Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1880
(833 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010280-1|AAQ23598.1| 113|Drosophila melanogaster RE04903p pro... 40 0.006
AE014134-1855|AAF52927.2| 287|Drosophila melanogaster CG5056-PA... 40 0.006
AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p pro... 36 0.068
AY129439-1|AAM76181.1| 751|Drosophila melanogaster LD08185p pro... 36 0.068
AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-P... 36 0.068
AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-P... 36 0.068
AE014296-3448|AAF51661.2| 1058|Drosophila melanogaster CG10588-P... 30 3.4
AY071186-1|AAL48808.1| 316|Drosophila melanogaster RE23541p pro... 29 5.9
AY051651-1|AAK93075.1| 1469|Drosophila melanogaster LD02061p pro... 29 5.9
AF457205-1|AAL91368.1| 1464|Drosophila melanogaster legless prot... 29 5.9
AE014135-77|AAF59345.2| 1469|Drosophila melanogaster CG2041-PA p... 29 5.9
AE014134-3621|ABI31344.1| 189|Drosophila melanogaster CG41484-P... 29 5.9
AE014134-351|AAF51294.1| 316|Drosophila melanogaster CG10874-PA... 29 5.9
AE014296-669|AAF47779.2| 942|Drosophila melanogaster CG14973-PA... 29 7.8
>BT010280-1|AAQ23598.1| 113|Drosophila melanogaster RE04903p
protein.
Length = 113
Score = 39.5 bits (88), Expect = 0.006
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 645 DVTIG*IS*LFSKPLVHIPKKMSSMAEMMF 734
DVTIG ++ F +VHIPKKMSSMAEMM+
Sbjct: 84 DVTIGELASYFDT-IVHIPKKMSSMAEMMY 112
>AE014134-1855|AAF52927.2| 287|Drosophila melanogaster CG5056-PA
protein.
Length = 287
Score = 39.5 bits (88), Expect = 0.006
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 645 DVTIG*IS*LFSKPLVHIPKKMSSMAEMMF 734
DVTIG ++ F +VHIPKKMSSMAEMM+
Sbjct: 258 DVTIGELASYFDT-IVHIPKKMSSMAEMMY 286
>AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p protein.
Length = 1124
Score = 35.9 bits (79), Expect = 0.068
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +3
Query: 375 DNNDISKKCSLPTENNETLNSDTLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWR 554
D D+ K + E + + S T LCT + Q +++E+ EP + T +D TK
Sbjct: 811 DQCDVIYKTTTAIETGQEIFSKTNLLCTDICQLFQYLLNNETKEPERQKTITDIQTK--L 868
Query: 555 NDIAKLKEKNQA 590
DI KL EK +A
Sbjct: 869 RDIEKLIEKIKA 880
>AY129439-1|AAM76181.1| 751|Drosophila melanogaster LD08185p
protein.
Length = 751
Score = 35.9 bits (79), Expect = 0.068
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +3
Query: 375 DNNDISKKCSLPTENNETLNSDTLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWR 554
D D+ K + E + + S T LCT + Q +++E+ EP + T +D TK
Sbjct: 438 DQCDVIYKTTTAIETGQEIFSKTNLLCTDICQLFQYLLNNETKEPERQKTITDIQTK--L 495
Query: 555 NDIAKLKEKNQA 590
DI KL EK +A
Sbjct: 496 RDIEKLIEKIKA 507
>AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-PB,
isoform B protein.
Length = 1087
Score = 35.9 bits (79), Expect = 0.068
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +3
Query: 375 DNNDISKKCSLPTENNETLNSDTLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWR 554
D D+ K + E + + S T LCT + Q +++E+ EP + T +D TK
Sbjct: 774 DQCDVIYKTTTAIETGQEIFSKTNLLCTDICQLFQYLLNNETKEPERQKTITDIQTK--L 831
Query: 555 NDIAKLKEKNQA 590
DI KL EK +A
Sbjct: 832 RDIEKLIEKIKA 843
>AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-PA,
isoform A protein.
Length = 1124
Score = 35.9 bits (79), Expect = 0.068
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +3
Query: 375 DNNDISKKCSLPTENNETLNSDTLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWR 554
D D+ K + E + + S T LCT + Q +++E+ EP + T +D TK
Sbjct: 811 DQCDVIYKTTTAIETGQEIFSKTNLLCTDICQLFQYLLNNETKEPERQKTITDIQTK--L 868
Query: 555 NDIAKLKEKNQA 590
DI KL EK +A
Sbjct: 869 RDIEKLIEKIKA 880
>AE014296-3448|AAF51661.2| 1058|Drosophila melanogaster CG10588-PA
protein.
Length = 1058
Score = 30.3 bits (65), Expect = 3.4
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 240 SVXTRVVKKKCTCMSQKRFFNRGVSKXKYNNNILKEPVLKILQCCDNNDISK-KCSLPTE 416
S+ V++ ++++ FFNR ++ + +++ KE VL L D N++ K +
Sbjct: 917 SLDEEVLRNWSEIVTKEYFFNRIETQIQMLSHLTKEDVLNFLNDNDKNNLRKLSVQVVGN 976
Query: 417 NNETLNS 437
+N+T NS
Sbjct: 977 HNQTSNS 983
>AY071186-1|AAL48808.1| 316|Drosophila melanogaster RE23541p
protein.
Length = 316
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 486 ISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNNSCCQQALNP 638
+SSE P +T + ++ K ND K NQ S QN Q+ NP
Sbjct: 140 VSSEWLAPDPTATDNHNTPKNNNNDSTKPNNNNQHSNSNQNTPRLQRRKNP 190
>AY051651-1|AAK93075.1| 1469|Drosophila melanogaster LD02061p
protein.
Length = 1469
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 402 SLPTENNETLNSDTLNLCTLVQNCNQLKISSESNEPPTKSTHSDS 536
S+P N T+ + T + + +NC Q S SN+ +++T S S
Sbjct: 821 SVPQANTSTVQAGTTTVLSANKNCFQADTPSPSNQNRSRNTGSSS 865
>AF457205-1|AAL91368.1| 1464|Drosophila melanogaster legless
protein.
Length = 1464
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 402 SLPTENNETLNSDTLNLCTLVQNCNQLKISSESNEPPTKSTHSDS 536
S+P N T+ + T + + +NC Q S SN+ +++T S S
Sbjct: 816 SVPQANTSTVQAGTTTVLSANKNCFQADTPSPSNQNRSRNTGSSS 860
>AE014135-77|AAF59345.2| 1469|Drosophila melanogaster CG2041-PA
protein.
Length = 1469
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 402 SLPTENNETLNSDTLNLCTLVQNCNQLKISSESNEPPTKSTHSDS 536
S+P N T+ + T + + +NC Q S SN+ +++T S S
Sbjct: 821 SVPQANTSTVQAGTTTVLSANKNCFQADTPSPSNQNRSRNTGSSS 865
>AE014134-3621|ABI31344.1| 189|Drosophila melanogaster CG41484-PA
protein.
Length = 189
Score = 29.5 bits (63), Expect = 5.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 591 KQSTQNNSCCQQALNPPCDVT 653
+Q T+NN+C +L+PPC VT
Sbjct: 154 QQVTRNNNCTTVSLSPPCCVT 174
>AE014134-351|AAF51294.1| 316|Drosophila melanogaster CG10874-PA,
isoform A protein.
Length = 316
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 486 ISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNNSCCQQALNP 638
+SSE P +T + ++ K ND K NQ S QN Q+ NP
Sbjct: 140 VSSEWLAPDPTATDNHNTPKNNNNDSTKPNNNNQHSNSNQNTPRLQRRKNP 190
>AE014296-669|AAF47779.2| 942|Drosophila melanogaster CG14973-PA
protein.
Length = 942
Score = 29.1 bits (62), Expect = 7.8
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +3
Query: 408 PTENNETLNSDTLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQ 587
PT NN + N DTLN + N N ++++N + + H+ + +AK E
Sbjct: 171 PTNNNTSNNKDTLNNNNVNNNSNN-NCNNQTNTSISNNNHATNPDMISPTIMAKFLEDEL 229
Query: 588 AKQSTQNNSCCQ 623
++ CQ
Sbjct: 230 KANEVKHCDTCQ 241
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,884,684
Number of Sequences: 53049
Number of extensions: 682651
Number of successful extensions: 1714
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -