Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1896
         (800 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p pro...    29   7.4  
AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p pro...    29   7.4  
AE014298-2516|AAF48692.1| 1430|Drosophila melanogaster CG8945-PC...    29   7.4  
AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-P...    29   7.4  

>BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p
           protein.
          Length = 1455

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +3

Query: 12  PSEPKPTSPARGAPCRPT-NEALARRGRHGTTV 107
           PSEP P    RG P  P  ++A+   GRH   V
Sbjct: 207 PSEPSPVKRRRGRPPGPAKSQAMTTDGRHACEV 239


>AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p
           protein.
          Length = 1454

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +3

Query: 12  PSEPKPTSPARGAPCRPT-NEALARRGRHGTTV 107
           PSEP P    RG P  P  ++A+   GRH   V
Sbjct: 206 PSEPSPVKRRRGRPPGPAKSQAMTTDGRHACEV 238


>AE014298-2516|AAF48692.1| 1430|Drosophila melanogaster CG8945-PC
            protein.
          Length = 1430

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = -3

Query: 615  VFDVSSIKSYTFNL-NLTYSYELSNESPHQNPRLSWNRTHNNETV*KY 475
            +FDV    +Y     +   +   S   P   P ++WNR HN++ + KY
Sbjct: 1051 IFDVGKAIAYELTKEDYLQTTRPSKPRPTAPPPMTWNRYHNHDEIVKY 1098


>AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-PA
           protein.
          Length = 1266

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +3

Query: 12  PSEPKPTSPARGAPCRPT-NEALARRGRHGTTV 107
           PSEP P    RG P  P  ++A+   GRH   V
Sbjct: 178 PSEPSPVKRRRGRPPGPAKSQAMTTDGRHACEV 210


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,655,481
Number of Sequences: 53049
Number of extensions: 569298
Number of successful extensions: 1419
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)