Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1916
(800 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 227 1e-60
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 115 9e-27
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 97 2e-21
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 69 8e-13
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 57 3e-09
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 54 2e-08
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 50 5e-07
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 36 0.005
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.19
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.44
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 1.3
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 28 1.8
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 27 3.1
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 27 3.1
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 27 4.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.1
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 5.4
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 5.4
SPBC1711.13 |his2||histidinol dehydrogenase His2 |Schizosaccharo... 26 7.2
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 7.2
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 7.2
SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit Cdc22|... 26 7.2
SPBP4G3.03 |||PI31 proteasome regulator related|Schizosaccharomy... 25 9.5
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 9.5
SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3 |Schizos... 25 9.5
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 227 bits (555), Expect = 1e-60
Identities = 112/179 (62%), Positives = 120/179 (67%)
Frame = +2
Query: 101 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 281 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRNTQSCSXXXXXXXXXXXXXXXX 460
RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAP
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121
Query: 461 XCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTXAXGVSHTVPIYEGYALPHAILRXDL 637
+ P + GV+HTVPIYEGYALPHAI+R DL
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDL 180
Score = 134 bits (324), Expect = 1e-32
Identities = 74/114 (64%), Positives = 81/114 (71%), Gaps = 1/114 (0%)
Frame = +1
Query: 388 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGX 567
PEEHP LLTEAPLNPK+NREKMTQI+FETFN PA YVAIQAVLSLYASGRTTGIVLD G
Sbjct: 98 PEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGD 157
Query: 568 RCLPHRAHLRRIRTXPRHSAXGLXPVATSQTT-SWKILTERGYSFTTTAEREIV 726
+ H + P H+ L T KIL ERGY+F+TTAEREIV
Sbjct: 158 G-VTHTVPIYEGYALP-HAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIV 209
Score = 31.5 bits (68), Expect = 0.14
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 642 GRDLTDYLMEDPHRARVLVHYHRRAGNRFVTS-RKKLXYXXLDFEQEMAXA 791
GRDLTDYLM+ + A V ++KL Y LDFEQE+ A
Sbjct: 182 GRDLTDYLMKILMERGYT--FSTTAEREIVRDIKEKLCYVALDFEQELQTA 230
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 115 bits (276), Expect = 9e-27
Identities = 59/174 (33%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 299 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPRNTQSCSXXXXXXXXXXXXXXXXXCSKH 475
+ PIE GI+ NW DME+IW + + + +L P +
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131
Query: 476 STRPPCTSPSKPCSRCTRPVVPPVSCWTXAXGVSHTVPIYEGYALPHAILRXDL 637
P + +P G++H+VPIY+G+++P AI + ++
Sbjct: 132 LNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEI 185
Score = 78.6 bits (185), Expect = 1e-15
Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
Frame = +1
Query: 388 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGX 567
PEEHP+LLTE PL N+EK+ + +ET N PA+ ++Q VL+LYAS RTTGIVL+ G
Sbjct: 103 PEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGD 162
Query: 568 RCLPHRAHLRRIRTXPRHSAXGLXPVATSQTTSWKILTER--GYSFTTTAEREIV 726
L H + + P SA + T + L R G+ ++AE+EIV
Sbjct: 163 G-LTHSVPIYDGFSIP--SAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIV 214
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 97.5 bits (232), Expect = 2e-21
Identities = 44/98 (44%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Frame = +2
Query: 107 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 280
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 281 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPR 394
R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ PR
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPR 99
Score = 79.4 bits (187), Expect = 5e-16
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Frame = +1
Query: 388 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGX 567
P +LLTE P+NP ANREKM + MFE + +YVAIQAVLSLYA G ++G+V+D G
Sbjct: 98 PRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGD 157
Query: 568 RCLPHRAHLRRIRTXPRHSAXGLXPVATSQTTSW--KILTERGYSFTTTAEREIV 726
+ H + + + G VA T + +L +GY+F TA+ E V
Sbjct: 158 G-VTHIVPV--YESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETV 209
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 68.9 bits (161), Expect = 8e-13
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +1
Query: 382 CRPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 531
C PE+H LLTE PLNP NRE +IMFE+FN +Y+A+QAVL+L AS
Sbjct: 119 CEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAAS 168
Score = 62.9 bits (146), Expect = 5e-11
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 24/117 (20%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 247
+++DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 248 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRN 397
D ++G++A K +L YPI HG + NWD ME+ W + + LR P +
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPED 123
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 56.8 bits (131), Expect = 3e-09
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 349 DLASY-LLQ*AACRPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 525
DL Y L Q P EHP+L+TE NP NR K + MFE+ PA Y+A Q + +
Sbjct: 82 DLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAF 141
Query: 526 ASGRTTGIVLDXG 564
ASG+ T ++D G
Sbjct: 142 ASGKGTACLVDIG 154
Score = 50.8 bits (116), Expect = 2e-07
Identities = 30/96 (31%), Positives = 49/96 (51%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
+EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 391
G + +K I +G V NWD +W + +L+ P
Sbjct: 62 G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNP 96
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 54.4 bits (125), Expect = 2e-08
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDR----KLSRTSTLVGNDTLIEVGSRSI 82
Query: 299 -KYPIEHGIVTNWDDMEKIWHHTF 367
+ P E +++NWD ME++ +TF
Sbjct: 83 ARSPFERNVISNWDLMEQVLDYTF 106
Score = 48.0 bits (109), Expect = 2e-06
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +1
Query: 394 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDXG 564
EHP+ +TE NP R MT+++FE +N P++ I + S Y + + ++GIVL+ G
Sbjct: 115 EHPICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLG 173
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 49.6 bits (113), Expect = 5e-07
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 284 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 391
I + +K +GI+ +W+ W +L+V P
Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNP 99
Score = 49.2 bits (112), Expect = 7e-07
Identities = 19/59 (32%), Positives = 38/59 (64%)
Frame = +1
Query: 388 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXG 564
P E+ +++TE NP++ R+++ + FE + PA Y+ QAV +A+ ++T +++D G
Sbjct: 99 PTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIG 157
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 36.3 bits (80), Expect = 0.005
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 397 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXG 564
+PV L +RE TQ FE P +A + ++ LYA G G+V+D G
Sbjct: 147 YPVCLVIPTYWSLYDRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIG 202
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 305 PIEHGIVTNWDDMEKIWHHTFYNELRVAPRNT 400
PI+ G V +W+ ++ W H Y+ L P +T
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDT 143
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.19
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 164 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 307
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.44
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -3
Query: 261 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 100
PT S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 272 VPHLLHKSPSVPYRPSRPDGGAFPRSRGTR 183
+ L+ K+PS PY SRP A S TR
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTR 335
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 623 LRXDLXRSRPHRLPHGRSSPSAGTRSLPPPSGKSFRDIKEKA 748
L+ L +P R P RSS + T S PP+ +S +KA
Sbjct: 142 LKHQLSSPQPSRAPIDRSSSNPVTSSQQPPNDRSTLSSSQKA 183
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 662 PHGRSSPSAGTRSLPPPSGKSFRDIK 739
PHG SSP T +L SGK D +
Sbjct: 347 PHGISSPKHSTNNLSSKSGKFHSDFR 372
>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 127
Score = 27.1 bits (57), Expect = 3.1
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = -2
Query: 301 FEGQDTSFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIVYY 122
F G +F CLI++IR +SH D EHG II C T L G I+YY
Sbjct: 47 FAGLGIAFIYCLIAFIRE-MSHPSSR-------KDTMEHGL-PIILCST-LMLVGNILYY 96
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 26.6 bits (56), Expect = 4.1
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
+V+DNG+ KAGFAG P+ + R + G + ++G+E + TL
Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57
Query: 299 KYPIEH--GIVTNWDDMEKIW 355
++ H G + +W +W
Sbjct: 58 QFRRAHEKGYLVHWSTETAVW 78
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -3
Query: 264 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 148
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 406 LLTEAPLNPKANREKMTQIMFETFN 480
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 5.4
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +2
Query: 530 PVVPPVSCWTXAXGVSHTVPIYEGYALPHAILRXDLXRSRPHRLPHGRSSPSAGTRSLP 706
PV P S A + TVP Y P+A + + H LP +S +AG P
Sbjct: 811 PVQPKTS---QASSILPTVPRTTSYTSPYATTSSHITPADVHPLPPPSTSTTAGWNDAP 866
>SPBC1711.13 |his2||histidinol dehydrogenase His2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 542 PVSCWTXAXGVSHTVPIYEGYALPHAILRXD 634
PVS A G +HT+P Y GYA ++ + D
Sbjct: 364 PVSMGDYASGTNHTLPTY-GYASSYSGVSTD 393
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 146 TYRSHCLLPTRQLLRRTS*ISEI 78
TYR H +PT LL T +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 301 FEGQDTSFALCLISYIRVLLSHTDHHA 221
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit
Cdc22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 25.8 bits (54), Expect = 7.2
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 239 GQKDSYVGDEAQSKRGILTLK-YPIEHGIVTNWDDM-EKIWHHTFYNELRVAPRNTQSCS 412
G +SY G A +GIL + + + +W ++ EKI H N L VAP T S S
Sbjct: 550 GTYESYEGSPAS--QGILQYDMWNVNPTDLWDWAELKEKIAKHGIRNSLLVAPMPTASTS 607
>SPBP4G3.03 |||PI31 proteasome regulator related|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 241
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 611 PHAILRXDLXRSRPHRLPHGRSSPSAGTRSLPPPSGKSF 727
PHA L DL PH LPH R++ P G F
Sbjct: 153 PHAFLAQDL----PHGLPHRRAALPCEALGFHPNVGDYF 187
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 674 SSPSAGTRSLPPPSGK 721
++PS RSLPPPSG+
Sbjct: 636 ATPSNPPRSLPPPSGQ 651
>SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 732
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 375 SCVSPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPS 509
S VS PS H G+P P G+Q + N+Q + + P+
Sbjct: 100 SLVSTPTAPSANHHGNPFPNGKQSIKAMPSLVNLQEDSVISKFPN 144
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,470,689
Number of Sequences: 5004
Number of extensions: 76570
Number of successful extensions: 258
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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