Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1879
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione S-tran...    26   1.1  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    24   4.4  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    24   4.4  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   7.6  

>AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione
           S-transferase D5 protein.
          Length = 216

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 520 LVEKNALKSQLRTLQEQLAEMHEKYVQLCNRVGKESETV 636
           L+EK    ++LR   EQ  ++ EK+V  C  V  +  T+
Sbjct: 115 LIEKQQPSAELRGKLEQALDLTEKFVTECRFVAADHLTL 153


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 390 TETVPSAAARRCSGALRHQPQQQH 461
           T +VP    RR  G   H P+ QH
Sbjct: 126 TSSVPLTIHRRSPGVPHHVPEPQH 149


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 390 TETVPSAAARRCSGALRHQPQQQH 461
           T +VP    RR  G   H P+ QH
Sbjct: 126 TSSVPLTIHRRSPGVPHHVPEPQH 149


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 280 RSSPRPLDVKRARVENIVSTMRSSPAP 360
           R SP P +  RA +E IVS +  +  P
Sbjct: 443 RGSPGPPETDRAELERIVSDLFPTHPP 469


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.305    0.125    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,484
Number of Sequences: 2352
Number of extensions: 10676
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)