Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1937
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 332 1e-91
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 332 2e-91
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 332 2e-91
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 332 2e-91
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 332 2e-91
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 332 2e-91
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 332 2e-91
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 331 4e-91
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 322 2e-88
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 296 1e-80
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 241 3e-64
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 201 4e-52
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 184 7e-47
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 184 7e-47
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 184 7e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 178 3e-45
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 159 2e-39
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 130 9e-31
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 97 2e-20
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 50 2e-06
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.10
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 32 0.42
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 2.2
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 2.2
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 6.8
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 6.8
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 6.8
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 6.8
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 332 bits (817), Expect = 1e-91
Identities = 154/158 (97%), Positives = 156/158 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 488
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 489 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD G+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGYS TTT EREIVRDIKEKL YVA D
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALD 223
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 332 bits (816), Expect = 2e-91
Identities = 153/158 (96%), Positives = 156/158 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 488
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 489 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLD G+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGYS TTT EREIVRDIKEKL YVA D
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALD 223
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 332 bits (816), Expect = 2e-91
Identities = 153/158 (96%), Positives = 156/158 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 488
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 489 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLD G+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGYS TTT EREIVRDIKEKL YVA D
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALD 223
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 332 bits (816), Expect = 2e-91
Identities = 153/158 (96%), Positives = 156/158 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 488
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 489 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLD G+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGYS TTT EREIVRDIKEKL YVA D
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALD 223
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 332 bits (816), Expect = 2e-91
Identities = 153/158 (96%), Positives = 156/158 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 488
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 489 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLD G+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGYS TTT EREIVRDIKEKL YVA D
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALD 223
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 332 bits (816), Expect = 2e-91
Identities = 153/158 (96%), Positives = 156/158 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 488
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 489 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLD G+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGYS TTT EREIVRDIKEKL YVA D
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALD 223
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 332 bits (816), Expect = 2e-91
Identities = 153/158 (96%), Positives = 156/158 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 488
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 489 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLD G+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGYS TTT EREIVRDIKEKL YVA D
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALD 223
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 331 bits (813), Expect = 4e-91
Identities = 152/158 (96%), Positives = 156/158 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCD+ VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 488
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 489 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD G+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGYS TTT EREIVRDIKEKL YVA D
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALD 223
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 322 bits (791), Expect = 2e-88
Identities = 148/156 (94%), Positives = 153/156 (98%)
Frame = +3
Query: 135 DEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 314
+E +AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 315 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 494
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 495 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
IMFETFNTPAMYV IQAVLSLYASGRTTGIVLD G+
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGD 157
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGY+ TTT EREIVRDIKEKL YVA D
Sbjct: 195 ERGYTFTTTAEREIVRDIKEKLCYVAHD 222
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 157 DGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILT 194
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 296 bits (726), Expect = 1e-80
Identities = 136/140 (97%), Positives = 139/140 (99%)
Frame = +3
Query: 183 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 362
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 363 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 542
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 543 AVLSLYASGRTTGIVLDXGE 602
AVLSLYASGRTTG+VLD G+
Sbjct: 125 AVLSLYASGRTTGVVLDSGD 144
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGYS TTT EREIVRDIKEKL YVA D
Sbjct: 182 ERGYSFTTTAEREIVRDIKEKLCYVALD 209
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 144 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 241 bits (591), Expect = 3e-64
Identities = 111/114 (97%), Positives = 113/114 (99%)
Frame = +3
Query: 261 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 440
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 441 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLD G+
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 114
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
ERGYS TTT EREIVRDIKEKL YVA D
Sbjct: 152 ERGYSFTTTAEREIVRDIKEKLCYVALD 179
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 601 NGVXHTVPIYEXYALPHAIXXXXXXXXXXXXXXMXILT 714
+GV HTVPIYE YALPHAI M ILT
Sbjct: 114 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 151
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 201 bits (491), Expect = 4e-52
Identities = 87/151 (57%), Positives = 118/151 (78%), Gaps = 1/151 (0%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 332
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 333 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 509
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 510 FNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
FN PA+Y+ +QAVLSLYA+GRTTG+VLD G+
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGD 161
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 184 bits (448), Expect = 7e-47
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKI 386
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 184 bits (448), Expect = 7e-47
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKI 386
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 184 bits (448), Expect = 7e-47
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKI 386
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 178 bits (434), Expect = 3e-45
Identities = 81/83 (97%), Positives = 82/83 (98%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 308
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDM 377
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 159 bits (387), Expect = 2e-39
Identities = 78/153 (50%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 326
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 327 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 503
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 504 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGE 602
E + ++YVA+QAVL+LYA G TG+V+D G+
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGD 161
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 716 ERGYSXTTTXEREIVRDIKEKLGYVAFD 799
+RGY+ + + E VR +KEKL Y+A+D
Sbjct: 199 QRGYNFNHSADFETVRQMKEKLCYIAYD 226
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 130 bits (315), Expect = 9e-31
Identities = 76/186 (40%), Positives = 102/186 (54%), Gaps = 24/186 (12%)
Frame = +3
Query: 129 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 272
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 273 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 449
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 450 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDXGE- 602
E PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+D G+
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDG 180
Query: 603 --RCLP 614
C+P
Sbjct: 181 VTHCIP 186
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 96.7 bits (230), Expect = 2e-20
Identities = 60/171 (35%), Positives = 90/171 (52%), Gaps = 17/171 (9%)
Frame = +3
Query: 138 EXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 311
+ V+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 312 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 446
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 447 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXG 599
+E+ N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++D G
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSG 179
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/123 (27%), Positives = 58/123 (47%)
Frame = +3
Query: 144 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 323
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 324 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 503
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 504 ETF 512
+ F
Sbjct: 116 DYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/123 (27%), Positives = 58/123 (47%)
Frame = +3
Query: 144 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 323
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 324 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 503
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 504 ETF 512
+ F
Sbjct: 116 DYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 43.6 bits (98), Expect = 2e-04
Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 326
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 327 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 506
+E + D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 507 TFNTPAMYVAIQAVLSLYASGRTTGIVLDXGER 605
+ + Q L LYA TTG+V+D GER
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGER 331
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 35.9 bits (79), Expect = 0.034
Identities = 29/83 (34%), Positives = 33/83 (39%)
Frame = +2
Query: 224 PLDRGKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLL 403
P G A P+G DG GT G + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 404 Q*AACRPRGTPSPAH*GSPQPQG 472
A P G P PA G+P P G
Sbjct: 246 APGAAGPPGPPGPA--GAPGPDG 266
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.10
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = +2
Query: 236 GKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 415
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 416 CRPRGTPSPAH*GSPQPQG 472
P G P PA G+P P G
Sbjct: 251 AGPPGPPGPA--GAPGPDG 267
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.3 bits (70), Expect = 0.42
Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = -2
Query: 457 GASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 278
GA S G SS S+ I + ++ T+ S PL++ +SS S
Sbjct: 424 GAPSSTLGSSSSTIVSTT------ITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSST 477
Query: 277 CPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATXSS 134
TITP +G+PT N S+P P + STT A + +S
Sbjct: 478 VVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 315 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 160
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 315 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 160
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 598 PXSSTIPVVRPDAYSESTAWMATYMAGVL 512
P SST+PVV P ++ T +Y+A L
Sbjct: 868 PLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 413 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 538
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 413 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 538
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 413 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 538
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 413 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 538
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 183 KAGFAGDDAPRAVFPSIVGRPRHQG 257
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,817,120
Number of Sequences: 27780
Number of extensions: 426318
Number of successful extensions: 1584
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1577
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -