Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1875
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 37 0.019
AC024817-3|AAK68524.1| 482|Caenorhabditis elegans Hypothetical ... 32 0.55
Z66500-8|CAE17939.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.96
U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 1.3
AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical ... 31 1.3
Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 3.9
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 3.9
U53344-7|AAM15599.1| 183|Caenorhabditis elegans Hypothetical pr... 29 5.1
U53344-6|AAK77632.2| 702|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z79752-2|CAB02079.1| 172|Caenorhabditis elegans Hypothetical pr... 28 6.8
U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of... 28 6.8
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 28 6.8
L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein. 28 6.8
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 8.9
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 28 8.9
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 28 8.9
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 28 8.9
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 28 8.9
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 28 8.9
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +3
Query: 627 TPTYTSTTRNATITXPPSRLGMNPSTNTRTKSSVSSTT 740
TPT TSTT T T P + P+T T T S+ ++TT
Sbjct: 64 TPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTT 101
>AC024817-3|AAK68524.1| 482|Caenorhabditis elegans Hypothetical
protein Y54G2A.11a protein.
Length = 482
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +2
Query: 386 PRDIGDSYEFKVPNKQADIILSVETTESNAKTYKDIVVPLVSHLIDSLKSKHITDVKVFL 565
PR + Y F+VP D L + +E + +K+ V P + S K KH+ ++ L
Sbjct: 206 PRPVPSDYLFEVPAFPEDFGLQRQNSEKRSDVWKEFVKPAMRKAPLSDKKKHLHMLRDIL 265
Query: 566 VGHTSXYPYPILYDTDLKLKNAH 634
+ P D+ N H
Sbjct: 266 RRPKASKPIRSFEILDIFTNNTH 288
>Z66500-8|CAE17939.1| 312|Caenorhabditis elegans Hypothetical
protein T05C12.11 protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 597 SCMTLTSN*KTPTYTSTTRNATITXPPSRLGMNPSTNTRTKSSVSSTTW 743
S + LT+ T T +TT+N T LG NP+ ++ T ++W
Sbjct: 212 SSLVLTTTPSTSTSRTTTKNDTNKWSKFTLGKNPTVSSSTSEPKMESSW 260
>U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical
protein C31H1.5 protein.
Length = 315
Score = 31.1 bits (67), Expect = 0.96
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 573 IPPNIHIRSCMTLTSN*KTPTYTSTTRNATITXPPSRLGMNPSTNTRTKSSVSSTT 740
+P +H + T TS T T STT+N T+T P N ST T ++++ T
Sbjct: 241 LPFYLHYKEDTTTTSTTDTTTTISTTKNTTVTQKPKTNTTN-STVTIEETTLEEKT 295
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +3
Query: 606 TLTSN*KTPTYTSTTRNATITXPPSR--LGMNPSTNTRTKSSVSSTTWKIHMXXTTSKP 776
T T+ T T T+T T T P + P+T T T + STT TTS P
Sbjct: 254 TTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTP 312
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 606 TLTSN*KTPTYTSTTRNATITXPPSRLGMNPSTNTRTKSSVSSTTWKIHMXXTTS 770
T T+ TPT T+T T T + P+T T T ++ ++T TT+
Sbjct: 124 TPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTT 178
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 606 TLTSN*KTPTYTSTTRNATITXPPSRLGMNPSTNTRTKSSVSSTTWKIHMXXTTSK 773
T T+ TPT T+T T T ++ + T+T S+ ++TT TSK
Sbjct: 272 TTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTPTTTTTTPKTPFDTSK 327
>AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical
protein K08A2.1 protein.
Length = 411
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 76 VPSGPQLSTGASARTLPSPAARCIPPPRLRTGLRGNIAAQDPVI 207
VP+ P +++ + A PSP A PPPRL +PV+
Sbjct: 262 VPTAPDVTSESPATPQPSPPAVTPPPPRLLPAATTESHQTEPVL 305
>Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical
protein D2085.3 protein.
Length = 666
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/91 (21%), Positives = 36/91 (39%)
Frame = +2
Query: 17 DDFRLPNGKICTSESEFGNAYRLARSCPQVQAPEHSHHQLHDASLPPACEQVFGGISPLR 196
DD +PNG ES GN + P +Q + +++ + Q G +
Sbjct: 384 DDVVIPNGAHIPKESIIGNGVMYPKELPNIQNTAIFKNAINEETFEKLSSQPIGNVH--- 440
Query: 197 TLSLFMDMSPFXQACIHAVTGTDAAKDLHEA 289
+S F + PF + ++ T +D E+
Sbjct: 441 -VSKFRNGGPFWRRSVNGKTNFALEEDDSES 470
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 570 DIPPNIHIRSCMTLTSN*KTPTYTSTTRNATITXPPSRLG-MNPSTNTRTKSSVSSTT 740
D P H + +++ T T TST+R+ + P +R +T+T T SS ++TT
Sbjct: 88 DTPIPTHSSPSTSTSTSTSTSTSTSTSRSTSTVTPTTRSSTTTTATSTPTSSSKATTT 145
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 597 SCMTLTSN*KTPTYTSTTRNATITXPPSRLGMNPSTNTRTKSSVSSTTWKIHMXXTT 767
+C + T+ T T T TT+ T T P+ P+T T T ++ +TT TT
Sbjct: 244 TCASTTTVSTTSTVT-TTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTT 299
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +3
Query: 606 TLTSN*KTPTYTSTTRNATITXPPSRLGMNPSTNTRTKSSVSSTTWKIHMXXTTSK 773
T T+ T T STT T T P+ P+T T + S+TT+K TT++
Sbjct: 289 TTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTT----TASTTTFKTTTITTTTQ 340
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +3
Query: 591 IRSCMTLTSN*KTPTYTSTTRNATITXPPSRLGMNPSTNTRTKSSVSSTTWKIHMXXTTS 770
I S + T++ T T TT T T P+ P+T T +++ STT TT+
Sbjct: 273 IPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPTTTTTMQTTTPSTTSTPTTTSTTT 332
Query: 771 KPAA 782
+A
Sbjct: 333 TTSA 336
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/60 (35%), Positives = 25/60 (41%)
Frame = +3
Query: 591 IRSCMTLTSN*KTPTYTSTTRNATITXPPSRLGMNPSTNTRTKSSVSSTTWKIHMXXTTS 770
IR T T K T TST + T T + P+T T V +TT K TTS
Sbjct: 373 IRQVTTTTK--KPSTTTSTKKLTTTTTTTPKPSQKPTTTTTKSPVVITTTTKTSPKPTTS 430
>U53344-7|AAM15599.1| 183|Caenorhabditis elegans Hypothetical
protein T07H6.1b protein.
Length = 183
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 569 GHTSXYPYPILYDTDLKLKNAHVHFDDQERYNNXPTIKTGYESFDKYXD 715
G++S Y + D LKL +HF D + +N + T Y S D D
Sbjct: 73 GNSSQY---VSLDVPLKLLEGEIHFPDAQFWNTEAELITRYVSKDSETD 118
>U53344-6|AAK77632.2| 702|Caenorhabditis elegans Hypothetical
protein T07H6.1a protein.
Length = 702
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 569 GHTSXYPYPILYDTDLKLKNAHVHFDDQERYNNXPTIKTGYESFDKYXD 715
G++S Y + D LKL +HF D + +N + T Y S D D
Sbjct: 592 GNSSQY---VSLDVPLKLLEGEIHFPDAQFWNTEAELITRYVSKDSETD 637
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 28.3 bits (60), Expect = 6.8
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +3
Query: 579 PNIHIRSCMTLTSN*KTPTYTSTTRNATITXPP-SRLGMNPSTNTRTKSSVSSTT-WKIH 752
PN+ + T + P TSTT + T PP P T + + V STT +
Sbjct: 406 PNVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVT 465
Query: 753 MXXTTSKPAAIGGRSS 800
M TT K SS
Sbjct: 466 MPSTTEKTTFTSTSSS 481
>Z79752-2|CAB02079.1| 172|Caenorhabditis elegans Hypothetical
protein D2005.2 protein.
Length = 172
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 551 VKVFLVGHTSXYPYPILYDTDLKLKNAHVHFDDQERYNNXPTIKTGYESFDKYXDQ 718
++ L+G T+ YPY I + + + +R++N G + FD+Y D+
Sbjct: 16 LQCLLIGFTAAYPYLIFPASPSSGDSRRLVKRAFDRFDNSGVFSFGAKRFDRYDDE 71
>U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of
certain neuronsprotein 1 protein.
Length = 778
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 582 NIHIRSCMTLTSN*KTPTYTSTTRNATITXPPS 680
N+ S T T+ PT TSTT T T PP+
Sbjct: 342 NMTTTSTTTTTTTTPPPTTTSTTTTTTTTPPPT 374
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 627 TPTYTSTTRNATITXPPSRLGMNPSTNTRTKSSVSSTTWKIHMXXTTSKPAAI 785
T + ++TT T P + P+T T T S+ +STT + TTS P +
Sbjct: 461 TTSSSTTTTTTTTPVPVTSTTTEPTTTTYTTSTSTSTT--TTLPPTTSTPKIV 511
>L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein.
Length = 778
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 582 NIHIRSCMTLTSN*KTPTYTSTTRNATITXPPS 680
N+ S T T+ PT TSTT T T PP+
Sbjct: 342 NMTTTSTTTTTTTTPPPTTTSTTTTTTTTPPPT 374
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 606 TLTSN*KTPTYTSTTRNATITXPP-SRLGMNPSTN----TRTKSSVSSTT 740
T+T+ T T T++T + + T P S + +PST+ T T SS SSTT
Sbjct: 422 TVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTT 471
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 606 TLTSN*KTPTYTSTTRNATITXPP-SRLGMNPSTN----TRTKSSVSSTT 740
T+T+ T T T++T + + T P S + +PST+ T T SS SSTT
Sbjct: 422 TVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTT 471
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 167 QVFGGISPLRTLSLFMDMSPFXQACIHAVTGTDAAKDLHEACDLG 301
++ GG L LSL + M F A ++ + DAA DL ++G
Sbjct: 1099 ELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALDLSHTANIG 1143
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 167 QVFGGISPLRTLSLFMDMSPFXQACIHAVTGTDAAKDLHEACDLG 301
++ GG L LSL + M F A ++ + DAA DL ++G
Sbjct: 1099 ELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALDLSHTANIG 1143
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 167 QVFGGISPLRTLSLFMDMSPFXQACIHAVTGTDAAKDLHEACDLG 301
++ GG L LSL + M F A ++ + DAA DL ++G
Sbjct: 1099 ELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALDLSHTANIG 1143
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 202 QGPERRYSP-EDLFAGGGEGCIVQLVMGV 119
+GP ++ +P EDL G GE C+V + G+
Sbjct: 209 KGPCKKRNPCEDLRCGPGEDCVVNQINGI 237
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 202 QGPERRYSP-EDLFAGGGEGCIVQLVMGV 119
+GP ++ +P EDL G GE C+V + G+
Sbjct: 217 KGPCKKRNPCEDLRCGPGEDCVVNQINGI 245
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 167 QVFGGISPLRTLSLFMDMSPFXQACIHAVTGTDAAKDLHEACDLG 301
++ GG L LSL + M F A ++ + DAA DL ++G
Sbjct: 1099 ELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALDLSHTANIG 1143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,774,237
Number of Sequences: 27780
Number of extensions: 429936
Number of successful extensions: 1655
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1648
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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