Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1930
         (460 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070896-1|AAL48518.1|  160|Drosophila melanogaster LP04958p pro...   198   3e-51
AE014298-2882|AAN09507.1|  160|Drosophila melanogaster CG14206-P...   198   3e-51
AE014298-2881|AAF48978.2|  160|Drosophila melanogaster CG14206-P...   198   3e-51
AE014297-4155|AAF56731.1|  163|Drosophila melanogaster CG12275-P...   178   3e-45
AF145693-1|AAD38668.2|  162|Drosophila melanogaster LD32148p pro...   176   1e-44
AY069546-1|AAL39691.1|  429|Drosophila melanogaster LD27370p pro...    28   6.9  
AE014296-2473|AAF49667.2|  429|Drosophila melanogaster CG6854-PA...    28   6.9  

>AY070896-1|AAL48518.1|  160|Drosophila melanogaster LP04958p
           protein.
          Length = 160

 Score =  198 bits (483), Expect = 3e-51
 Identities = 98/149 (65%), Positives = 109/149 (73%), Gaps = 1/149 (0%)
 Frame = +3

Query: 15  MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF 194
           M MPK +RVAIYEYLFKEGV+VAKKD+HA KH ELE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1   MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60

Query: 195 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGP-VGXXXXXXXXXXXX 371
           AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR  R+ETVR  P VG            
Sbjct: 61  AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120

Query: 372 XXXXXTPAAPGVAPHDKKADVGPGSXDLE 458
                   APG +  DKK DVGPG+ ++E
Sbjct: 121 EDRSAYRRAPGGSGVDKKGDVGPGAGEVE 149


>AE014298-2882|AAN09507.1|  160|Drosophila melanogaster CG14206-PC,
           isoform C protein.
          Length = 160

 Score =  198 bits (483), Expect = 3e-51
 Identities = 98/149 (65%), Positives = 109/149 (73%), Gaps = 1/149 (0%)
 Frame = +3

Query: 15  MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF 194
           M MPK +RVAIYEYLFKEGV+VAKKD+HA KH ELE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1   MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60

Query: 195 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGP-VGXXXXXXXXXXXX 371
           AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR  R+ETVR  P VG            
Sbjct: 61  AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120

Query: 372 XXXXXTPAAPGVAPHDKKADVGPGSXDLE 458
                   APG +  DKK DVGPG+ ++E
Sbjct: 121 EDRSAYRRAPGGSGVDKKGDVGPGAGEVE 149


>AE014298-2881|AAF48978.2|  160|Drosophila melanogaster CG14206-PB,
           isoform B protein.
          Length = 160

 Score =  198 bits (483), Expect = 3e-51
 Identities = 98/149 (65%), Positives = 109/149 (73%), Gaps = 1/149 (0%)
 Frame = +3

Query: 15  MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF 194
           M MPK +RVAIYEYLFKEGV+VAKKD+HA KH ELE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1   MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60

Query: 195 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGP-VGXXXXXXXXXXXX 371
           AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR  R+ETVR  P VG            
Sbjct: 61  AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120

Query: 372 XXXXXTPAAPGVAPHDKKADVGPGSXDLE 458
                   APG +  DKK DVGPG+ ++E
Sbjct: 121 EDRSAYRRAPGGSGVDKKGDVGPGAGEVE 149


>AE014297-4155|AAF56731.1|  163|Drosophila melanogaster CG12275-PA
           protein.
          Length = 163

 Score =  178 bits (434), Expect = 3e-45
 Identities = 90/150 (60%), Positives = 102/150 (68%), Gaps = 2/150 (1%)
 Frame = +3

Query: 15  MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF 194
           M +PK NRVAIYEYLFKEGV+VAKKD    KH+EL+KIPNLQVIK MQSL SRG+VKEQF
Sbjct: 1   MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQF 60

Query: 195 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETV--RRGPVGXXXXXXXXXXX 368
           AWRHFYW LTNEGIE LR +LHLPPEIVP+TL ++ R+  V  R GP G           
Sbjct: 61  AWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKT 120

Query: 369 XXXXXXTPAAPGVAPHDKKADVGPGSXDLE 458
                     PG    DKK DVG G+  +E
Sbjct: 121 DDDRSNYRRGPGAYGMDKKGDVGAGTGRVE 150


>AF145693-1|AAD38668.2|  162|Drosophila melanogaster LD32148p
           protein.
          Length = 162

 Score =  176 bits (429), Expect = 1e-44
 Identities = 89/148 (60%), Positives = 101/148 (68%), Gaps = 2/148 (1%)
 Frame = +3

Query: 21  MPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAW 200
           +PK NRVAIYEYLFKEGV+VAKKD    KH+EL+KIPNLQVIK MQSL SRG+VKEQFAW
Sbjct: 2   IPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAW 61

Query: 201 RHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETV--RRGPVGXXXXXXXXXXXXX 374
           RHFYW LTNEGIE LR +LHLPPEIVP+TL ++ R+  V  R GP G             
Sbjct: 62  RHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKTDD 121

Query: 375 XXXXTPAAPGVAPHDKKADVGPGSXDLE 458
                   PG    DKK DVG G+  +E
Sbjct: 122 DRSNYRRGPGAYGMDKKGDVGAGTGRVE 149


>AY069546-1|AAL39691.1|  429|Drosophila melanogaster LD27370p
           protein.
          Length = 429

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 403 PGAAGVRLYADLSSAERAGASGRPTGPRRTVS 308
           PG+A V   A  +SA    ++G P G +R+VS
Sbjct: 269 PGSAAVLAPATTTSASSVSSNGAPMGGKRSVS 300


>AE014296-2473|AAF49667.2|  429|Drosophila melanogaster CG6854-PA,
           isoform A protein.
          Length = 429

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 403 PGAAGVRLYADLSSAERAGASGRPTGPRRTVS 308
           PG+A V   A  +SA    ++G P G +R+VS
Sbjct: 269 PGSAAVLAPATTTSASSVSSNGAPMGGKRSVS 300


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,039,112
Number of Sequences: 53049
Number of extensions: 362453
Number of successful extensions: 1336
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)