Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1939
         (813 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113533-1|AAM29538.1|  274|Drosophila melanogaster RE60872p pro...    30   3.3  
AE014134-3269|AAF53913.1|  274|Drosophila melanogaster CG2617-PA...    30   3.3  

>AY113533-1|AAM29538.1|  274|Drosophila melanogaster RE60872p
           protein.
          Length = 274

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 20/70 (28%), Positives = 35/70 (50%)
 Frame = -3

Query: 478 LTIDVAYGYRCGNTDASLVPSIEFXVYVSKREVSRSGRHVTPRVLTRGLG*LWIMRALPA 299
           +T+DVA  Y  G T   L   ++F   +S        R +   ++  G G LW++  LP 
Sbjct: 73  ITLDVA-DYFYGGTKGGLKNVLDFGHCIS--------RFICNLLIDLGDGILWLLMLLPR 123

Query: 298 SLLSLWNAIM 269
           ++L LW+ ++
Sbjct: 124 AILFLWDCLL 133


>AE014134-3269|AAF53913.1|  274|Drosophila melanogaster CG2617-PA
           protein.
          Length = 274

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 20/70 (28%), Positives = 35/70 (50%)
 Frame = -3

Query: 478 LTIDVAYGYRCGNTDASLVPSIEFXVYVSKREVSRSGRHVTPRVLTRGLG*LWIMRALPA 299
           +T+DVA  Y  G T   L   ++F   +S        R +   ++  G G LW++  LP 
Sbjct: 73  ITLDVA-DYFYGGTKGGLKNVLDFGHCIS--------RFICNLLIDLGDGILWLLMLLPR 123

Query: 298 SLLSLWNAIM 269
           ++L LW+ ++
Sbjct: 124 AILFLWDCLL 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,574,618
Number of Sequences: 53049
Number of extensions: 666367
Number of successful extensions: 1336
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)