Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1941
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146745-1|AAO12105.1|  153|Anopheles gambiae odorant-binding pr...    24   6.7  
AJ697725-1|CAG26918.1|  153|Anopheles gambiae putative odorant-b...    24   6.7  
AF437886-1|AAL84181.1|  153|Anopheles gambiae odorant binding pr...    24   6.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.9  

>AY146745-1|AAO12105.1|  153|Anopheles gambiae odorant-binding
           protein AgamOBP3 protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 650 WPTSTGVVAALVAFQCGV 597
           W +   V+AALV FQC +
Sbjct: 7   WSSRWRVLAALVIFQCAI 24


>AJ697725-1|CAG26918.1|  153|Anopheles gambiae putative
           odorant-binding protein OBPjj15 protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 650 WPTSTGVVAALVAFQCGV 597
           W +   V+AALV FQC +
Sbjct: 7   WSSRWRVLAALVIFQCAI 24


>AF437886-1|AAL84181.1|  153|Anopheles gambiae odorant binding
           protein protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 650 WPTSTGVVAALVAFQCGV 597
           W +   V+AALV FQC +
Sbjct: 7   WSSRWRVLAALVIFQCAI 24


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 467  NNYQTNREGFAKLFRKLSDDSWE 535
            NN+QT  +    LFR  + ++W+
Sbjct: 1346 NNFQTFPQAVLVLFRSATGEAWQ 1368


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 852,828
Number of Sequences: 2352
Number of extensions: 18085
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)