Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1937
(800 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 334 2e-93
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 334 2e-93
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 334 2e-93
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 317 2e-88
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 24 6.3
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 24 6.3
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 24 6.3
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 334 bits (820), Expect = 2e-93
Identities = 155/158 (98%), Positives = 156/158 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCDE VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 488
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 489 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD G+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Score = 50.4 bits (115), Expect = 6e-08
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGYS TTT EREIVRDIKEKL YVA D
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALD 223
Score = 40.3 bits (90), Expect = 7e-05
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 158 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 334 bits (820), Expect = 2e-93
Identities = 155/158 (98%), Positives = 156/158 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCDE VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 488
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 489 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD G+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Score = 50.4 bits (115), Expect = 6e-08
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGYS TTT EREIVRDIKEKL YVA D
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALD 223
Score = 40.3 bits (90), Expect = 7e-05
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 158 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 334 bits (820), Expect = 2e-93
Identities = 155/158 (98%), Positives = 156/158 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCDE VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 488
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 489 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD G+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Score = 50.4 bits (115), Expect = 6e-08
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGYS TTT EREIVRDIKEKL YVA D
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALD 223
Score = 40.3 bits (90), Expect = 7e-05
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 158 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 317 bits (779), Expect = 2e-88
Identities = 144/158 (91%), Positives = 151/158 (95%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCD+ ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQ
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 488
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK+NREKM
Sbjct: 61 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKM 120
Query: 489 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
TQIMFETF PA+YVAIQAVLSLYASGRTTG+VLD G+
Sbjct: 121 TQIMFETFAAPAVYVAIQAVLSLYASGRTTGVVLDSGD 158
Score = 50.4 bits (115), Expect = 6e-08
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGYS TTT EREIVRDIKEKL YVA D
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALD 223
Score = 40.3 bits (90), Expect = 7e-05
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 158 DGVSHTVPIYEGYALPHAILRMDLAGRDLTDYLMKILT 195
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 23.8 bits (49), Expect = 6.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 499 CSKHSTRPPCTSPSKPCSRCTRPV 570
C+KH TR P P + C P+
Sbjct: 987 CNKHKTRVPHILPYESSRVCLTPI 1010
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 23.8 bits (49), Expect = 6.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 461 QPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRV 565
Q + QQ+EDD H + QH H + A +VRV
Sbjct: 641 QQEEQQQEDDHHHHQ--QHHHHHHAEVTTAGSVRV 673
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 23.8 bits (49), Expect = 6.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 236 GKAPPSGRDGRYGTEGL 286
G+ P GRDG +G GL
Sbjct: 344 GQPGPRGRDGNFGPVGL 360
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 879,121
Number of Sequences: 2352
Number of extensions: 19431
Number of successful extensions: 65
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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