Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1894
         (800 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X87176-1|CAA60643.1|  736|Homo sapiens 17beta-hydroxysteroid deh...   169   1e-41
BC003098-1|AAH03098.1|  736|Homo sapiens hydroxysteroid (17-beta...   169   1e-41
AF057740-1|AAD08652.1|  736|Homo sapiens 17-beta-hydroxysteroid ...   169   1e-41
AB208932-1|BAD92169.1|  471|Homo sapiens hydroxysteroid (17-beta...   169   1e-41

>X87176-1|CAA60643.1|  736|Homo sapiens 17beta-hydroxysteroid
           dehydrogenase protein.
          Length = 736

 Score =  169 bits (410), Expect = 1e-41
 Identities = 81/157 (51%), Positives = 98/157 (62%)
 Frame = +2

Query: 110 VXDVLDKGXSAVAIXNSEIFQNKQLVCRTHQHIFVLGQGGFGGPRNXKNAIGXANAPKRN 289
           V DVLDKG   V I +   +  K+L+C     +F++G GGFGG R           P R 
Sbjct: 429 VADVLDKGSGVVIIMDVYSYSEKELICHNQFSLFLVGSGGFGGKRTSDKVKVAVAIPNRP 488

Query: 290 PDAVVEQRTAEDQAALYRMSGDLNPLHIDPNXATAXGHXKPILHGLXSLGFSARHXLAKF 469
           PDAV+   T+ +QAALYR+SGD NPLHIDPN A+  G  KPILHGL + GFSAR  L +F
Sbjct: 489 PDAVLTDTTSLNQAALYRLSGDWNPLHIDPNFASLAGFDKPILHGLCTFGFSARRVLQQF 548

Query: 470 XGNDSSNVKALXARFXKPVMPGETLVTXMWVXGKRVH 580
             ND S  KA+ ARF KPV PG+TL T MW  G R+H
Sbjct: 549 ADNDVSRFKAIKARFAKPVYPGQTLQTEMWKEGNRIH 585


>BC003098-1|AAH03098.1|  736|Homo sapiens hydroxysteroid (17-beta)
           dehydrogenase 4 protein.
          Length = 736

 Score =  169 bits (410), Expect = 1e-41
 Identities = 81/157 (51%), Positives = 98/157 (62%)
 Frame = +2

Query: 110 VXDVLDKGXSAVAIXNSEIFQNKQLVCRTHQHIFVLGQGGFGGPRNXKNAIGXANAPKRN 289
           V DVLDKG   V I +   +  K+L+C     +F++G GGFGG R           P R 
Sbjct: 429 VADVLDKGSGVVIIMDVYSYSEKELICHNQFSLFLVGSGGFGGKRTSDKVKVAVAIPNRP 488

Query: 290 PDAVVEQRTAEDQAALYRMSGDLNPLHIDPNXATAXGHXKPILHGLXSLGFSARHXLAKF 469
           PDAV+   T+ +QAALYR+SGD NPLHIDPN A+  G  KPILHGL + GFSAR  L +F
Sbjct: 489 PDAVLTDTTSLNQAALYRLSGDWNPLHIDPNFASLAGFDKPILHGLCTFGFSARRVLQQF 548

Query: 470 XGNDSSNVKALXARFXKPVMPGETLVTXMWVXGKRVH 580
             ND S  KA+ ARF KPV PG+TL T MW  G R+H
Sbjct: 549 ADNDVSRFKAIKARFAKPVYPGQTLQTEMWKEGNRIH 585


>AF057740-1|AAD08652.1|  736|Homo sapiens 17-beta-hydroxysteroid
           dehydrogenase IV protein.
          Length = 736

 Score =  169 bits (410), Expect = 1e-41
 Identities = 81/157 (51%), Positives = 98/157 (62%)
 Frame = +2

Query: 110 VXDVLDKGXSAVAIXNSEIFQNKQLVCRTHQHIFVLGQGGFGGPRNXKNAIGXANAPKRN 289
           V DVLDKG   V I +   +  K+L+C     +F++G GGFGG R           P R 
Sbjct: 429 VADVLDKGSGVVIIMDVYSYSEKELICHNQFSLFLVGSGGFGGKRTSDKVKVAVAIPNRP 488

Query: 290 PDAVVEQRTAEDQAALYRMSGDLNPLHIDPNXATAXGHXKPILHGLXSLGFSARHXLAKF 469
           PDAV+   T+ +QAALYR+SGD NPLHIDPN A+  G  KPILHGL + GFSAR  L +F
Sbjct: 489 PDAVLTDTTSLNQAALYRLSGDWNPLHIDPNFASLAGFDKPILHGLCTFGFSARRVLQQF 548

Query: 470 XGNDSSNVKALXARFXKPVMPGETLVTXMWVXGKRVH 580
             ND S  KA+ ARF KPV PG+TL T MW  G R+H
Sbjct: 549 ADNDVSRFKAIKARFAKPVYPGQTLQTEMWKEGNRIH 585


>AB208932-1|BAD92169.1|  471|Homo sapiens hydroxysteroid (17-beta)
           dehydrogenase 4 variant protein.
          Length = 471

 Score =  169 bits (410), Expect = 1e-41
 Identities = 81/157 (51%), Positives = 98/157 (62%)
 Frame = +2

Query: 110 VXDVLDKGXSAVAIXNSEIFQNKQLVCRTHQHIFVLGQGGFGGPRNXKNAIGXANAPKRN 289
           V DVLDKG   V I +   +  K+L+C     +F++G GGFGG R           P R 
Sbjct: 184 VADVLDKGSGVVIIMDVYSYSEKELICHNQFSLFLVGSGGFGGKRTSDKVKVAVAIPNRP 243

Query: 290 PDAVVEQRTAEDQAALYRMSGDLNPLHIDPNXATAXGHXKPILHGLXSLGFSARHXLAKF 469
           PDAV+   T+ +QAALYR+SGD NPLHIDPN A+  G  KPILHGL + GFSAR  L +F
Sbjct: 244 PDAVLTDTTSLNQAALYRLSGDWNPLHIDPNFASLAGFDKPILHGLCTFGFSARRVLQQF 303

Query: 470 XGNDSSNVKALXARFXKPVMPGETLVTXMWVXGKRVH 580
             ND S  KA+ ARF KPV PG+TL T MW  G R+H
Sbjct: 304 ADNDVSRFKAIKARFAKPVYPGQTLQTEMWKEGNRIH 340


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,731,101
Number of Sequences: 237096
Number of extensions: 2078455
Number of successful extensions: 7548
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7548
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)