Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1894
         (800 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051493-1|AAK92917.1|  598|Drosophila melanogaster GH14720p pro...   153   4e-37
AE014298-2340|AAF48572.1|  598|Drosophila melanogaster CG3415-PA...   153   4e-37

>AY051493-1|AAK92917.1|  598|Drosophila melanogaster GH14720p
           protein.
          Length = 598

 Score =  153 bits (370), Expect = 4e-37
 Identities = 78/167 (46%), Positives = 102/167 (61%), Gaps = 2/167 (1%)
 Frame = +2

Query: 86  GVFTTCCYVXDVLDKGXSAVAIXNSEIF-QNKQLVCRTHQHIFVLGQGGFGGPRNX-KNA 259
           G   T   V DV+DKG  AV + NSE F ++ +L+ R     F++G G FGG ++     
Sbjct: 405 GTLLTNGKVFDVMDKGSGAVVVTNSESFDESGRLLVRNQSTTFIVGAGKFGGKKDPIAGV 464

Query: 260 IGXANAPKRNPDAVVEQRTAEDQAALYRMSGDLNPLHIDPNXATAXGHXKPILHGLXSLG 439
           +    AP R PDA V+  T+EDQAALYR+SGD NPLHIDP  A   G   PILHGL +LG
Sbjct: 465 VPLQPAPNRQPDATVQYTTSEDQAALYRLSGDKNPLHIDPQMALLAGFKTPILHGLCTLG 524

Query: 440 FSARHXLAKFXGNDSSNVKALXARFXKPVMPGETLVTXMWVXGKRVH 580
           FS R  LA+F  N+ +  KA+  RF  PV+PG+TL   +W  G R++
Sbjct: 525 FSVRAVLAQFADNNPALFKAVKVRFSGPVIPGQTLRVDLWKQGTRIN 571



 Score = 33.9 bits (74), Expect = 0.26
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 4   PGXFADFTNVLHG*QYIEFVGDFP 75
           P    DF+N+LHG QY+E V D P
Sbjct: 379 PNSQVDFSNILHGEQYLEIVDDLP 402


>AE014298-2340|AAF48572.1|  598|Drosophila melanogaster CG3415-PA
           protein.
          Length = 598

 Score =  153 bits (370), Expect = 4e-37
 Identities = 78/167 (46%), Positives = 102/167 (61%), Gaps = 2/167 (1%)
 Frame = +2

Query: 86  GVFTTCCYVXDVLDKGXSAVAIXNSEIF-QNKQLVCRTHQHIFVLGQGGFGGPRNX-KNA 259
           G   T   V DV+DKG  AV + NSE F ++ +L+ R     F++G G FGG ++     
Sbjct: 405 GTLLTNGKVFDVMDKGSGAVVVTNSESFDESGRLLVRNQSTTFIVGAGKFGGKKDPIAGV 464

Query: 260 IGXANAPKRNPDAVVEQRTAEDQAALYRMSGDLNPLHIDPNXATAXGHXKPILHGLXSLG 439
           +    AP R PDA V+  T+EDQAALYR+SGD NPLHIDP  A   G   PILHGL +LG
Sbjct: 465 VPLQPAPNRQPDATVQYTTSEDQAALYRLSGDKNPLHIDPQMALLAGFKTPILHGLCTLG 524

Query: 440 FSARHXLAKFXGNDSSNVKALXARFXKPVMPGETLVTXMWVXGKRVH 580
           FS R  LA+F  N+ +  KA+  RF  PV+PG+TL   +W  G R++
Sbjct: 525 FSVRAVLAQFADNNPALFKAVKVRFSGPVIPGQTLRVDLWKQGTRIN 571



 Score = 33.9 bits (74), Expect = 0.26
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 4   PGXFADFTNVLHG*QYIEFVGDFP 75
           P    DF+N+LHG QY+E V D P
Sbjct: 379 PNSQVDFSNILHGEQYLEIVDDLP 402


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,252,947
Number of Sequences: 53049
Number of extensions: 606676
Number of successful extensions: 1428
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)