Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1932
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M77235-1|AAA58644.1| 2016|Homo sapiens sodium channel alpha subu... 31 5.8
EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel prot... 31 5.8
EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel prot... 31 5.8
EF179185-1|ABN05288.1| 2015|Homo sapiens sodium channel, voltage... 31 5.8
DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein ... 31 5.8
AY148488-1|AAN61120.1| 2015|Homo sapiens cardiac sodium channel ... 31 5.8
AY038064-1|AAK74065.1| 2015|Homo sapiens voltage-gated sodium ch... 31 5.8
AF482988-1|AAO91669.1| 2015|Homo sapiens cardiac sodium channel ... 31 5.8
AB208866-1|BAD92103.1| 1576|Homo sapiens voltage-gated sodium ch... 31 5.8
AB158470-1|BAD12085.1| 1962|Homo sapiens TTX-resistant sodium ch... 31 5.8
AB158469-1|BAD12084.1| 2016|Homo sapiens TTX-resistant sodium ch... 31 5.8
>M77235-1|AAA58644.1| 2016|Homo sapiens sodium channel alpha subunit
protein.
Length = 2016
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 664 PFAPPKTSXIIALATPPSIHSNTH-TQTNVILVGTEYXH 551
P PP +S I + + PPS S T T N+ + G++Y H
Sbjct: 1959 PLGPPSSSSISSTSFPPSYDSVTRATSDNLQVRGSDYSH 1997
>EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel protein.
Length = 1998
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 664 PFAPPKTSXIIALATPPSIHSNTH-TQTNVILVGTEYXH 551
P PP +S I + + PPS S T T N+ + G++Y H
Sbjct: 1941 PLGPPSSSSISSTSFPPSYDSVTRATSDNLQVRGSDYSH 1979
>EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel protein.
Length = 2016
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 664 PFAPPKTSXIIALATPPSIHSNTH-TQTNVILVGTEYXH 551
P PP +S I + + PPS S T T N+ + G++Y H
Sbjct: 1959 PLGPPSSSSISSTSFPPSYDSVTRATSDNLQVRGSDYSH 1997
>EF179185-1|ABN05288.1| 2015|Homo sapiens sodium channel,
voltage-gated, type V, alpha (long QT syndrome 3)
protein.
Length = 2015
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 664 PFAPPKTSXIIALATPPSIHSNTH-TQTNVILVGTEYXH 551
P PP +S I + + PPS S T T N+ + G++Y H
Sbjct: 1958 PLGPPSSSSISSTSFPPSYDSVTRATSDNLQVRGSDYSH 1996
>DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein type
V alpha subunit protein.
Length = 2016
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 664 PFAPPKTSXIIALATPPSIHSNTH-TQTNVILVGTEYXH 551
P PP +S I + + PPS S T T N+ + G++Y H
Sbjct: 1959 PLGPPSSSSISSTSFPPSYDSVTRATSDNLQVRGSDYSH 1997
>AY148488-1|AAN61120.1| 2015|Homo sapiens cardiac sodium channel alpha
subunit Nav1.5 protein.
Length = 2015
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 664 PFAPPKTSXIIALATPPSIHSNTH-TQTNVILVGTEYXH 551
P PP +S I + + PPS S T T N+ + G++Y H
Sbjct: 1958 PLGPPSSSSISSTSFPPSYDSVTRATSDNLQVRGSDYSH 1996
>AY038064-1|AAK74065.1| 2015|Homo sapiens voltage-gated sodium channel
type V alpha subunit jejunal variant protein.
Length = 2015
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 664 PFAPPKTSXIIALATPPSIHSNTH-TQTNVILVGTEYXH 551
P PP +S I + + PPS S T T N+ + G++Y H
Sbjct: 1958 PLGPPSSSSISSTSFPPSYDSVTRATSDNLQVRGSDYSH 1996
>AF482988-1|AAO91669.1| 2015|Homo sapiens cardiac sodium channel alpha
subunit protein.
Length = 2015
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 664 PFAPPKTSXIIALATPPSIHSNTH-TQTNVILVGTEYXH 551
P PP +S I + + PPS S T T N+ + G++Y H
Sbjct: 1958 PLGPPSSSSISSTSFPPSYDSVTRATSDNLQVRGSDYSH 1996
>AB208866-1|BAD92103.1| 1576|Homo sapiens voltage-gated sodium channel
type V alpha isoform b variant protein.
Length = 1576
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 664 PFAPPKTSXIIALATPPSIHSNTH-TQTNVILVGTEYXH 551
P PP +S I + + PPS S T T N+ + G++Y H
Sbjct: 1519 PLGPPSSSSISSTSFPPSYDSVTRATSDNLQVRGSDYSH 1557
>AB158470-1|BAD12085.1| 1962|Homo sapiens TTX-resistant sodium channel
splicing variant protein.
Length = 1962
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 664 PFAPPKTSXIIALATPPSIHSNTH-TQTNVILVGTEYXH 551
P PP +S I + + PPS S T T N+ + G++Y H
Sbjct: 1905 PLGPPSSSSISSTSFPPSYDSVTRATSDNLQVRGSDYSH 1943
>AB158469-1|BAD12084.1| 2016|Homo sapiens TTX-resistant sodium channel
protein.
Length = 2016
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 664 PFAPPKTSXIIALATPPSIHSNTH-TQTNVILVGTEYXH 551
P PP +S I + + PPS S T T N+ + G++Y H
Sbjct: 1959 PLGPPSSSSISSTSFPPSYDSVTRATSDNLQVRGSDYSH 1997
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,933,590
Number of Sequences: 237096
Number of extensions: 1952984
Number of successful extensions: 3104
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3095
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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