Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1903
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 189 2e-48
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 163 2e-40
U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protea... 81 3e-28
U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protea... 81 2e-27
U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protea... 116 1e-26
Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical pr... 113 2e-25
AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical ... 113 2e-25
U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protea... 112 2e-25
AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical... 111 4e-25
AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic prot... 111 4e-25
AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic prot... 111 4e-25
U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical pr... 111 7e-25
U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protea... 110 9e-25
AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical... 109 2e-24
AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical... 108 5e-24
AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic prot... 107 8e-24
AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical... 98 5e-21
AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical ... 93 2e-19
U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical pr... 87 2e-17
Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical pr... 54 6e-17
AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical ... 82 4e-16
AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical ... 73 3e-13
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical p... 29 3.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.5
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81063-2|CAB02959.1| 823|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z48178-4|CAA88202.1| 521|Caenorhabditis elegans Hypothetical pr... 28 6.2
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 6.2
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 28 8.1
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 28 8.1
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 28 8.1
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 28 8.1
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 28 8.1
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 28 8.1
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 8.1
AF025463-4|AAB71010.2| 344|Caenorhabditis elegans Serpentine re... 28 8.1
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 189 bits (461), Expect = 2e-48
Identities = 87/141 (61%), Positives = 107/141 (75%)
Frame = +1
Query: 160 DVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHN 339
+V G E L NY+DAQY+G ISIGTP Q+F V+FDTGSSNLW+PSKKC + +IAC+LH+
Sbjct: 77 NVEGEIDELLRNYMDAQYFGTISIGTPAQNFTVIFDTGSSNLWIPSKKCPFYDIACMLHH 136
Query: 340 KYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 519
+YDS+ S TY +G + AIQYG+GS+ GF+S D V V G+ Q FAEA SEPG+ FVA
Sbjct: 137 RYDSKSSSTYKEDGRKMAIQYGTGSMKGFISKDSVCVAGVCAEDQPFAEATSEPGITFVA 196
Query: 520 AKFDGILGMAFSTIAVDHVTP 582
AKFDGILGMA+ IAV V P
Sbjct: 197 AKFDGILGMAYPEIAVLGVQP 217
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 163 bits (395), Expect = 2e-40
Identities = 97/248 (39%), Positives = 136/248 (54%), Gaps = 13/248 (5%)
Frame = +1
Query: 31 LFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP------EPLS 192
+F L + + A+ R+ L + R + + G+ E L+ KY V G P E LS
Sbjct: 5 VFLLLALVALASAIQRIKLEKRTYTREQY-KFGSIQEHLKAKY-VPGYIPNKDAFNEGLS 62
Query: 193 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYV 372
+Y +AQYYG ++IGTPPQ+F+V+FDTGSSNLWVP C + +IAC +HN++D +KS +
Sbjct: 63 DYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCT 122
Query: 373 ANGTQFAIQYGSGSLSGFLSTDDVTVGG----LKVRRQTFAEAVSEPGLAFVAAKFDGIL 540
A G F IQYG+GS+ G + D V G + Q A A SEPG+ FVAAKFDGI
Sbjct: 123 ATGASFEIQYGTGSMKGTVDNDVVCFGHDTTYCTDKNQGLACATSEPGITFVAAKFDGIF 182
Query: 541 GMAFSTIAVDHVTPGVRQ-HGGSXTRAARLXV--LSXQGPRGDNXRRVAAGRXRPXHYEX 711
GM + TI+V+ ++ + Q S +L LS N + P HY
Sbjct: 183 GMGWDTISVNKISQPMDQIFANSAICKNQLFAFWLSRDANDITNGGEITLCETDPNHYVG 242
Query: 712 NLVXXPLL 735
N+ PL+
Sbjct: 243 NIAWEPLV 250
>U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protease
protein 2, isoforma protein.
Length = 635
Score = 80.6 bits (190), Expect(2) = 3e-28
Identities = 43/97 (44%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Frame = +1
Query: 307 HYTNIACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRR 471
+YT+ +C NK+D+ KS +Y NG F I+YG+GS GFL D +T GG L V
Sbjct: 344 NYTD-SCFYQNKFDASKSSSYKTNGRNFIIEYGTGSARGFLGQDTITFGGIGEPQLAVPN 402
Query: 472 QTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTP 582
F +A S F DGILG+AF +IAVD +TP
Sbjct: 403 TVFGQATSLAAF-FEGQPLDGILGLAFKSIAVDQITP 438
Score = 62.5 bits (145), Expect(2) = 3e-28
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Frame = +1
Query: 4 LKTTMGKISLFFL-ALIASSVMALYRVPLHRMKTARTHFHEVGT------ELELLRLKYD 162
+K G +LF L AL+A+++ A+ +VPL +++ R G + E+ R +
Sbjct: 201 IKIISGMQNLFLLLALVAAALAAVVQVPLVKIEPYRNRLIREGRWVQYRKDREIRRFMMN 260
Query: 163 VTGPSP---EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 306
+ +++Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 261 KQSNDMSVGQYVNDYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 311
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 346 DSRKSKTYVANGTQF--AIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 519
D +S Y A + A YGS S SG L D V+ GG+ + + V A
Sbjct: 21 DQLRSDAYAAGVDDYEHAGYYGSDSASGILGFDTVSFGGISESQLIVPDTV-----VATA 75
Query: 520 AKFDGILGMAFSTIAVDHVTP 582
DGI+G+ F + ++ P
Sbjct: 76 EDIDGIMGLGFLANSQQNIYP 96
>U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protease
protein 2, isoformb protein.
Length = 429
Score = 80.6 bits (190), Expect(2) = 2e-27
Identities = 43/97 (44%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Frame = +1
Query: 307 HYTNIACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRR 471
+YT+ +C NK+D+ KS +Y NG F I+YG+GS GFL D +T GG L V
Sbjct: 138 NYTD-SCFYQNKFDASKSSSYKTNGRNFIIEYGTGSARGFLGQDTITFGGIGEPQLAVPN 196
Query: 472 QTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTP 582
F +A S F DGILG+AF +IAVD +TP
Sbjct: 197 TVFGQATSLAAF-FEGQPLDGILGLAFKSIAVDQITP 232
Score = 60.1 bits (139), Expect(2) = 2e-27
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = +1
Query: 40 LALIASSVMALYRVPLHRMKTARTHFHEVGT------ELELLRLKYDVTGPSP---EPLS 192
LAL+A+++ A+ +VPL +++ R G + E+ R + + ++
Sbjct: 8 LALVAAALAAVVQVPLVKIEPYRNRLIREGRWVQYRKDREIRRFMMNKQSNDMSVGQYVN 67
Query: 193 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 306
+Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 68 DYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 105
>U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protease
protein.
Length = 388
Score = 116 bits (280), Expect = 1e-26
Identities = 73/190 (38%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Frame = +1
Query: 40 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 207
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 208 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYVANGTQ 387
Y G I++GTPPQ VV DTGSSNLWVP C + +C +Y S KS T+ ANG
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVPGPSC---DGSCKGKREYQSTKSSTFKANGKP 123
Query: 388 FAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 552
+ IQYGSG+ G+L D V G L V TF A + F GILG+AF
Sbjct: 124 WQIQYGSGNAKGYLGEDTVAFGAVTEKQLPVPSTTFGIA-THISSDFKNDAAGGILGLAF 182
Query: 553 STIAVDHVTP 582
+++AVDHV P
Sbjct: 183 TSLAVDHVVP 192
>Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 113 bits (271), Expect = 2e-25
Identities = 64/185 (34%), Positives = 97/185 (52%), Gaps = 4/185 (2%)
Frame = +1
Query: 40 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 219
L L+ + A+++VP + R G L + +PL + D G
Sbjct: 5 LLLVTTCSAAVFQVPTTTSGSFRAKLIREGKYSSFLASRLQQLNTGSQPLLGFSDDPCIG 64
Query: 220 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN----IACLLHNKYDSRKSKTYVANGTQ 387
I+IG+PPQS V DT S+NLWV C N + ++ +K+++ KS ++V + +
Sbjct: 65 NITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHKFNTTKSTSFVKSNRK 124
Query: 388 FAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAV 567
F IQYGSG SG+L TD V +GGLK+++Q F A + F DGI G+A+ ++V
Sbjct: 125 FNIQYGSGECSGYLGTDTVEIGGLKIQKQEFGVA-NIVDYDFGTRPIDGIFGLAWPALSV 183
Query: 568 DHVTP 582
D VTP
Sbjct: 184 DQVTP 188
Score = 82.2 bits (194), Expect = 4e-16
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Frame = +1
Query: 202 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN---IACLLHNKYDSRKSKTYV 372
D G I+IGTPPQS V DT S+N WV KC N + + +K+++ KS ++V
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFV 510
Query: 373 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 552
F+ +Y G +G+L TD V +GGL + +Q A + GL F + GI +A+
Sbjct: 511 EGNRTFSTEY--GLCTGYLGTDTVQMGGLTITKQELGIA-TIVGLGFGLKPYVGIFELAW 567
Query: 553 STIAVDHVTPGVRQ 594
++VD VTP +++
Sbjct: 568 PALSVDQVTPPMQK 581
>AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 113 bits (271), Expect = 2e-25
Identities = 64/185 (34%), Positives = 97/185 (52%), Gaps = 4/185 (2%)
Frame = +1
Query: 40 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 219
L L+ + A+++VP + R G L + +PL + D G
Sbjct: 5 LLLVTTCSAAVFQVPTTTSGSFRAKLIREGKYSSFLASRLQQLNTGSQPLLGFSDDPCIG 64
Query: 220 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN----IACLLHNKYDSRKSKTYVANGTQ 387
I+IG+PPQS V DT S+NLWV C N + ++ +K+++ KS ++V + +
Sbjct: 65 NITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHKFNTTKSTSFVKSNRK 124
Query: 388 FAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAV 567
F IQYGSG SG+L TD V +GGLK+++Q F A + F DGI G+A+ ++V
Sbjct: 125 FNIQYGSGECSGYLGTDTVEIGGLKIQKQEFGVA-NIVDYDFGTRPIDGIFGLAWPALSV 183
Query: 568 DHVTP 582
D VTP
Sbjct: 184 DQVTP 188
Score = 82.2 bits (194), Expect = 4e-16
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Frame = +1
Query: 202 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN---IACLLHNKYDSRKSKTYV 372
D G I+IGTPPQS V DT S+N WV KC N + + +K+++ KS ++V
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFV 510
Query: 373 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 552
F+ +Y G +G+L TD V +GGL + +Q A + GL F + GI +A+
Sbjct: 511 EGNRTFSTEY--GLCTGYLGTDTVQMGGLTITKQELGIA-TIVGLGFGLKPYVGIFELAW 567
Query: 553 STIAVDHVTPGVRQ 594
++VD VTP +++
Sbjct: 568 PALSVDQVTPPMQK 581
>U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protease
protein 5 protein.
Length = 393
Score = 112 bits (270), Expect = 2e-25
Identities = 63/141 (44%), Positives = 84/141 (59%), Gaps = 5/141 (3%)
Frame = +1
Query: 175 SPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSR 354
+P+ ++++ D +Y G I+IGTPPQ F VV DTGSSNLWVP C + +C +Y S
Sbjct: 61 APQNVNDFGDFEYLGNITIGTPPQPFLVVLDTGSSNLWVPGPSC---DGSCKGKREYQST 117
Query: 355 KSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVA 519
KS T+ ANG + IQYGSG+ G+L D V G L V TF A + F
Sbjct: 118 KSSTFKANGKPWQIQYGSGNAKGYLGEDTVAFGAVTEKQLPVPSTTFGIA-THISSDFKN 176
Query: 520 AKFDGILGMAFSTIAVDHVTP 582
+GILG+AF+++AVDHV P
Sbjct: 177 DAAEGILGLAFTSLAVDHVVP 197
>AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical
protein Y39B6A.20 protein.
Length = 396
Score = 111 bits (268), Expect = 4e-25
Identities = 68/190 (35%), Positives = 100/190 (52%), Gaps = 9/190 (4%)
Frame = +1
Query: 40 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 207
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 208 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 372
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 373 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 552
+F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+ +
Sbjct: 127 KETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGW 185
Query: 553 STIAVDHVTP 582
+AVD V P
Sbjct: 186 PALAVDQVVP 195
>AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 111 bits (268), Expect = 4e-25
Identities = 68/190 (35%), Positives = 100/190 (52%), Gaps = 9/190 (4%)
Frame = +1
Query: 40 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 207
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 208 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 372
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 373 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 552
+F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+ +
Sbjct: 127 KETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGW 185
Query: 553 STIAVDHVTP 582
+AVD V P
Sbjct: 186 PALAVDQVVP 195
>AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 111 bits (268), Expect = 4e-25
Identities = 68/190 (35%), Positives = 100/190 (52%), Gaps = 9/190 (4%)
Frame = +1
Query: 40 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 207
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 208 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 372
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 373 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 552
+F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+ +
Sbjct: 127 KETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGW 185
Query: 553 STIAVDHVTP 582
+AVD V P
Sbjct: 186 PALAVDQVVP 195
>U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical
protein F21F8.4 protein.
Length = 395
Score = 111 bits (266), Expect = 7e-25
Identities = 64/145 (44%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
Frame = +1
Query: 163 VTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNK 342
V +P+ ++++ D +Y G I+IGTPPQ F VV DTGS+NLWVP C T C ++
Sbjct: 57 VFASAPQNVNDFGDVEYLGNITIGTPPQQFIVVLDTGSANLWVPGSNCDGT---CKGKSE 113
Query: 343 YDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGL 507
+DS KS T+ NG + IQY SGS G + D V GG L V TF A S
Sbjct: 114 FDSSKSTTFKKNGQSWQIQYESGSAKGIMGVDTVAFGGASEQQLLVPSTTFGIA-SHISS 172
Query: 508 AFVAAKFDGILGMAFSTIAVDHVTP 582
F +GILG+AF+++AVD VTP
Sbjct: 173 NFKNDAAEGILGLAFTSLAVDGVTP 197
>U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protease
protein 6 protein.
Length = 389
Score = 110 bits (265), Expect = 9e-25
Identities = 64/140 (45%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Frame = +1
Query: 178 PEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRK 357
P+ ++++ D +Y G I+IGTP Q F VV DTGSSNLW+P C TN C +K+DS
Sbjct: 60 PQNVNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTCK-TN--CKTKSKFDSTA 116
Query: 358 SKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAA 522
S T+V NG + IQYGSG +G L D V G L V TF A S+ F
Sbjct: 117 SSTFVKNGKSWTIQYGSGDAAGILGQDTVRFGAKGDSQLSVPTTTFGIA-SKISADFKND 175
Query: 523 KFDGILGMAFSTIAVDHVTP 582
DGILG+AF+++AVD V P
Sbjct: 176 ATDGILGLAFTSLAVDGVVP 195
>AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical
protein Y39B6A.24 protein.
Length = 391
Score = 109 bits (262), Expect = 2e-24
Identities = 68/198 (34%), Positives = 102/198 (51%), Gaps = 9/198 (4%)
Frame = +1
Query: 16 MGKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVT-GPSPEPLS 192
M I L FLA S+ A++++P + R G E L ++ +P+S
Sbjct: 1 MHLIFLLFLAPFCSA--AVFQLPTKSTGSLRAKLIRAGKYQEFLITQHAARLNTISQPIS 58
Query: 193 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC-------LLHNKYDS 351
+Y D Y G ++GTPPQ +V DTGS+N+WV C N+ C K+D+
Sbjct: 59 DYSDEVYLGNFTVGTPPQPVSLVLDTGSANMWVIDASCD--NMFCNGWIGSNYTRQKFDT 116
Query: 352 RKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTV-GGLKVRRQTFAEAVSEPGLAFVAAKF 528
KS ++ +F+IQYG G SG+L TD V + GGL +R+Q A ++ + F
Sbjct: 117 SKSSSFSRENRKFSIQYGKGLCSGYLGTDTVGLGGGLTIRKQELGIA-NKLDVDFAVQPM 175
Query: 529 DGILGMAFSTIAVDHVTP 582
DGI G+A+ +AVD +TP
Sbjct: 176 DGIFGLAWPALAVDQITP 193
>AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical
protein Y39B6A.23 protein.
Length = 395
Score = 108 bits (259), Expect = 5e-24
Identities = 66/193 (34%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Frame = +1
Query: 31 LFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVT----GPSPEPLSNY 198
+F L L+ A+ ++P + R + G E L ++ +PL +Y
Sbjct: 4 VFLLFLVPFCSAAVLQLPTKSTGSLRAKLIQAGKYQEFLASQHAARLQQLNTGSQPLIDY 63
Query: 199 LDAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSK 363
D Y I++GTPPQ VV DT S+NLWV S+ C+ + K++ KS
Sbjct: 64 YDDMYLANITVGTPPQPASVVLDTASANLWVIDAACNSQACNGNPGSGYTKQKFNPNKSS 123
Query: 364 TYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILG 543
T+V +F+IQYGSG+ SG+L TD + +GGL V+ Q F A + G + DGI G
Sbjct: 124 TFVKGTRRFSIQYGSGTSSGYLGTDVLQLGGLTVKAQEFGVA-TNLGSVLGSEPMDGIFG 182
Query: 544 MAFSTIAVDHVTP 582
+ + I+VD VTP
Sbjct: 183 LGWPAISVDQVTP 195
>AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic
protease protein.
Length = 395
Score = 107 bits (257), Expect = 8e-24
Identities = 66/192 (34%), Positives = 100/192 (52%), Gaps = 9/192 (4%)
Frame = +1
Query: 34 FFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYL 201
F L+ + + A+ +VP H+ ++ R + G L ++ +P +Y
Sbjct: 4 FVLSPLWACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYF 63
Query: 202 DAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKT 366
D Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T
Sbjct: 64 DDFYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTT 123
Query: 367 YVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGM 546
+V +F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+
Sbjct: 124 FVKETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGL 182
Query: 547 AFSTIAVDHVTP 582
++ +AVD V P
Sbjct: 183 GWTALAVDQVVP 194
>AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical
protein Y39B6A.22 protein.
Length = 390
Score = 98.3 bits (234), Expect = 5e-21
Identities = 68/197 (34%), Positives = 101/197 (51%), Gaps = 8/197 (4%)
Frame = +1
Query: 16 MGKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKY-DVTGPSPEPLS 192
M I L F+A S+ A+ ++P + R + G E L ++ PL+
Sbjct: 1 MHLIFLLFIATFCSA--AVLQLPTKSTGSLRAKLIQSGKYPEFLASQHVSRLNSGALPLA 58
Query: 193 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC-----LLHN--KYDS 351
+Y+D Y I++GTPPQS VV TGS+N WV C T+ AC H K+ S
Sbjct: 59 DYMDEIYTANITVGTPPQSASVVMGTGSANFWVVGAGC--TSPACNGFPDSGHTKLKFYS 116
Query: 352 RKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFD 531
KS ++V +F I Y +G+ SG+L TD + +GGL V+ Q FA ++ D
Sbjct: 117 NKSSSFVDLNRKFFINYPTGACSGYLGTDVLQLGGLTVKNQEFA-VTTQISDQMGHFPLD 175
Query: 532 GILGMAFSTIAVDHVTP 582
G+LG+A+ +AVD +TP
Sbjct: 176 GVLGLAWPPVAVDQITP 192
>AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical
protein C11D2.2 protein.
Length = 394
Score = 93.1 bits (221), Expect = 2e-19
Identities = 54/152 (35%), Positives = 81/152 (53%), Gaps = 9/152 (5%)
Frame = +1
Query: 154 KYDVTGPSPEPLSNYLDAQYYGVISIGTP-----PQSFKVVFDTGSSNLWVPSKKCHYTN 318
K+ + + ++++ D Y+G I++GTP Q+F VV DTGSSN+WVP C +
Sbjct: 47 KHTIHKGQHQHVADFRDFAYFGNITLGTPIESTAEQTFLVVLDTGSSNVWVPDNSCGIDD 106
Query: 319 --IACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG--LKVRRQTFAE 486
AC KY S +Y +GT F+I YG+GS SG+ D + L ++ Q F +
Sbjct: 107 KKSACTYKKKYFGTDSSSYEKDGTPFSISYGTGSASGYFGKDTLCFSDTTLCIKSQIFGQ 166
Query: 487 AVSEPGLAFVAAKFDGILGMAFSTIAVDHVTP 582
A + F + DGILG+ F+ +AV V P
Sbjct: 167 A-NNIAPFFANQEIDGILGLGFTDLAVHSVPP 197
>U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical
protein F28A12.4 protein.
Length = 389
Score = 86.6 bits (205), Expect = 2e-17
Identities = 48/138 (34%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Frame = +1
Query: 190 SNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTY 369
++Y+ +Y G I++GTP Q+F VV DTGS+NL +P C C ++ + S TY
Sbjct: 65 TDYVYYEYMGNITVGTPDQNFIVVLDTGSANLLIPGTNC---TTYCEKKRLFNEKASSTY 121
Query: 370 VANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDG 534
+A + I+Y SG G L D V +GG L + R ++ G F + +G
Sbjct: 122 IATNRPWQIKYASGDAYGTLGIDTVKIGGSGEAQLAIPR-SYLGVADTVGSDFKWSPKEG 180
Query: 535 ILGMAFSTIAVDHVTPGV 588
I G+AF+ +AVD++TP +
Sbjct: 181 IFGLAFTALAVDNITPPI 198
>Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical
protein C15C8.3 protein.
Length = 428
Score = 53.6 bits (123), Expect(2) = 6e-17
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Frame = +1
Query: 313 TNIACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKV--RRQTFAE 486
T AC ++++S S +YV NG +F + Y +G + GF D V Q F +
Sbjct: 144 TTDACQSKHRFNSSLSSSYVTNGQKFDMTYNTGEVKGFFGVDTFCFTNTSVCATGQVFGQ 203
Query: 487 AVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPGV--RQHGGSXTRAARLXVLSXQGPRGD 660
A + G AF DGI+G+ + +AV+ TP + + G + + L+ GP
Sbjct: 204 ATT-IGEAFAKQPEDGIIGLGWPALAVNQQTPPLFNLMNQGKLDQPYFVVYLANIGPTSQ 262
Query: 661 -NXRRVAAGRXRPXHYEXNLVXXPL 732
N G H N+ PL
Sbjct: 263 INGGAFTVGGLDTTHCSSNVDWVPL 287
Score = 51.6 bits (118), Expect(2) = 6e-17
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 73 YRVPLHRMKTARTHFHEVGTEL-ELLRLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQS 249
YR + + A+ E E ELL K S P+ +Y D Y IS+G+P Q+
Sbjct: 25 YRPNMRQRMNAKGKLAEYEKERNELLSKKSLQLASSSSPVIDYEDMAYMVQISLGSPAQN 84
Query: 250 FKVVFDTGSSNLWVPSKKC 306
F + D+GSSNLWVP C
Sbjct: 85 FVLFIDSGSSNLWVPDITC 103
>AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical
protein F59D6.2 protein.
Length = 380
Score = 82.2 bits (194), Expect = 4e-16
Identities = 53/177 (29%), Positives = 83/177 (46%)
Frame = +1
Query: 40 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 219
LAL+ + + L + R G EL RL+ TG E + ++ D Y
Sbjct: 9 LALLVFCSAGQFSISLEKSVPLREQLIREGRELA--RLQQLSTGN--ESIYDHFDEYYTV 64
Query: 220 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYVANGTQFAIQ 399
+ IGTP Q F+V DT SSNLWV +C + +Y+ S T++A + F +
Sbjct: 65 SVRIGTPAQHFEVALDTTSSNLWVFGVECKSQSCQGHRIREYNRTASSTFIAGTSNFVLP 124
Query: 400 YGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVD 570
+ G +SG L D++ G K++ Q F L+ V FDG+LG+ + A++
Sbjct: 125 FNDGDVSGDLGKDNIQFAGSKIQNQDFGIGTDATRLSGVT--FDGVLGLGWPATALN 179
>AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical
protein F59D6.3 protein.
Length = 474
Score = 72.5 bits (170), Expect = 3e-13
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 4/188 (2%)
Frame = +1
Query: 19 GKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTE-LELLRLKYDVTGPSPEPLSN 195
GK+ + L L+A + + + + + R G EL R++ TG +
Sbjct: 91 GKL-ISLLGLVALCSAGQFSISVEKSGSLREQLIREGRYGQELARIQQLSTGNVS--FFD 147
Query: 196 YLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNI---ACLLHNKYDSRKSKT 366
+ D Y + IGTP Q F+V FDT SSNLWV +C N +Y+ S T
Sbjct: 148 HFDEYYTAGVRIGTPAQHFQVAFDTTSSNLWVFGVECRSQNCHGGRGRRDREYNRTASST 207
Query: 367 YVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGM 546
+VA + F + Y G +SG + D G ++ Q F + FDG+LG+
Sbjct: 208 FVAGTSSFNLPYDGGHVSGNVGKDTAQFAGFTIQSQDF--GIGTAATRLFGETFDGVLGL 265
Query: 547 AFSTIAVD 570
+ A++
Sbjct: 266 GWPATALN 273
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -3
Query: 415 GCRSRTVSRTGCHSRRTSWTCGCRTCCAANKRCWCS 308
GC GC R C CR CC + C C+
Sbjct: 74 GCGGGGGGGCGCCCCRPKCCCCCRRCCTCCRTCCCT 109
>Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical
protein T21B4.1 protein.
Length = 306
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 395 IANWVPFATYVLDLRLSYLLCSKQ 324
+ NW F T L +++SYLLC+K+
Sbjct: 243 LQNWSNFGTTPLIIQISYLLCNKR 266
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 295 KAPRGWRIRCRIPP*TTAAACRY*SLRSTEHQDNLTMVRVKG-QSHRILISTAP 137
KAP R ++PP T AAA R S+ +T +R G +S + ++T P
Sbjct: 717 KAPSTVTTRSKVPPPTAAAAVRIVSVTTTTTPTKTAELRKPGARSPKTTVATVP 770
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 385 GCHSRRTSWTCGCRTCCAANKRCWCS 308
GC R C CR CC + C C+
Sbjct: 85 GCCCCRPRCCCCCRRCCTCCRTCCCT 110
>Z81063-2|CAB02959.1| 823|Caenorhabditis elegans Hypothetical
protein F15D3.4 protein.
Length = 823
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 400 YGSGSLSGFLSTDDVTVGGLKVRRQTF 480
Y GSL GFL DDV L +RQ F
Sbjct: 53 YPDGSLEGFLDIDDVQKKKLDEQRQEF 79
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 385 GCHSRRTSWTCGCRTCCAANKRCWCS 308
GC R C CR CC + C C+
Sbjct: 83 GCCCCRPRCCCCCRRCCTCCRTCCCT 108
>Z48178-4|CAA88202.1| 521|Caenorhabditis elegans Hypothetical
protein C05C10.3 protein.
Length = 521
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +1
Query: 232 GTPPQSFKVVFDTGSSNLWVPSKKCHYTN--IACLLHNKYDSRKSKTYVANGTQFAIQYG 405
G P + + TG L S N + LL + + +YV +FA QY
Sbjct: 65 GIPENLIQAITKTGQKGLTCVSNNAGVDNWGLGLLLQTRQIKKMISSYVGENGEFARQYL 124
Query: 406 SGSL 417
SG L
Sbjct: 125 SGEL 128
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 385 GCHSRRTSWTCGCRTCCAANKRCWCS 308
GC R C CR CC + C C+
Sbjct: 84 GCCCCRPRCCCCCRRCCTCCRTCCCT 109
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 385 GCHSRRTSWTCGCRTCCAANKRCWCS 308
GC R C CR CC + C C+
Sbjct: 85 GCCCCRPRCCCCCRRCCTCCRTCCCT 110
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 364 SWTCGCRTCCAANKRCWCSGTF 299
S CG CA NKRC C T+
Sbjct: 29 STDCGTGNYCAGNKRCACLTTY 50
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 542 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 411
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 2 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 43
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 542 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 411
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 4 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 45
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 542 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 411
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 1 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 42
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 542 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 411
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 39 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 80
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 542 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 411
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 113 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 154
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -3
Query: 412 CRSRTVSRTGCHSRRTSWTCGC-RTCCAANKRCWCS 308
C S+ RT C S + CGC R CC C+
Sbjct: 159 CGSQPYGRTPCRSGCPNGDCGCGRPCCYYQNPTCCN 194
>AF025463-4|AAB71010.2| 344|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 3 protein.
Length = 344
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = -3
Query: 334 AANKRCWCSGTFWKAPRGWRIRCRIPP*TTAAACRY*SLRSTEHQDNLTMVRVKGQSHRI 155
A N CW + TF A I C P R+ +L+S + + +TM SH+
Sbjct: 192 AGNMSCWSAATF-SAIVYMTIPC-FPIYGVIVFFRHKTLKSLDGRGRITMSETTRSSHKQ 249
Query: 154 LISTAPVQ 131
LI +Q
Sbjct: 250 LIKALTIQ 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,039,017
Number of Sequences: 27780
Number of extensions: 345380
Number of successful extensions: 1175
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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