Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1945
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 34 0.085
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 34 0.085
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 33 0.26
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 33 0.26
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 30 1.4
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 30 1.8
AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or cys... 30 1.8
AC006769-11|AAF60586.1| 340|Caenorhabditis elegans Seven tm rec... 27 9.8
AC006645-4|AAF39845.2| 340|Caenorhabditis elegans Seven tm rece... 27 9.8
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 34.3 bits (75), Expect = 0.085
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +1
Query: 493 DNFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLXKQNPXY 672
++F+ SPL + LAL+++ AA G T+ E+ L E+ FS I L
Sbjct: 32 ESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGT 91
Query: 673 VLNLGSRIY 699
+N+ + I+
Sbjct: 92 EVNVANHIF 100
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 34.3 bits (75), Expect = 0.085
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +1
Query: 493 DNFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLXKQNPXY 672
++F+ SPL + LAL+++ AA G T+ E+ L E+ FS I L
Sbjct: 32 ESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGT 91
Query: 673 VLNLGSRIY 699
+N+ + I+
Sbjct: 92 EVNVANHIF 100
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 454 DWTLTKRVAAVSGDNFLISPLGLKLALAILTEAATGNTKLELSSVLG 594
D+ L + ++SPL + L LA++ A G+T+ EL VLG
Sbjct: 10 DFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLG 56
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 454 DWTLTKRVAAVSGDNFLISPLGLKLALAILTEAATGNTKLELSSVLG 594
D+ L + ++SPL + L LA++ A G+T+ EL VLG
Sbjct: 10 DFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLG 56
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/90 (24%), Positives = 34/90 (37%)
Frame = -3
Query: 593 PSTDDSSNFVLPVAASVSIANANFRPRGEIKKLSPETAATRLVRVQSNLSKFAADGWNSS 414
PST S AS + + G P TA+ V S S + S
Sbjct: 529 PSTTSGSTVSTTPGASTTSGSTQSTTSGPSTSSGPSTASRSTVSTTSGPSTTSGPSTTSG 588
Query: 413 KSQ*SGSTRVSLYGVTATTCR*VSVATAPI 324
S SGST+ + G + T+ + +S + +
Sbjct: 589 PSTTSGSTKSTTSGPSTTSGKNISTVSGKL 618
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 496 NFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSL 651
+F+ SP+ + LAL L EAA G T+ ++ L E+ FS + +L
Sbjct: 25 SFVFSPIAISLALYSLYEAARGETRSQIHDCLFKNATDGEMVTHFSNVSTAL 76
>AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 199
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 496 NFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSL 651
+F+ SP+ + LAL L EAA G T+ ++ L E+ FS + +L
Sbjct: 24 SFVFSPIAISLALYSLYEAARGETRSQIHDCLFKNATDGEMVTHFSNVSTAL 75
>AC006769-11|AAF60586.1| 340|Caenorhabditis elegans Seven tm
receptor protein 154 protein.
Length = 340
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = -3
Query: 638 IVLNFIRTSLLSRAKPSTDDSSNFVLPVAASVSIANANFRPRGEIKKLSPETAATRLVRV 459
+V+NFI +L+ + P S ++L + +SIA A F + ++ LV +
Sbjct: 20 VVVNFILITLVVTSSPRKMGSYKYLLIYCSGLSIAYAAFHFVAAPYMFNDDSTVVILVDL 79
Query: 458 QSNL 447
+SN+
Sbjct: 80 KSNM 83
>AC006645-4|AAF39845.2| 340|Caenorhabditis elegans Seven tm
receptor protein 267 protein.
Length = 340
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = -3
Query: 638 IVLNFIRTSLLSRAKPSTDDSSNFVLPVAASVSIANANFRPRGEIKKLSPETAATRLVRV 459
+V+NFI +L+ + P S ++L + +SIA A F + ++ LV +
Sbjct: 20 VVVNFILITLVVTSSPRKMGSYKYLLIYCSGLSIAYAAFHFVAAPYMFNDDSTVVILVDL 79
Query: 458 QSNL 447
+SN+
Sbjct: 80 KSNM 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,426,552
Number of Sequences: 27780
Number of extensions: 320619
Number of successful extensions: 1025
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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