Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1931
         (600 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88570-1|AAB53050.1| 3190|Drosophila melanogaster CREB-binding p...   122   3e-28
AE014298-1361|AAF46516.2| 3276|Drosophila melanogaster CG15319-P...   122   3e-28
AE014297-4357|AAF56879.1|  872|Drosophila melanogaster CG14514-P...    29   4.8  
DQ138800-1|ABA86406.1|  861|Drosophila melanogaster CG14514 prot...    29   6.4  
AY069837-1|AAL39982.1|  874|Drosophila melanogaster SD08060p pro...    29   6.4  

>U88570-1|AAB53050.1| 3190|Drosophila melanogaster CREB-binding
            protein homolog protein.
          Length = 3190

 Score =  122 bits (295), Expect = 3e-28
 Identities = 56/77 (72%), Positives = 62/77 (80%)
 Frame = -3

Query: 280  GAVTANPVSGTKEWHQSITADLRNHLVHKLVQAIFPTPDPSAMLDKRMHNLVAYARKVEG 101
            G  T  P    K+W +S+TADLRNHLVHKLVQAIFPT DP+ M DKRMHNLV+YA KVE 
Sbjct: 930  GGNTGPPGDNEKDWRESVTADLRNHLVHKLVQAIFPTSDPTTMQDKRMHNLVSYAEKVEK 989

Query: 100  DMYEMACTRSEYYHLLA 50
            DMYEMA +RSEYYHLLA
Sbjct: 990  DMYEMAKSRSEYYHLLA 1006


>AE014298-1361|AAF46516.2| 3276|Drosophila melanogaster CG15319-PB
            protein.
          Length = 3276

 Score =  122 bits (295), Expect = 3e-28
 Identities = 56/77 (72%), Positives = 62/77 (80%)
 Frame = -3

Query: 280  GAVTANPVSGTKEWHQSITADLRNHLVHKLVQAIFPTPDPSAMLDKRMHNLVAYARKVEG 101
            G  T  P    K+W +S+TADLRNHLVHKLVQAIFPT DP+ M DKRMHNLV+YA KVE 
Sbjct: 930  GGNTGPPGDNEKDWRESVTADLRNHLVHKLVQAIFPTSDPTTMQDKRMHNLVSYAEKVEK 989

Query: 100  DMYEMACTRSEYYHLLA 50
            DMYEMA +RSEYYHLLA
Sbjct: 990  DMYEMAKSRSEYYHLLA 1006


>AE014297-4357|AAF56879.1|  872|Drosophila melanogaster CG14514-PA
           protein.
          Length = 872

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 22  ALSEFYRFSQLASDNILIAYMPFHTCHPQPF*HKLLSCASVYRASPM-GLVSGISLEPVC 198
           +LSE +R   L + N+L+AY P HT   +     +  C ++   S +  + +GI+  PV 
Sbjct: 788 SLSELHRDVLLMAHNVLVAYKP-HTAQHKTARLFVQDCQAIKEFSQLPDVQAGITATPVS 846

Query: 199 GLG 207
             G
Sbjct: 847 NTG 849


>DQ138800-1|ABA86406.1|  861|Drosophila melanogaster CG14514
           protein.
          Length = 861

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 22  ALSEFYRFSQLASDNILIAYMPFHTCHPQPF*HKLLSCASVYRASPM-GLVSGISLEPVC 198
           +LSE +R   L + N+L+AY P HT   +     +  C ++   S +  + +GI+  PV 
Sbjct: 783 SLSELHRDVLLMAHNVLVAYKP-HTTQHKTARLFVQDCQAIKEFSQLPDVQAGITATPVS 841

Query: 199 GLG 207
             G
Sbjct: 842 NTG 844


>AY069837-1|AAL39982.1|  874|Drosophila melanogaster SD08060p
           protein.
          Length = 874

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 22  ALSEFYRFSQLASDNILIAYMPFHTCHPQPF*HKLLSCASVYRASPM-GLVSGISLEPVC 198
           +LSE +R   L + N+L+AY P HT   +     +  C ++   S +  + +GI+  PV 
Sbjct: 790 SLSELHRDVLLMAHNVLVAYKP-HTTQHKTARLFVQDCQAIKEFSQLPDVQAGITATPVS 848

Query: 199 GLG 207
             G
Sbjct: 849 NTG 851


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,207,217
Number of Sequences: 53049
Number of extensions: 440669
Number of successful extensions: 1178
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)