137
+R +G S+LC L M+ +E Q+M T+ KSS+ + NG +P T + I
Sbjct: 17 HRPRHIGTSELCRL--MDFMEPHVQRMRGTVCKSSKYLQNGWHEPIENFHTVMALI 70
>AE014298-1470|AAF46605.2| 1413|Drosophila melanogaster CG1619-PB
protein.
Length = 1413
Score = 29.5 bits (63), Expect = 4.6
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -1
Query: 304 NRTHLLGCSDLCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQKKPESKKRTKLKAI 137
+R +G S+LC L M+ +E Q+M T+ KSS+ + NG +P T + I
Sbjct: 273 HRPRHIGTSELCRL--MDFMEPHVQRMRGTVCKSSKYLQNGWHEPIENFHTVMALI 326
>AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA
protein.
Length = 1883
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = -1
Query: 274 LCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQKKPESKK-RTKLKAIL 134
LC + Q I +EQ K+ TL + +++ N +KP++K+ +T+ + +L
Sbjct: 1333 LCGIYQYGIGSWEQMKLDPTLKLTDKILLNDTRKPQAKQLQTRAEYLL 1380
>AE013599-307|AAF59289.1| 390|Drosophila melanogaster CG12172-PA
protein.
Length = 390
Score = 29.5 bits (63), Expect = 4.6
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 493 DNFLISPLGLKLALAILTEAATGNTKLELSSVL-GFALDRRE-VRIKFSTIIDSLXKQNP 666
+N +ISP+ ++LAL + A G T EL L A + ++ + + ++ S K
Sbjct: 45 ENVIISPVSIQLALGLAYYGAEGRTAAELQKTLHASAKESKDGLAESYHNLLHSYIKSKT 104
Query: 667 XYVLNLGSRIY 699
VL + +++Y
Sbjct: 105 --VLEIANKVY 113
>AY260057-2|AAO85038.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -1
Query: 304 NRTHLLGCSDLCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQKKPESKKRTKLKAI 137
+R +G S+LC L M +E Q+M T+ KSS+ + NG +P T + I
Sbjct: 273 HRPRHIGTSELCRL--MGFMEPHVQRMRGTVCKSSKYLQNGWHEPIENFHTVMALI 326
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,775,275
Number of Sequences: 53049
Number of extensions: 623665
Number of successful extensions: 1743
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1743
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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