Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1919
         (618 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens ...    26   2.8  
AK125389-1|BAC86153.1|  147|Homo sapiens protein ( Homo sapiens ...    25   6.3  
AB002110-1|BAB70694.1|  208|Homo sapiens Bradeion alpha protein.       25   7.9  
BC093825-1|AAH93825.1| 1037|Homo sapiens caspase recruitment dom...    29   9.9  
AF356193-1|AAK32718.1| 1037|Homo sapiens caspase recruitment dom...    29   9.9  

>AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45585 fis, clone BRTHA3013882. ).
          Length = 201

 Score = 25.8 bits (54), Expect(2) = 2.8
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 480 CVCVCVCLF 454
           CVCVC+C+F
Sbjct: 134 CVCVCICVF 142



 Score = 24.2 bits (50), Expect(2) = 2.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 507 VXYVFLIFDCVCVCVCL 457
           V   F +  CVC+CVC+
Sbjct: 121 VSVCFCVSVCVCLCVCV 137


>AK125389-1|BAC86153.1|  147|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43399 fis, clone OCBBF2009926. ).
          Length = 147

 Score = 24.6 bits (51), Expect(2) = 6.3
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 483 DCVCVCVCL 457
           +CVCVCVC+
Sbjct: 74  ECVCVCVCV 82



 Score = 24.2 bits (50), Expect(2) = 6.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 480 CVCVCVCLFHNYSNSHIFDYIK 415
           CVCVCVC+       H++   K
Sbjct: 81  CVCVCVCVRVGVVLGHLWPVTK 102


>AB002110-1|BAB70694.1|  208|Homo sapiens Bradeion alpha protein.
          Length = 208

 Score = 24.6 bits (51), Expect(2) = 7.9
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 483 DCVCVCVCL 457
           +CVCVCVC+
Sbjct: 142 ECVCVCVCV 150



 Score = 23.8 bits (49), Expect(2) = 7.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 480 CVCVCVCLFHNY 445
           CVC+CVC+   Y
Sbjct: 153 CVCLCVCVSGTY 164


>BC093825-1|AAH93825.1| 1037|Homo sapiens caspase recruitment domain
            family, member 6 protein.
          Length = 1037

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +1

Query: 16   SEPKPTSPARGAPCRSTNEALAETW---SQKNQKLSPQVRSTATLP 144
            S+P  T P+   PC+ST    ++ W   S+ +Q   PQ +S++T P
Sbjct: 977  SQPSQTKPS---PCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNP 1019


>AF356193-1|AAK32718.1| 1037|Homo sapiens caspase recruitment domain
            protein 6 protein.
          Length = 1037

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +1

Query: 16   SEPKPTSPARGAPCRSTNEALAETW---SQKNQKLSPQVRSTATLP 144
            S+P  T P+   PC+ST    ++ W   S+ +Q   PQ +S++T P
Sbjct: 977  SQPSQTKPS---PCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNP 1019


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,330,543
Number of Sequences: 237096
Number of extensions: 1162174
Number of successful extensions: 3737
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3703
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)