Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1883
(800 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 30 0.072
AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein. 30 0.072
AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein. 30 0.072
AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein. 30 0.096
Z22930-7|CAA80512.1| 274|Anopheles gambiae trypsin protein. 28 0.39
Z18889-1|CAA79327.1| 274|Anopheles gambiae trypsin protein. 28 0.39
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 25 2.1
AJ302655-1|CAC35520.1| 332|Anopheles gambiae gSG5 protein protein. 25 3.6
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 30.3 bits (65), Expect = 0.072
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Frame = +1
Query: 346 DLTANMIAMSANVKLLNQK-YNNKHFNDFKPMEDTIYADE-DQDLSTLETADKEEDKDKS 519
D T+N I +S + K + + + + N K I E D D + +D ++D
Sbjct: 282 DPTSNKITLSRDAKFIEMEDFEHAAINRSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDR 341
Query: 520 NYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGD 627
E D T++EE+ D M D ++ + D
Sbjct: 342 LESEEEDSTDETLIEEELTDTDSSMCDSTNEDDGDD 377
>AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 30.3 bits (65), Expect = 0.072
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Frame = +1
Query: 346 DLTANMIAMSANVKLLNQK-YNNKHFNDFKPMEDTIYADE-DQDLSTLETADKEEDKDKS 519
D T+N I +S + K + + + + N K I E D D + +D ++D
Sbjct: 52 DPTSNKITLSRDAKFIEMEDFEHAAINRSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDR 111
Query: 520 NYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGD 627
E D T++EE+ D M D ++ + D
Sbjct: 112 LESEEEDSTDETLIEEELTDTDSSMCDSTNEDDGDD 147
>AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 30.3 bits (65), Expect = 0.072
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Frame = +1
Query: 346 DLTANMIAMSANVKLLNQK-YNNKHFNDFKPMEDTIYADE-DQDLSTLETADKEEDKDKS 519
D T+N I +S + K + + + + N K I E D D + +D ++D
Sbjct: 52 DPTSNKITLSRDAKFIEMEDFEHAAINRSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDR 111
Query: 520 NYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGD 627
E D T++EE+ D M D ++ + D
Sbjct: 112 LESEEEDSTDETLIEEELTDTDSSMCDSTNEDDGDD 147
>AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein.
Length = 215
Score = 29.9 bits (64), Expect = 0.096
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Frame = +1
Query: 346 DLTANMIAMSANVKLLNQK-YNNKHFNDFKPMEDTIYADE-DQDLSTLETADKEEDKDKS 519
D T+N I +S + K + + + + N K I E D DL + +D ++D D
Sbjct: 52 DPTSNKITLSRDAKFIEMEDFEHAAINRSKKTNPQIVEYEFDDDLPFDDDSDFDDDSDFD 111
Query: 520 NY--DSLEKLH----DITVLEEDNIGDDEDMLDVADDPESGD 627
+ D LE D T++EE+ D M D ++ + D
Sbjct: 112 DDVGDRLESEEEDSTDETLIEEELTDTDSSMCDSTNEDDGDD 153
>Z22930-7|CAA80512.1| 274|Anopheles gambiae trypsin protein.
Length = 274
Score = 27.9 bits (59), Expect = 0.39
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 355 ANMIAMSANVKLLNQKYNNKHFNDFKPMED 444
+N + +ANV +NQK NK ++DF + D
Sbjct: 181 SNAVLRAANVPTVNQKECNKAYSDFGGVTD 210
>Z18889-1|CAA79327.1| 274|Anopheles gambiae trypsin protein.
Length = 274
Score = 27.9 bits (59), Expect = 0.39
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 355 ANMIAMSANVKLLNQKYNNKHFNDFKPMED 444
+N + +ANV +NQK NK ++DF + D
Sbjct: 181 SNAVLRAANVPTVNQKECNKAYSDFGGVTD 210
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 25.4 bits (53), Expect = 2.1
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
Frame = +1
Query: 448 IYADEDQDLSTLETADKEEDKDKSNYDSLEKL-HDITVLE----------EDNIGDDEDM 594
I D D +L T +KEE + + EKL H+ T E +DN+ D D
Sbjct: 713 IAVDNLADADSLTTVEKEEGDNPDGEE--EKLSHEPTPTEHGDDGFMDHDKDNLDSDNDP 770
Query: 595 LDVADDPESGD 627
++++DD + D
Sbjct: 771 MNISDDYDGQD 781
>AJ302655-1|CAC35520.1| 332|Anopheles gambiae gSG5 protein protein.
Length = 332
Score = 24.6 bits (51), Expect = 3.6
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 361 MIAMSANVKLLNQKYNNKHFNDFKPMEDTIYADEDQDLSTLET-ADKEEDKDKSNYDSLE 537
M A+ + LN++ N+F D DED + L D+ E + ++N +E
Sbjct: 154 MRAVKRKMDELNEQIRTYFQNEFVEYRDVCLPDEDHCMKLLHAQIDQYEQRLRTN---VE 210
Query: 538 KLHD 549
+ HD
Sbjct: 211 ECHD 214
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,665
Number of Sequences: 2352
Number of extensions: 14756
Number of successful extensions: 44
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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