Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1886
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         24   4.8  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    23   6.3  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   8.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.4  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 338 DLLQHDEETDPGGSGRVNPVLS 403
           D LQ +E   P G+GR+  V S
Sbjct: 98  DQLQQEETDAPAGAGRIRKVRS 119


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 371 LDLFPHHVVASLLHGEPLIPDGDGADVTLC 282
           L + P H V  L HGE  + D     V LC
Sbjct: 46  LKINPLHTVPVLRHGELTLTDSHAILVYLC 75


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 74  IRECHFELN*IMNCASCRIRHEAS 3
           +R+CH ++  + NCA    + +A+
Sbjct: 643 LRQCHLQMQSLANCAQKAAQMQAA 666


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 568 PPAXTSRGERRITPPST 618
           PP  + R    ITPPST
Sbjct: 848 PPGASGRSSAVITPPST 864


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,641
Number of Sequences: 2352
Number of extensions: 10114
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)