Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1868
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    26   1.6  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   8.3  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   8.3  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   8.3  

>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 345 KDSRL*RCGLAHFNTKQMYINVNTASVC 428
           KD+R   CGL  F TK  ++     +VC
Sbjct: 373 KDARGIFCGLTSFTTKHHFVRAALEAVC 400


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 157 FPLPRVITSLFNLCSTLFKIEIVERTGQVHT 249
           F L  +I   F++C T+  + I  R+ Q HT
Sbjct: 305 FVLFTMILDTFSICVTVIVLNIHFRSPQTHT 335


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 12/49 (24%), Positives = 20/49 (40%)
 Frame = +1

Query: 25  IELLQRYAKERGFDSKLEWWDIPYWQRKQKWSLYGFDEEKIREYFPLPR 171
           I + Q Y + R F+  +   D   W+R  +  +    E    E   LP+
Sbjct: 420 ILITQEYCEPRTFEEAMSCPDRDLWKRAMEEEIKSLHENATWEIASLPK 468


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 600 LPPHPTRPLDNPGYFRIVCLCE 535
           L P P +P   PG  R +CL +
Sbjct: 460 LIPKPNKPPGEPGSVRPICLLD 481


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 881,883
Number of Sequences: 2352
Number of extensions: 19048
Number of successful extensions: 81
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)