Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1911
(800 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 337 1e-93
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 326 2e-90
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 293 1e-80
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 289 3e-79
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 222 4e-59
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 127 2e-30
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 98 1e-21
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 72 8e-14
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.33
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 1.0
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 7.2
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 25 9.5
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 9.5
SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex al... 25 9.5
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 337 bits (828), Expect = 1e-93
Identities = 159/197 (80%), Positives = 176/197 (89%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 257
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 258 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 437
TIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 438 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 617
KM+ETAEAYLG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 618 DKXGTGERNVLIFDLAG 668
D+ GE NVLIFDL G
Sbjct: 184 DRSNQGESNVLIFDLGG 200
Score = 41.5 bits (93), Expect = 1e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 718 ESXAGDTHLGGEDFDNRMGQXFVXEFQ 798
++ AGDTHLGGEDFD+R+ F+ EF+
Sbjct: 218 KATAGDTHLGGEDFDSRLVNHFIQEFK 244
Score = 33.9 bits (74), Expect = 0.027
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 665 GGTFDVSILTIXDGIFE 715
GGTFDVS+LTI +GIFE
Sbjct: 200 GGTFDVSLLTIEEGIFE 216
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 326 bits (801), Expect = 2e-90
Identities = 154/197 (78%), Positives = 173/197 (87%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 257
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 258 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 437
TIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 438 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 617
KM+E+AEA+LG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 618 DKXGTGERNVLIFDLAG 668
D+ E NVLIFDL G
Sbjct: 184 DRSNQHETNVLIFDLGG 200
Score = 40.3 bits (90), Expect = 3e-04
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 718 ESXAGDTHLGGEDFDNRMGQXFVXEFQ 798
++ AGDTHLGGEDFD+R+ F EF+
Sbjct: 218 KATAGDTHLGGEDFDSRLVNHFAQEFK 244
Score = 33.9 bits (74), Expect = 0.027
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 665 GGTFDVSILTIXDGIFE 715
GGTFDVS+LTI +GIFE
Sbjct: 200 GGTFDVSLLTIEEGIFE 216
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 293 bits (720), Expect = 1e-80
Identities = 139/197 (70%), Positives = 161/197 (81%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 257
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 258 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 437
T+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+MVLT
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 438 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 617
KMKE +EA L K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGL 187
Query: 618 DKXGTGERNVLIFDLAG 668
D +NVLIFDL G
Sbjct: 188 DAKSDKPKNVLIFDLGG 204
Score = 41.5 bits (93), Expect = 1e-04
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1
Query: 727 AGDTHLGGEDFDNRMGQXFVXEFQ 798
AGDTHLGGEDFDN + + F+ EF+
Sbjct: 225 AGDTHLGGEDFDNALVEHFIQEFK 248
Score = 29.9 bits (64), Expect = 0.44
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2
Query: 665 GGTFDVSILTIXDGIFE 715
GGTFDVS+L I G+FE
Sbjct: 204 GGTFDVSLLKIQGGVFE 220
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 289 bits (709), Expect = 3e-79
Identities = 132/196 (67%), Positives = 167/196 (85%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 260
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 440
IFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 441 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
MK+TAEAYLGK V +AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLD
Sbjct: 158 MKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLD 217
Query: 621 KXGTGERNVLIFDLAG 668
K T E++++++DL G
Sbjct: 218 KTDT-EKHIVVYDLGG 232
Score = 35.1 bits (77), Expect = 0.012
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +1
Query: 727 AGDTHLGGEDFDNRM 771
+GDTHLGGEDFDNR+
Sbjct: 253 SGDTHLGGEDFDNRV 267
Score = 31.5 bits (68), Expect = 0.14
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +2
Query: 665 GGTFDVSILTIXDGIFE 715
GGTFDVS+L+I +G+FE
Sbjct: 232 GGTFDVSLLSIDNGVFE 248
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 222 bits (543), Expect = 4e-59
Identities = 109/201 (54%), Positives = 141/201 (70%), Gaps = 1/201 (0%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 245
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 246 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 425
NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGG 165
Query: 426 MVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 605
+L+KM+ETA YLGK V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+
Sbjct: 166 FILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAAL 225
Query: 606 AYGLDKXGTGERNVLIFDLAG 668
AYGLDK + V +FDL G
Sbjct: 226 AYGLDK--KNDAIVAVFDLGG 244
Score = 31.9 bits (69), Expect = 0.11
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 721 SXAGDTHLGGEDFDNRMGQXFVXEFQ 798
S GDTHLGGEDFD + + V F+
Sbjct: 263 STNGDTHLGGEDFDVALVRHIVETFK 288
Score = 30.3 bits (65), Expect = 0.33
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 665 GGTFDVSILTIXDGIFE 715
GGTFD+SIL + +G+FE
Sbjct: 244 GGTFDISILELNNGVFE 260
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 127 bits (307), Expect = 2e-30
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 1/187 (0%)
Frame = +3
Query: 66 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 245
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 246 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 422
N NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 423 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 602
+ TK+K AEA L +V + VI++PA+F D QR+A +A I+GLN LR++N+ AAA
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAA 182
Query: 603 IAYGLDK 623
+ YG+ K
Sbjct: 183 LTYGITK 189
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 98.3 bits (234), Expect = 1e-21
Identities = 53/182 (29%), Positives = 99/182 (54%), Gaps = 6/182 (3%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 260
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGED------KTFFPEEVS 422
+ + + L+G+ ++ T+ H+ V+ G+ K+ + ++ K E S
Sbjct: 87 VTNFRDLLGKSHDELTLHHC--HYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEAS 144
Query: 423 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 602
L ++ E+AE +LG V V++VP YF D+QR+A + A +GL VL++I++P A
Sbjct: 145 VRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVI 204
Query: 603 IA 608
+A
Sbjct: 205 LA 206
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 72.1 bits (169), Expect = 8e-14
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 4/210 (1%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 257
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 258 TIFDAKRLIGRK-FEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSSMV 431
+I + K L+ E VQ +P + + + +++ +++ + EE+ +M
Sbjct: 85 SIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEIIAMT 144
Query: 432 LTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 611
+ AE + + + V+TVP +FN+ QR +A I +VL +I++ A AI Y
Sbjct: 145 MEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEY 204
Query: 612 GLDK-XGTGERNVLIFDLAGXPSTCPSLPS 698
L + T +I+D +G ST ++ S
Sbjct: 205 SLSRSFSTDPTYNIIYD-SGSGSTSATVIS 233
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.33
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +3
Query: 186 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 365
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 366 KIKVAYKGEDKTFFPE 413
+K+ G + F +
Sbjct: 185 -LKLMIDGTVRNFIAQ 199
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 73 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 168
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -3
Query: 159 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 1
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 721 IPLEDXIXDGKDGHVEGXPARSKISTFRSPVPFLSR 614
I L+ D DGH+ A + TF P P LS+
Sbjct: 20 IELDGIKDDSFDGHLSITEATYDVDTFLKPSPALSK 55
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 59 QNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPG 238
+NGK T +R +S + W P++E R G D + V R + + +EP
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE----RSSNGNSDSASPPPVPRLSITRSQVSREP- 531
Query: 239 GDEPQQ 256
++P++
Sbjct: 532 -EKPEE 536
>SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex alpha
subunit Egd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 417 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 539
++ ++ K A LGK + FN+SQ+QAT+
Sbjct: 57 INEPIVYKSSNNAYIVLGKVTVEDMAAQARAFNESQKQATE 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,345,850
Number of Sequences: 5004
Number of extensions: 69355
Number of successful extensions: 211
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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