Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1939
(813 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D83783-1|BAA12112.1| 2124|Homo sapiens KIAA0192 protein. 30 8.7
AF132033-1|AAD44162.1| 2023|Homo sapiens OPA-containing protein ... 30 8.7
AF117755-1|AAD22033.1| 2212|Homo sapiens thyroid hormone recepto... 30 8.7
AF071309-1|AAC83163.1| 2023|Homo sapiens OPA-containing protein ... 30 8.7
AB102668-1|BAC81137.1| 2027|Homo sapiens TNRC11 protein. 30 8.7
AB102600-1|BAC81069.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102599-1|BAC81068.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102598-1|BAC81067.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102597-1|BAC81066.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102596-1|BAC81065.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102595-1|BAC81064.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102594-1|BAC81063.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102593-1|BAC81062.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102592-1|BAC81061.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102591-1|BAC81060.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102590-1|BAC81059.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102589-1|BAC81058.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102588-1|BAC81057.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102587-1|BAC81056.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102586-1|BAC81055.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102585-1|BAC81054.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102584-1|BAC81053.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102583-1|BAC81052.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102582-1|BAC81051.1| 276|Homo sapiens TNRC11 protein. 30 8.7
AB102581-1|BAC81050.1| 276|Homo sapiens TNRC11 protein. 30 8.7
>D83783-1|BAA12112.1| 2124|Homo sapiens KIAA0192 protein.
Length = 2124
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 315 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 351
>AF132033-1|AAD44162.1| 2023|Homo sapiens OPA-containing protein
protein.
Length = 2023
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 215 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 251
>AF117755-1|AAD22033.1| 2212|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP230
protein.
Length = 2212
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 403 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 439
>AF071309-1|AAC83163.1| 2023|Homo sapiens OPA-containing protein
protein.
Length = 2023
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 215 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 251
>AB102668-1|BAC81137.1| 2027|Homo sapiens TNRC11 protein.
Length = 2027
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 215 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 251
>AB102600-1|BAC81069.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102599-1|BAC81068.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102598-1|BAC81067.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102597-1|BAC81066.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102596-1|BAC81065.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102595-1|BAC81064.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102594-1|BAC81063.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102593-1|BAC81062.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102592-1|BAC81061.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102591-1|BAC81060.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102590-1|BAC81059.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102589-1|BAC81058.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102588-1|BAC81057.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102587-1|BAC81056.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102586-1|BAC81055.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102585-1|BAC81054.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102584-1|BAC81053.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102583-1|BAC81052.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102582-1|BAC81051.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
>AB102581-1|BAC81050.1| 276|Homo sapiens TNRC11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 226 TVLTCSSATAVMHCALLRSRVKAGRPVVHALSTVSPSLL 342
T+L C + V H +L SR+K G P+ H ++PS L
Sbjct: 105 TILLCCPSALVWHYSLTDSRIKTGSPLDHL--PIAPSNL 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,769,308
Number of Sequences: 237096
Number of extensions: 2260871
Number of successful extensions: 4236
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4236
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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