Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1944
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.69
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 31 0.91
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 30 1.6
Z99273-4|CAB16479.1| 124|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z74043-10|CAA98542.2| 653|Caenorhabditis elegans Hypothetical p... 30 2.1
Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 29 2.8
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 29 4.8
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 29 4.8
Z81052-5|CAB02876.1| 512|Caenorhabditis elegans Hypothetical pr... 28 8.5
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 28 8.5
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.69
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 2 SSSSCTPVISL-TSWPFSXPTDLVASTHXTKCRLSSALLL*TVNTSSRSTVATSPSQETV 178
S+S+ T +S TS P + T ST T +S T SS ST+ +SPS T+
Sbjct: 299 STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSS-STITSSPSSTTL 357
Query: 179 ATYWRTTTSIE 211
+T TTT+ E
Sbjct: 358 STSIPTTTTPE 368
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.69
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 2 SSSSCTPVISL-TSWPFSXPTDLVASTHXTKCRLSSALLL*TVNTSSRSTVATSPSQETV 178
S+S+ T +S TS P + T ST T +S T SS ST+ +SPS T+
Sbjct: 299 STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSS-STITSSPSSTTL 357
Query: 179 ATYWRTTTSIE 211
+T TTT+ E
Sbjct: 358 STSIPTTTTPE 368
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 31.1 bits (67), Expect = 0.91
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 2 SSSSCTPVISLTSWPFSXP-TDLVASTHXTKCRLSSALLL*TVNTSSRS-TVATSPSQET 175
S+S TP +LTS + P T + T T+ S L +TSS + + TSP+ T
Sbjct: 921 STSQSTPSATLTSTTENIPSTSKIPETSTTQRPTSPILTSGATSTSSSTESTTTSPTTST 980
Query: 176 VATYWRTTTSIETS 217
T TTT S
Sbjct: 981 TTTLPPTTTPYNLS 994
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 8 SSCTPVISLTSWPFSXPTDLVASTHXTKCRLSSALLL*TVNT--SSRSTVATSPSQETVA 181
SS T V T + P ST T+ +++ T T +S ST++T+ + T
Sbjct: 250 SSLTAVPGTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTTP 309
Query: 182 TYWRTTTSIETS 217
T TTTS TS
Sbjct: 310 TTTTTTTSTTTS 321
>Z99273-4|CAB16479.1| 124|Caenorhabditis elegans Hypothetical
protein Y45F10C.4 protein.
Length = 124
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +2
Query: 158 SPSQETVATYWRTTTSIETSRC*SNFKTENPRLL-FWKIRAELSSN*KKMDRLF*TELPK 334
S S +++ W+ S+ ++ KT N + WK+ ++ + + ++
Sbjct: 19 SGSFSSISEEWKAVCECNLSKLNNHAKTGNCKTTALWKVTSDTNCTASEYLKITVFPAND 78
Query: 335 DSRSSKRMCSLSVNQATESVLAHCTVSWSSAHL 433
D + C+++ TE A C V++S+A L
Sbjct: 79 DPLNRVEQCTMTPCDQTEKTPADCNVAFSAAKL 111
>Z74043-10|CAA98542.2| 653|Caenorhabditis elegans Hypothetical
protein T19B10.3 protein.
Length = 653
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = +1
Query: 112 VVVNGQHIFTFDGRHLTFPGNCRYVLAHDHVDRNFTLLIQLQNGKPKALILEDKSGAIIE 291
V +NG++I T R+ N + + N ++ G+ + D+ G + +
Sbjct: 458 VYLNGKYIDTLTRRYYNLTRNSVIIEGCLENEENRLFMLVENQGRKTFETINDRKGILSD 517
Query: 292 LKENGQAILNGASKGFPIIEKDVFAFRQ 375
+ NGQAI G + ++ F FR+
Sbjct: 518 VFMNGQAIQFWTQCGIKLPLQEDFYFRK 545
>Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical
protein F46B3.1 protein.
Length = 186
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Frame = +2
Query: 14 CTPVISLTSW---PFSXPTDLVASTHXTKCRLSSALLL*TVNTSSRSTVATSP 163
C P I + W P + H TKC LS L V T + +T T+P
Sbjct: 88 CPPAICVDQWDNCPLYKLINQCTRYHKTKCPLSCGLCTGNVTTPATTTSTTTP 140
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +2
Query: 5 SSSCTPVISLTSWPFSXPTDLVASTHXTKCRLSSALLL*TVNTSSRSTVATSPSQETVAT 184
S++ T S+T+ S P+ + ++T S+ + + +S T +T+P+ + +T
Sbjct: 146 SATSTSTTSITTSTLSPPSTVQSTTTAKPTTTSTITPTTSADPTSTITTSTTPNPSSPST 205
Query: 185 YWRTTTSIETS 217
TTT+ TS
Sbjct: 206 VQSTTTAEPTS 216
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
K03H1.5 protein.
Length = 1385
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 488 GLLGDGNNEPYDDFXLPNGKI 550
GLLG NN+P DD P+G +
Sbjct: 1036 GLLGTYNNDPADDLTTPSGTV 1056
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 5 SSSCTPVISLTSWPFSXPTDLVASTHXTKCRLSSALLL*TVNTSSRSTVATS-PSQETVA 181
++S P S TS P T T T+ SS + T T++ T +T PS T
Sbjct: 129 TTSTEPPSSSTS-PVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSP 187
Query: 182 TYWRTTTSIETS 217
TTT+ ET+
Sbjct: 188 VQTTTTTAPETT 199
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 5 SSSCTPVISLTSWPFSXPTDLVASTHXTKCRLSSALLL*TVNTSSRSTVATS-PSQETVA 181
++S P S TS P T T T+ SS + T T++ T +T PS T
Sbjct: 175 TTSTEPPSSSTS-PVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTP 233
Query: 182 TYWRTTTSIETSRC*SNFKTENP 250
TTT+ ET+ S + P
Sbjct: 234 VQTTTTTAPETTSTESPSSSTTP 256
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 5 SSSCTPVISLTSWPFSXPTDLVASTHXTKCRLSSALLL*TVNTSSRSTVAT-SPSQETVA 181
++S P S T+ P T T T+ SS + T T++ T +T SPS T
Sbjct: 198 TTSTEPPSSSTT-PVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTESPSSSTTP 256
Query: 182 TYWRTTTSIETS 217
TTT+ ET+
Sbjct: 257 VQTTTTTAPETT 268
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 5 SSSCTPVISLTSWPFSXPTDLVASTHXTKCRLSSALLL*TVNTSSRSTVATS-PSQETVA 181
++S P S T+ P T T T+ SS + T T++ T +T PS T
Sbjct: 290 TTSTEPPSSSTT-PVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTP 348
Query: 182 TYWRTTTSIETSR 220
TTT+ ET+R
Sbjct: 349 VQTTTTTAPETTR 361
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 5 SSSCTPVISLTSWPFSXPTDLVASTHXTKCRLSSALLL*TVNTSSRSTVATS-PSQETVA 181
++S P S T+ P T T T+ SS + T T++ T +T PS T
Sbjct: 221 TTSTEPPSSSTT-PVQTTTTTAPETTSTESPSSSTTPVQTTTTTAPETTSTEPPSSSTTP 279
Query: 182 TYWRTTTSIETS 217
TTT+ ET+
Sbjct: 280 VQTTTTTAPETT 291
Score = 27.9 bits (59), Expect = 8.5
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 5 SSSCTPVISLTSWPFSXPTDLVASTHXTKCRLSSALLL*TVNTSSRSTVAT-SPSQETVA 181
++S P S T+ P T T T+ SS + T T++ T +T SPS T
Sbjct: 474 TTSTEPPSSSTT-PVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTESPSSSTTP 532
Query: 182 TYWRTTTSIETS 217
TTT+ ET+
Sbjct: 533 VQTTTTTAPETT 544
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 5 SSSCTPVISLTSWPFSXPTDLVASTHXTKCRLSSALLL*TVNTSSRSTVATS-PSQETVA 181
++S P S T+ P T T T+ SS + T T++ T +T PS T
Sbjct: 497 TTSTEPPSSSTT-PVQTTTTTAPETTSTESPSSSTTPVQTTTTTAPETTSTEPPSSSTTP 555
Query: 182 TYWRTTTSIETS 217
TTT+ ET+
Sbjct: 556 VQTTTTTAPETT 567
>Z81052-5|CAB02876.1| 512|Caenorhabditis elegans Hypothetical
protein D2023.6 protein.
Length = 512
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/65 (26%), Positives = 37/65 (56%)
Frame = +1
Query: 220 LLIQLQNGKPKALILEDKSGAIIELKENGQAILNGASKGFPIIEKDVFAFRQPSNRIGVG 399
L+ L NGK + ++L+ G + + ++ + + + I++ D+ R+ ++++GVG
Sbjct: 322 LINSLGNGKYEIVLLDH--GLYLNISDHIRKLYSDL--WLAILKPDLQEIRKVASQMGVG 377
Query: 400 SLYGL 414
LYGL
Sbjct: 378 ELYGL 382
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 86 TKCRLSSALLL*TVNTSSRSTVATSPSQETVATYWRTTTSIETSRC*SNFKTENPRLLFW 265
T S+ L+ T ++S+ +T T+P T T TTT+ TS S T P
Sbjct: 449 TSTTTSATTLVPTTSSSTTTTTTTTPVPVTSTTTEPTTTTYTTSTSTSTTTTLPPTTSTP 508
Query: 266 KIRAELS 286
KI L+
Sbjct: 509 KIVVNLT 515
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,733,654
Number of Sequences: 27780
Number of extensions: 379042
Number of successful extensions: 1034
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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