Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1877
         (592 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   283   2e-76
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   283   2e-76
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   283   2e-76
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   283   2e-76
BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   239   2e-63
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   239   2e-63
AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p pro...    31   0.88 
AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA...    31   0.88 
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    31   1.5  

>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  283 bits (693), Expect = 2e-76
 Identities = 137/172 (79%), Positives = 154/172 (89%)
 Frame = +1

Query: 19  SXSQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRE 198
           S +QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRE
Sbjct: 21  SIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRE 80

Query: 199 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 378
           LEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGK
Sbjct: 81  LEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGK 140

Query: 379 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 534
           RIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 141 RIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  283 bits (693), Expect = 2e-76
 Identities = 137/172 (79%), Positives = 154/172 (89%)
 Frame = +1

Query: 19  SXSQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRE 198
           S +QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRE
Sbjct: 21  SIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRE 80

Query: 199 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 378
           LEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGK
Sbjct: 81  LEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGK 140

Query: 379 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 534
           RIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 141 RIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  283 bits (693), Expect = 2e-76
 Identities = 137/172 (79%), Positives = 154/172 (89%)
 Frame = +1

Query: 19  SXSQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRE 198
           S +QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRE
Sbjct: 21  SIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRE 80

Query: 199 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 378
           LEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGK
Sbjct: 81  LEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGK 140

Query: 379 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 534
           RIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 141 RIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  283 bits (693), Expect = 2e-76
 Identities = 137/172 (79%), Positives = 154/172 (89%)
 Frame = +1

Query: 19  SXSQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRE 198
           S +QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRE
Sbjct: 21  SIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRE 80

Query: 199 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 378
           LEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGK
Sbjct: 81  LEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGK 140

Query: 379 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 534
           RIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 141 RIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  239 bits (586), Expect = 2e-63
 Identities = 117/148 (79%), Positives = 132/148 (89%)
 Frame = +1

Query: 19  SXSQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRE 198
           S +QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRE
Sbjct: 21  SIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRE 80

Query: 199 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 378
           LEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGK
Sbjct: 81  LEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGK 140

Query: 379 RIRVKLDGSQLIKVHLDKNQQTTIEHKV 462
           RIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 141 RIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  239 bits (586), Expect = 2e-63
 Identities = 117/148 (79%), Positives = 132/148 (89%)
 Frame = +1

Query: 19  SXSQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRE 198
           S +QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRE
Sbjct: 21  SIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRE 80

Query: 199 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 378
           LEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGK
Sbjct: 81  LEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGK 140

Query: 379 RIRVKLDGSQLIKVHLDKNQQTTIEHKV 462
           RIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 141 RIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p protein.
          Length = 1394

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 13/163 (7%)
 Frame = +1

Query: 16   TSXSQALVELETNSDLKAQLR-ELYITKAKEIELHNKKSIIIYVPMP----KLKAFQKIQ 180
            +S ++ ++EL  NS L +QL  E    K  E++    +++    P P    +  AF+ +Q
Sbjct: 1122 SSVTERVLEL-ANSLLDSQLSVEQATLKPMELKTTRCRALSKTAPFPVSCDEAGAFRPLQ 1180

Query: 181  IR-----LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAI-- 339
                    V     +    HV   GDR+    P     +         R++ + YD I  
Sbjct: 1181 CNGRSCWCVDAAGNQLQSTHVFGAGDRRCSHVPIEAVAIELHLTNSSGRSIRNAYDTIRR 1240

Query: 340  -LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVD 465
             L+ L+    +   R++   DGS +++  L    +  +   ++
Sbjct: 1241 ELQQLLGGESVENLRVQENFDGSAIVRFELHNEAKVDLAFAIE 1283


>AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA
            protein.
          Length = 1511

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 13/163 (7%)
 Frame = +1

Query: 16   TSXSQALVELETNSDLKAQLR-ELYITKAKEIELHNKKSIIIYVPMP----KLKAFQKIQ 180
            +S ++ ++EL  NS L +QL  E    K  E++    +++    P P    +  AF+ +Q
Sbjct: 1239 SSVTERVLEL-ANSLLDSQLSVEQATLKPMELKTTRCRALSKTAPFPVSCDEAGAFRPLQ 1297

Query: 181  IR-----LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAI-- 339
                    V     +    HV   GDR+    P     +         R++ + YD I  
Sbjct: 1298 CNGRSCWCVDAAGNQLQSTHVFGAGDRRCSHVPIEAVAIELHLTNSSGRSIRNAYDTIRR 1357

Query: 340  -LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVD 465
             L+ L+    +   R++   DGS +++  L    +  +   ++
Sbjct: 1358 ELQQLLGGESVENLRVQENFDGSAIVRFELHNEAKVDLAFAIE 1400


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
           protein.
          Length = 1489

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/66 (27%), Positives = 36/66 (54%)
 Frame = +1

Query: 118 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 297
           NKK  ++   + KL  +++    +  + + K   KH+  V + K  PK + KT+ + K+K
Sbjct: 567 NKK--LLNSSVVKLSLYEQNPRMVPSKFQPKCEEKHMEPVAEEKPKPKSAAKTKESRKRK 624

Query: 298 RPRSRT 315
           +P ++T
Sbjct: 625 QPVAQT 630


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,186,209
Number of Sequences: 53049
Number of extensions: 487225
Number of successful extensions: 1200
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)