Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1872
(800 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 288 3e-78
03_01_0547 + 4093196-4093657,4094267-4095148 288 3e-78
03_01_0544 + 4082528-4082989,4083585-4084466 288 3e-78
03_01_0543 + 4076981-4077442,4078145-4079026 288 3e-78
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 136 2e-32
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 132 2e-31
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 132 4e-31
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 118 4e-27
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 118 4e-27
02_04_0462 + 23131433-23132836 81 8e-16
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 75 7e-14
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 30 2.5
01_02_0044 - 10559637-10560509,10562849-10563295 30 2.5
09_04_0232 - 15882589-15882720,15882799-15882889,15882987-158830... 29 4.3
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 29 4.3
08_02_0869 - 22031889-22032017,22032114-22032204,22032289-220323... 29 4.3
10_01_0291 + 3010685-3010838,3010954-3011489 29 5.7
10_01_0290 + 2999775-2999928,3000281-3000816 29 5.7
10_01_0204 + 2199778-2200835,2201212-2201311 29 5.7
09_04_0194 + 15504780-15506114 29 5.7
09_01_0129 - 1954470-1955129,1956285-1956371,1956475-1956663,195... 29 5.7
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 29 5.7
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 28 7.5
03_04_0206 - 18493178-18495310 28 7.5
03_01_0019 + 167900-168343,168567-168751,169076-169430 28 7.5
02_04_0343 - 22166148-22166318,22166422-22166465,22166563-221666... 28 7.5
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 28 9.9
09_04_0483 + 17979566-17980019,17980242-17980321,17980431-179808... 28 9.9
02_01_0772 - 5755371-5756654,5757808-5757834 28 9.9
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 288 bits (707), Expect = 3e-78
Identities = 140/200 (70%), Positives = 161/200 (80%)
Frame = +1
Query: 1 LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 180
LI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KE
Sbjct: 114 LIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKE 173
Query: 181 VSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD 360
VSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD
Sbjct: 174 VSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALD 221
Query: 361 AILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVE 540
I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVE
Sbjct: 222 QINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVE 281
Query: 541 MHHEALQEAVPGDNVGFNVK 600
MHHEALQEA+PGDNVGFNVK
Sbjct: 282 MHHEALQEALPGDNVGFNVK 301
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/37 (62%), Positives = 32/37 (86%)
Frame = +2
Query: 599 KNVSVKELRRGYVAGDSQNNPPKGAADFTAQVIXLNH 709
KNV+VK+L+RGYVA +S+++P K AA FT+QVI +NH
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNH 337
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 711 PGQISNGYXPVLDCHTGHI 767
PGQI NGY PVLDCHT HI
Sbjct: 338 PGQIGNGYAPVLDCHTSHI 356
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 288 bits (707), Expect = 3e-78
Identities = 140/200 (70%), Positives = 161/200 (80%)
Frame = +1
Query: 1 LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 180
LI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KE
Sbjct: 114 LIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKE 173
Query: 181 VSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD 360
VSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD
Sbjct: 174 VSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALD 221
Query: 361 AILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVE 540
I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVE
Sbjct: 222 QINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVE 281
Query: 541 MHHEALQEAVPGDNVGFNVK 600
MHHEALQEA+PGDNVGFNVK
Sbjct: 282 MHHEALQEALPGDNVGFNVK 301
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/37 (62%), Positives = 32/37 (86%)
Frame = +2
Query: 599 KNVSVKELRRGYVAGDSQNNPPKGAADFTAQVIXLNH 709
KNV+VK+L+RGYVA +S+++P K AA FT+QVI +NH
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNH 337
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 711 PGQISNGYXPVLDCHTGHI 767
PGQI NGY PVLDCHT HI
Sbjct: 338 PGQIGNGYAPVLDCHTSHI 356
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 288 bits (707), Expect = 3e-78
Identities = 140/200 (70%), Positives = 161/200 (80%)
Frame = +1
Query: 1 LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 180
LI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KE
Sbjct: 114 LIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKE 173
Query: 181 VSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD 360
VSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD
Sbjct: 174 VSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALD 221
Query: 361 AILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVE 540
I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVE
Sbjct: 222 QINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVE 281
Query: 541 MHHEALQEAVPGDNVGFNVK 600
MHHEALQEA+PGDNVGFNVK
Sbjct: 282 MHHEALQEALPGDNVGFNVK 301
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/37 (62%), Positives = 32/37 (86%)
Frame = +2
Query: 599 KNVSVKELRRGYVAGDSQNNPPKGAADFTAQVIXLNH 709
KNV+VK+L+RGYVA +S+++P K AA FT+QVI +NH
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNH 337
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 711 PGQISNGYXPVLDCHTGHI 767
PGQI NGY PVLDCHT HI
Sbjct: 338 PGQIGNGYAPVLDCHTSHI 356
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 288 bits (707), Expect = 3e-78
Identities = 140/200 (70%), Positives = 161/200 (80%)
Frame = +1
Query: 1 LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 180
LI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KE
Sbjct: 114 LIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKE 173
Query: 181 VSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD 360
VSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD
Sbjct: 174 VSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALD 221
Query: 361 AILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVE 540
I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVE
Sbjct: 222 QINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVE 281
Query: 541 MHHEALQEAVPGDNVGFNVK 600
MHHEALQEA+PGDNVGFNVK
Sbjct: 282 MHHEALQEALPGDNVGFNVK 301
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/37 (62%), Positives = 32/37 (86%)
Frame = +2
Query: 599 KNVSVKELRRGYVAGDSQNNPPKGAADFTAQVIXLNH 709
KNV+VK+L+RGYVA +S+++P K AA FT+QVI +NH
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNH 337
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 711 PGQISNGYXPVLDCHTGHI 767
PGQI NGY PVLDCHT HI
Sbjct: 338 PGQIGNGYAPVLDCHTSHI 356
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 136 bits (329), Expect = 2e-32
Identities = 76/203 (37%), Positives = 116/203 (57%), Gaps = 3/203 (1%)
Frame = +1
Query: 1 LIVAAGTGEFEAGISKNG--QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 174
L++ A G FEAG+ NG QT+EH+ L + GV LIV VNKMDS E YS+ RF IK
Sbjct: 341 LVIDASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVVVNKMDSVE--YSKERFNFIK 398
Query: 175 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 354
++ ++++ GY +AVA+VPIS +N++ ++ W DG CL++A
Sbjct: 399 SQLGAFLRSCGYKDSAVAWVPISAMENENLMTTASDTR-LSSWY--------DGNCLLKA 449
Query: 355 LDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPANITTEVK 531
+D + PP+R KPLRLP+ DV+ +G V + G+VE G + G+ ++ P VK
Sbjct: 450 IDTLPPPSRDVSKPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMPFGELAVVK 509
Query: 532 SVEMHHEALQEAVPGDNVGFNVK 600
++E + + A GDNV ++
Sbjct: 510 TIERNSSSCNLARAGDNVAIGLQ 532
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 132 bits (320), Expect = 2e-31
Identities = 76/196 (38%), Positives = 110/196 (56%), Gaps = 1/196 (0%)
Frame = +1
Query: 1 LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 180
L+++A GEFE G + GQTREH LLA TLGV +L+V +NKMD + +S+ R++EI+ +
Sbjct: 60 LVISARKGEFETGYERGGQTREHVLLAKTLGVSKLVVVINKMDESTVGWSKERYDEIEGK 119
Query: 181 VSSYIKKIGYN-PAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEAL 357
+ ++K GYN V F+PISG G NM K W G CL E L
Sbjct: 120 MVPFLKSSGYNVKKDVHFLPISGLLGTNMKTRMDKSN-CSWW---------SGPCLFEVL 169
Query: 358 DAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSV 537
D I P R P+R+P+ D YK +GTV +G++E+G + G ++ P +V SV
Sbjct: 170 DCIQVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTISEGDNMLVMPNKANVKVISV 227
Query: 538 EMHHEALQEAVPGDNV 585
+ ++ A PG+NV
Sbjct: 228 HCDEDRVRSAAPGENV 243
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 132 bits (318), Expect = 4e-31
Identities = 75/196 (38%), Positives = 109/196 (55%), Gaps = 1/196 (0%)
Frame = +1
Query: 1 LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 180
L+++A GEFE G K GQTREH LLA TLGV +LIV +NKMD +S+ R++EI+ +
Sbjct: 105 LVISARKGEFETGYEKGGQTREHVLLAKTLGVAKLIVVINKMDEPTVKWSKERYDEIESK 164
Query: 181 VSSYIKKIGYN-PAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEAL 357
+ +++ GYN V F+PISG G NM K W DG CL E L
Sbjct: 165 MVPFLRSSGYNVKKDVHFLPISGLLGSNMKTRMDKS--ICSWW--------DGPCLFEVL 214
Query: 358 DAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSV 537
D I P R P+R+P+ D YK +GTV +G++E+G ++ G ++ P +V +
Sbjct: 215 DCIEVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTIREGDSLLVMPNKTNVKVIGI 272
Query: 538 EMHHEALQEAVPGDNV 585
+ ++ A P +NV
Sbjct: 273 SLDEHKVRRAGPAENV 288
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 118 bits (285), Expect = 4e-27
Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 6/206 (2%)
Frame = +1
Query: 1 LIVAAGTGEFEAGISKNG-----QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 165
L+V A TG FEAG+ G QT+EHA L + GV+QLIV VNKMD+ YS+ RFE
Sbjct: 354 LVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI--GYSKERFE 411
Query: 166 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 345
IK ++ S+++ + ++V ++P+S N+++ + + +Q G CL
Sbjct: 412 FIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQ---------GFCL 462
Query: 346 IEALDAILPPARPTDKPLRLPLQDVYKIGGIGT-VPVGRVETGVLKPGTIVVFAPANITT 522
++A+D++ P+R KPL LP+ DV K G G++ETG ++ G+ V+ +P
Sbjct: 463 LDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVA 522
Query: 523 EVKSVEMHHEALQEAVPGDNVGFNVK 600
VKS+E + A GDNV +++
Sbjct: 523 AVKSIERDSNSCDIARAGDNVAVSLQ 548
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 118 bits (285), Expect = 4e-27
Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 6/206 (2%)
Frame = +1
Query: 1 LIVAAGTGEFEAGISKNG-----QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 165
L+V A TG FEAG+ G QT+EHA L + GV+QLIV VNKMD+ YS+ RFE
Sbjct: 354 LVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI--GYSKERFE 411
Query: 166 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 345
IK ++ S+++ + ++V ++P+S N+++ + + +Q G CL
Sbjct: 412 FIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQ---------GFCL 462
Query: 346 IEALDAILPPARPTDKPLRLPLQDVYKIGGIGT-VPVGRVETGVLKPGTIVVFAPANITT 522
++A+D++ P+R KPL LP+ DV K G G++ETG ++ G+ V+ +P
Sbjct: 463 LDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVA 522
Query: 523 EVKSVEMHHEALQEAVPGDNVGFNVK 600
VKS+E + A GDNV +++
Sbjct: 523 AVKSIERDSNSCDIARAGDNVAVSLQ 548
>02_04_0462 + 23131433-23132836
Length = 467
Score = 81.4 bits (192), Expect = 8e-16
Identities = 61/181 (33%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Frame = +1
Query: 55 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 234
QT+EH LLA +GV +++V +NK D + E + ++ EV + Y+ V
Sbjct: 173 QTKEHILLAKQVGVPKIVVFLNKKDQVD---DEELLQLVELEVRELLSSYEYDGDEV--- 226
Query: 235 PISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILP-PARPTDKPLRLPL 411
PI LE P K E +G LI+++D +P P R TD P L +
Sbjct: 227 PIVAGSALKALENLMANPAIKRGDDEWVDGIFS---LIDSVDNYIPVPQRQTDLPFLLAV 283
Query: 412 QDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTE--VKSVEMHHEALQEAVPGDNV 585
+DV+ I G GTV GR+E G +K G V T V VEM + + +A+ GDNV
Sbjct: 284 EDVFSITGRGTVATGRIERGTVKVGDTVDIVGIRETRNCTVTGVEMFQKTMDDAMAGDNV 343
Query: 586 G 588
G
Sbjct: 344 G 344
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 74.9 bits (176), Expect = 7e-14
Identities = 60/183 (32%), Positives = 86/183 (46%), Gaps = 5/183 (2%)
Frame = +1
Query: 55 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 234
QT+EH LLA +GV L+ +NK+D+ + P E +E+ S+ K G +
Sbjct: 170 QTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGS 229
Query: 235 PISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILP-PARPTDKPLRLPL 411
+S G N + GK L++A+D +P P R DK +P+
Sbjct: 230 ALSALQGTN-----------------DEIGKNAILKLMDAVDEYIPDPVRQLDKSFLMPI 272
Query: 412 QDVYKIGGIGTVPVGRVETGVLKPG---TIVVFAPAN-ITTEVKSVEMHHEALQEAVPGD 579
+DV+ I G GTV GRVE G +K G I+ P+ + T V VEM + L GD
Sbjct: 273 EDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGEAGD 332
Query: 580 NVG 588
NVG
Sbjct: 333 NVG 335
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1
Query: 124 MDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV------AFVPISGWHGDNMLEPSTK 282
M STEP + + + EV IKK+GYN + A+ G+H N PS++
Sbjct: 322 MSSTEPKINT--YANFRDEVLPRIKKLGYNAVQIMAIQEHAYYGSFGYHVTNFFAPSSR 378
>01_02_0044 - 10559637-10560509,10562849-10563295
Length = 439
Score = 29.9 bits (64), Expect = 2.5
Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 6/152 (3%)
Frame = +1
Query: 49 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE--PRFEEIKKEVSSYIKKIGYNPAA 222
+G+ E +++ +G++ L+ ++ + P + P + KE + Y P A
Sbjct: 23 SGELLELSIIDRVVGLRHLVRSLHIFSAAAPSGGDAKPSPARVIKEALGKAL-VDYYPFA 81
Query: 223 VAFVPISGWHGDNMLEPSTKMPWF----KGWQVERKEGKADGKCLIEALDAILPPARPTD 390
FV G G +E + + WF G ++ G D +I D +LP A P
Sbjct: 82 GRFVDGGGGPGSARVECTGEGAWFVEAAAGCSLDDVNG-LDHPLMIPE-DDLLPDAAPGV 139
Query: 391 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 486
PL LPL G VG + + G
Sbjct: 140 HPLDLPLMMQVTEFSCGGFVVGLISVHTMADG 171
>09_04_0232 -
15882589-15882720,15882799-15882889,15882987-15883087,
15883494-15883592,15883693-15883830,15883918-15884508,
15884819-15884989,15885068-15885203,15885561-15885592,
15886280-15886336,15886434-15886686,15886762-15886850,
15887181-15887234,15887498-15887689,15887777-15887938
Length = 765
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 201 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 302
DW+ C AHF RRQ +G F A G+
Sbjct: 697 DWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGL 730
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 451 VGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 588
+G + + P TIV +P T KSVE +E L A G ++G
Sbjct: 252 LGTISMDKVTPSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIG 297
>08_02_0869 -
22031889-22032017,22032114-22032204,22032289-22032389,
22033262-22033303,22033393-22033491,22033616-22033753,
22033853-22034428,22034897-22035070,22035155-22035290,
22035694-22035725,22036873-22037125,22037216-22037304,
22037771-22037824,22038801-22038992,22039065-22039229
Length = 756
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 201 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 302
DW+ C AHF RRQ +G F A G+
Sbjct: 689 DWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGL 722
>10_01_0291 + 3010685-3010838,3010954-3011489
Length = 229
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -1
Query: 413 CRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCHPE 240
C G+ V + G + A H+PSAL + + C P+ + I+ P PE
Sbjct: 105 CPGQEPSKIVPMSEGTFIAVAGQTHYPSALCASATICGPIKKKIIDHFHKKPVPPKPE 162
>10_01_0290 + 2999775-2999928,3000281-3000816
Length = 229
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -1
Query: 413 CRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCHPE 240
C G+ V + G + A H+PSAL + + C P+ + I+ P PE
Sbjct: 105 CPGQEPSKIVPMSEGTFVAIAGKTHYPSALCASATICGPIKKKIIDHFHKKPVPPKPE 162
>10_01_0204 + 2199778-2200835,2201212-2201311
Length = 385
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -1
Query: 467 VSTLPTGTVP-IPPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHP 297
+S +P +V + + S R RRR ++ RAG R+ SRA +R PS S+ HP
Sbjct: 202 ISFVPCPSVSSVRSAIVFSARRRRRQSAIARAGARV-SRAGVR--PSPASSILVGVHP 256
>09_04_0194 + 15504780-15506114
Length = 444
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/79 (29%), Positives = 31/79 (39%)
Frame = -1
Query: 449 GTVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEG 270
G+ P P L +C G +V + GR + P+ PS P+ QG L
Sbjct: 122 GSPPSPACLNRTCTGHAEN-TVTSSVGRGNVVTDVLSLPTTFPSA-----PVRQGPLATA 175
Query: 269 SNMLSPCHPEMGTKATAAG 213
L C P T+ AAG
Sbjct: 176 PAFLFTCGPTSLTQGLAAG 194
>09_01_0129 -
1954470-1955129,1956285-1956371,1956475-1956663,
1956772-1956900,1957386-1957472,1957572-1958036,
1959844-1959923,1961295-1961358,1961444-1961455
Length = 590
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = -3
Query: 240 NGHESDSSWVVANLLDV*GYFLLDFLKSGLTVWWFSGI-----HFVY 115
NGH +++V++N L Y LL + G ++ SG+ HFVY
Sbjct: 379 NGHYGVTTFVISNTLSSTPYLLLIAIIPGAIAYYLSGLQRQIEHFVY 425
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 302 HPLNQGILVEGSNMLSPCHPEMGTKATAAG 213
HP +L G N L+ C+P + AT AG
Sbjct: 258 HPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 177 LLDFLKSGLTVWWFSGIHFVY 115
+L+ GL VW GIHFVY
Sbjct: 234 ILEIKTGGLVVWTRGGIHFVY 254
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 115 VNKMDSTEPPYSEPRFEEIKKEV 183
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>03_01_0019 + 167900-168343,168567-168751,169076-169430
Length = 327
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -1
Query: 509 AGAKTTMVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPS 330
+ + + P PV+ PT T P PPI + G G S G GG + +RA+ P+
Sbjct: 48 SSSSNSSTPSIPPPVA--PTPTAPTPPI-PSPGTGSSNGSSGGGGGGWLNARATWYGAPN 104
>02_04_0343 -
22166148-22166318,22166422-22166465,22166563-22166626,
22166729-22167109,22167296-22167475,22167661-22167790,
22167844-22167946,22168060-22168093,22168216-22168300,
22168389-22168453,22168592-22168690,22168960-22169025,
22169200-22169439
Length = 553
Score = 28.3 bits (60), Expect = 7.5
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = -3
Query: 615 LTDTFFYVETYIVSRYSFLESFVVHLHRLDFSSDVGGGKDNNGTWFQHTSFNSADGHGTN 436
L DT + TY R+S ++V LDF+++ G + SA HG N
Sbjct: 149 LGDTKEHCSTYTGPRWSAAMVYIVGFWFLDFANNTVQGPAR-----AMMADLSAGHHGPN 203
Query: 435 TTDFVYVLQ---GKTQGLVSGA-GRWQD 364
++ L G G +SGA G+W D
Sbjct: 204 VGQSIFSLWMAIGSVLGYLSGANGKWHD 231
>10_01_0097 -
1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 335 ENASLKLSMPSCHLPAPLTSPCVFPCKTYTKS 430
E A++ +S P LP P P +FP + T+S
Sbjct: 21 EEAAVVVSQPQKTLPVPTAGPSLFPQQEVTQS 52
>09_04_0483 +
17979566-17980019,17980242-17980321,17980431-17980895,
17981460-17981597,17982574-17982660,17982781-17982909,
17983034-17983225,17983393-17983479,17983707-17984378
Length = 767
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = -3
Query: 240 NGHESDSSWVVANLLDV*GYFLLDFLKSGLTVWWFSGI-----HFVYSYDELFDT 91
NGH S+V+AN L Y L + G ++ +G+ HF Y LF T
Sbjct: 552 NGHYGVGSFVIANTLSATPYLALISVAPGAIGYYLTGLQSSIDHFAYFAVVLFTT 606
>02_01_0772 - 5755371-5756654,5757808-5757834
Length = 436
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 434 PPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPL 294
PP+ ++C R G A R+ RA A PSLR++ HPL
Sbjct: 8 PPVDSSACLCRVERSVAGAAAARLMPRAKA----CAQPSLRASIHPL 50
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,149,601
Number of Sequences: 37544
Number of extensions: 601259
Number of successful extensions: 2181
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2157
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -