Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1908
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 370 e-103
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 365 e-101
SB_56| Best HMM Match : Actin (HMM E-Value=0) 364 e-101
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 363 e-101
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 341 5e-94
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 6e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 8e-46
SB_54| Best HMM Match : Actin (HMM E-Value=0) 144 5e-35
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 130 1e-30
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 107 7e-24
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 97 1e-20
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 56 2e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 54 9e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 54 1e-07
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 36 0.046
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.081
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 32 0.43
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.76
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 1.00
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 30 1.7
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 30 2.3
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 30 2.3
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_53411| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_6877| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 29 4.0
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 5.3
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 9.3
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 370 bits (911), Expect = e-103
Identities = 171/181 (94%), Positives = 176/181 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 444
S RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 445 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLD 624
TQIMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGD V+HTVPIY GYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 625 L 627
L
Sbjct: 181 L 181
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 216
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 365 bits (898), Expect = e-101
Identities = 169/181 (93%), Positives = 175/181 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 444
S RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 445 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLD 624
TQIMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGD V+HTVPIY GYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 625 L 627
L
Sbjct: 181 L 181
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 216
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 364 bits (896), Expect = e-101
Identities = 169/179 (94%), Positives = 174/179 (97%)
Frame = +1
Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSX 270
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 271 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQ 450
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 451 IMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLDL 627
IMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGD V+HTVPIY GYALPHAILRLDL
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 215
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 363 bits (893), Expect = e-101
Identities = 168/179 (93%), Positives = 174/179 (97%)
Frame = +1
Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSX 270
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 271 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQ 450
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 451 IMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLDL 627
IMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGD V+HTVPIY GYALPHAILRLDL
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 215
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 341 bits (837), Expect = 5e-94
Identities = 156/167 (93%), Positives = 162/167 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 444
S RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 445 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIY 585
TQIMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGD VSHTVPIY
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIY 167
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = +2
Query: 638 DLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
D + + I ERGYS TTT EREIVRDI+EK
Sbjct: 158 DGVSHTVPIYEERGYSFTTTAEREIVRDIKEK 189
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 188 bits (457), Expect = 6e-48
Identities = 87/178 (48%), Positives = 120/178 (67%), Gaps = 3/178 (1%)
Frame = +1
Query: 103 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSXRG 276
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 277 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREXMTQI 453
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NRE M ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 454 MFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLDL 627
MFE + +Y+AIQAVL+LYA G TG+V+DSGD V+H P+Y G+ALPH RLD+
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDI 184
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRD+T YL+K++ RGY+ T + E VR ++EK
Sbjct: 186 GRDITKYLIKLMLLRGYAFNHTADFETVRMMKEK 219
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 180 bits (439), Expect = 8e-46
Identities = 82/89 (92%), Positives = 85/89 (95%)
Frame = +1
Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSX 270
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 271 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 357
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 116 bits (279), Expect = 2e-26
Identities = 54/66 (81%), Positives = 60/66 (90%)
Frame = +1
Query: 430 NREXMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHA 609
N + M +IMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGD V+HTVPIY GYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 610 ILRLDL 627
I+RLDL
Sbjct: 138 IIRLDL 143
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 145 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 178
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 144 bits (350), Expect = 5e-35
Identities = 66/97 (68%), Positives = 77/97 (79%)
Frame = +1
Query: 337 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQIMFETFNTPAMYVAIQAVLSLY 516
K+W H F ++LRV E+ PVLLTEAPLNPK NRE M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 517 AXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLDL 627
A GRTTG V D GD VSHTVP+Y GY LPHA R+DL
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDL 2225
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 210
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIRE 730
GRDLT YL +++TERGYS +T E++I+RD++E
Sbjct: 2227 GRDLTHYLQRLVTERGYSFQSTAEQQIIRDLKE 2259
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 130 bits (314), Expect = 1e-30
Identities = 54/81 (66%), Positives = 71/81 (87%)
Frame = +1
Query: 385 EHPVLLTEAPLNPKANREXMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXV 564
+HPVLLTEAPLNP+ NRE ++ FETFN PA+++++QAVLSLYA GRTTG+VLD+GD V
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 565 SHTVPIYXGYALPHAILRLDL 627
SH+VPIY G+A+PH+I+R D+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDI 206
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREKA 736
GRD++ YL +L + G+ ++ E EIVR I+E++
Sbjct: 208 GRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEES 242
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 107 bits (258), Expect = 7e-24
Identities = 50/59 (84%), Positives = 53/59 (89%)
Frame = +1
Query: 451 IMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLDL 627
IMFE FN+PA+YVAIQAVLSLYA GRTTG+V DSGD VSH VPIY GYALPHAILRLDL
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDL 59
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMK++TERGYS TTT EREIVRDI+EK
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEK 94
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 97.1 bits (231), Expect = 1e-20
Identities = 42/111 (37%), Positives = 70/111 (63%)
Frame = +1
Query: 295 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQIMFETFNT 474
PI+ G++ +WD EKI + + ++ HP+L++EA N + RE +T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 475 PAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLDL 627
PA ++ +VL+ +A GR+ G+V+DSG + VP++ GY L AI+R L
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPL 113
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 210
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 56.4 bits (130), Expect = 2e-08
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
Frame = +1
Query: 97 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSXRG 276
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 277 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQ 450
L Y P + G + NWD ++IW +TF E + M +
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDE 323
Query: 451 IMFETFNTPAMYVAIQAVLSLY------AXGRTTGIVLDSGDXVSHTVPIYXGYALPHAI 612
I+FE +N A+ A LS Y +V+D+G +H VP++ G + A+
Sbjct: 324 ILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAV 383
Query: 613 LR 618
R
Sbjct: 384 RR 385
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 54.4 bits (125), Expect = 9e-08
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Frame = +1
Query: 79 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 249
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 250 GDEAQSXRGILTL 288
GD A + G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 496 QAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLDL 627
Q LSLYA G T G+ L SG + IY G+ L H + L++
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEI 810
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +1
Query: 223 GMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 402
G+ D ++GDEA T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 532 TGIVLDSGDXVSHTVPI 582
TG V+DSGD V+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +1
Query: 340 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQIMFETFNTPAMYVAIQAVLSLYA 519
I H F + L+V P +H V++T +E + +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 520 XGRTTGI----VLDSGDXVSHTVPIYXGYALP 603
+GI V D D + T Y LP
Sbjct: 572 YSAVSGIVEQRVTDGTDEIHSTDVNLAKYNLP 603
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 35.5 bits (78), Expect = 0.046
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 463 TFNTPAMYVAIQAVLSLYAXGRT-TGIVLDSGDXVSHTVPIYXGYALPHAILRLDL 627
++ T A+ + S RT TG V+DSGD V+H +P+ GY + I + +
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPI 93
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 34.7 bits (76), Expect = 0.081
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -1
Query: 207 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 91
MA + D G++ + SI+S E GLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = +2
Query: 479 PCTSPSKPC----SRCTRXVVPPVSCWTPATGSPTPC-----PSTRDTHSP 604
P T PC + CT+ +P +TP T TPC PST +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +2
Query: 479 PCTSPSKPCSR----CTRXVVPPVSCWTPATGSPTPC 577
PCT PC+ CT P +TP+T TPC
Sbjct: 632 PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +2
Query: 479 PCTSPSKPC----SRCTRXVVPPVSCWTPATGSPTPC 577
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 32.3 bits (70), Expect = 0.43
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 464 HSTRP-PCTSPSKPCSRCTRXVVPPVSCWTPATGSPTPC 577
H+T P P T PS P C + P C+T T SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 479 PCTSPSKPCSRCTRXVVPPVSCWTPATGSPTPC 577
PC SPS P + P C+T T SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.9 bits (69), Expect = 0.57
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 247 VGDEAQSXRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPL 417
VG++ S I L+ P + +VT+++ E++ H F + P HPV++TE
Sbjct: 117 VGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVC 176
Query: 418 NPKANRE 438
NP R+
Sbjct: 177 NPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 31.1 bits (67), Expect = 1.00
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 464 HSTRPPCTSPSKPCSRCTRXV-VPPVSCWTPATGSPTPCPSTRDTHSPTPS 613
HST ++PS P + CT P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCTPSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 427 ANREXMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIV 543
A +E + +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 476 PPCTSPSKPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPS 613
PP P P + TR VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Frame = +2
Query: 485 TSPSKPCSRCTRXVVPPVSCWTPATGS---------PTPCPSTRDTHSPTPSC-VWTWXG 634
T S+PC +CT V P + T A S PTP S R+ H +P WT G
Sbjct: 38 TGLSRPCQKCTVFVSTPDNSVTGAVASSVPSFGVELPTPRTSARNPHQRSPPLQAWTEKG 97
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 464 HSTRPPCTSP--SKPCSRCTRXVVPPVSCWTPATGSP-TPCPSTRDTHSPTP 610
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 390 PRPAY*GSPQPQGQ---QREXDPDHVRNIQHARHVRRHPSRALAVRVRSYHR 536
PR A +P+PQ + Q +PDHVR + V SR+ V R+Y R
Sbjct: 704 PRDATTHTPEPQQEPEVQSHMEPDHVRYMLERMSVNYPTSRSSFVDPRTYPR 755
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 476 PPCTSPSKPCSRCTRXVVPPVSCWTPATGSPT-PCPSTRDTHSPTPS 613
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 476 PPCTSPSKPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPS 613
P SP+ P P + TP T +PT T+ T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 467 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDTHSPT 607
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
>SB_53411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 556
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 506 SRCTRXVVPPVSCWTPATGSPTPCPSTRDTH 598
+R R V+ T G+P PCP++R TH
Sbjct: 153 ARAGRLVLSSRKVVTNRPGTPAPCPTSRQTH 183
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 476 PPCTSP-SKPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPS 613
P TSP + P +R + PP C P S++ + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGCAASPVPPTPPAISSKRSFSPSPS 362
>SB_6877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 29.1 bits (62), Expect = 4.0
Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Frame = +2
Query: 479 PCTSPSKPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPSCVWTWXGRDLTDYL- 655
P +P+ P S T PP+ P PTP + P + TW +T +L
Sbjct: 119 PAPTPTTPTSPATPARGPPIRTPIPLKEPPTPALESAPAAMPDATDT-TWNRLSVTYFLE 177
Query: 656 ---MKILTE--RGYSXTTTGEREIVRDIREKAXLRR 748
+ + + R E+ V D R KA LRR
Sbjct: 178 SEALHVAADYLRHVRLRANTEKRGVSDPRAKAALRR 213
>SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1741
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 682 VAALXEDLHEVVCEVTXGPSPDAGWRGGVRI 590
+ L + E+VCE T P P+ W G R+
Sbjct: 687 IIVLENNTVELVCETTGSPPPNITWTKGYRV 717
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 485 TSPSKPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPS 613
T+P+ P + T P + TP T + TP +P P+
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 467 STRPPCTSPSKPCSR---CTRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPS 613
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 464 HSTRPPCTSPSKPCSR---CTRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPS 613
++T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPT 118
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 467 STRPPCTSPSKPCSR---CTRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPS 613
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 53 TTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 533 PVSCWTPATG-SPTPCPSTRDTHSPTPSCVWTWXGRDLTDY 652
P + +TP T +PTP + +++PTPS T T Y
Sbjct: 64 PTTSYTPTTSYTPTPSYTPTTSYTPTPSYTSTTSYTPTTSY 104
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -3
Query: 259 PHLLHKSPSVPYRPSRPDGGAFPRSRETLREEHHLLRSRPCTYRSHCLLPTRQLLRR 89
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,359,135
Number of Sequences: 59808
Number of extensions: 606633
Number of successful extensions: 2183
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2156
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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