Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1854
(800 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 35 0.015
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 34 0.027
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 32 0.11
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 32 0.11
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 31 0.19
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 31 0.25
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 30 0.33
SPBC1734.10c |||mRNA processing protein |Schizosaccharomyces pom... 30 0.33
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.44
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 29 0.58
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 29 0.77
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 29 1.0
SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.3
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.8
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 27 2.3
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 2.3
SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces p... 27 3.1
SPBC1711.10c |npl4||Cdc48-Ufd1-Npl4 complex component Npl4 |Schi... 27 3.1
SPAC17G6.09 |sec62||ER protein translocation subcomplex subunit ... 27 3.1
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 4.1
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 4.1
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 27 4.1
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 26 5.4
SPAC1B3.07c |vps28||ESCRT I complex subunit Vps28|Schizosaccharo... 26 5.4
SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces pombe... 26 5.4
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 26 5.4
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 26 7.2
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 26 7.2
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 7.2
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 25 9.5
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 9.5
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 25 9.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 9.5
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 25 9.5
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 25 9.5
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 34.7 bits (76), Expect = 0.015
Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Frame = +1
Query: 391 SSVSTTELIYKKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADIS---- 558
S+ S E+ TT T E SSTSS G L TST+ T S
Sbjct: 65 STGSPVEITSTSCTTDTSASTPIITESTSSTSSASTTGSSSSPLPSTSTSCTTSTSIPPT 124
Query: 559 --EQALEKFTKPDTKPSESPSTELPKPITSETPIDEIAGP 672
+L P P+ + ST +P P TS + D + P
Sbjct: 125 GGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNP 164
Score = 30.7 bits (66), Expect = 0.25
Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 4/126 (3%)
Frame = +1
Query: 352 SHKTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPT 531
S T ++ + +S +T+ I + T PT P SSTS+ P P
Sbjct: 270 STDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPP----------PP 319
Query: 532 STTKTADISEQALEKFTKPDTKPSESPSTELPKPITSETPIDEIAGP----EESNFPPSA 699
++T + S L P T S + ST +P S TP+ P S PP A
Sbjct: 320 ASTSSTGTSSSPL-----PSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPA 374
Query: 700 SSGYGG 717
S+ G
Sbjct: 375 STSSTG 380
Score = 28.3 bits (60), Expect = 1.3
Identities = 32/123 (26%), Positives = 46/123 (37%), Gaps = 4/123 (3%)
Frame = +1
Query: 361 TPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTT 540
T T++ D + S + TT T+ + I+ T + PTST+
Sbjct: 210 TSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTS 269
Query: 541 KTADISEQALEKFTKPDTKPSESPSTELPKPITSETPIDEIAGP----EESNFPPSASSG 708
T D + L P T S + ST +P S TP+ P S PP AS+
Sbjct: 270 ST-DTNSSPL-----PTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTS 323
Query: 709 YGG 717
G
Sbjct: 324 STG 326
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 33.9 bits (74), Expect = 0.027
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Frame = +1
Query: 340 AVDDSHKTPTATIDFDQSSVSTTELIYKKETTP-TVQEPTESPEKISSTSSKPLDGVHEQ 516
++ S K PTA++ SV ++ + + +TP + SP+ STSS+ + V
Sbjct: 451 SISTSVKQPTASVASSSVSVPSSSSVQPQSSTPISSSSSASSPQSTLSTSSEVVSEVSST 510
Query: 517 DLIPTSTTKTADISEQALEKFTKPDTKPSESPSTELPKPITSE--TPIDEI-AGPEESNF 687
L +S + S + + P T S S+ +P +S+ + I I +G S+
Sbjct: 511 LLSGSSAIPSTSSSTPSSSIISSPMTSVLSS-SSSIPTSSSSDFSSSITTISSGISSSSI 569
Query: 688 PPSASS 705
P + SS
Sbjct: 570 PSTFSS 575
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 31.9 bits (69), Expect = 0.11
Identities = 26/105 (24%), Positives = 49/105 (46%)
Frame = +1
Query: 391 SSVSTTELIYKKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADISEQAL 570
++VS TE + + + T PT++ + S TSS P+ + +S+T ++ S+ +
Sbjct: 244 NTVSPTESTFYETKSSTSSVPTQTIDSSSFTSSTPVS-------LTSSSTSSSGSSQDST 296
Query: 571 EKFTKPDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPSASS 705
+ P T + + PIT+ P A P + +P S S+
Sbjct: 297 TIDSTPSTIATSTLQPTTSSPITTSAPSLSSALP--TTYPSSLST 339
Score = 25.4 bits (53), Expect = 9.5
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Frame = +1
Query: 391 SSVSTTELIYKKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADISEQAL 570
+SVS+T + +PT +++ + +S L ++ T+T+ I L
Sbjct: 178 TSVSSTLTYHTPIASPTTSSNSDNEYTVDVITSSSLSSFVITNVDSTTTSVINYIGASTL 237
Query: 571 EKFTKPDT-KPSESPSTELPKPITSETPIDEI-AGPEESNFPPSASS 705
E + +T P+ES E K TS P I + S+ P S +S
Sbjct: 238 ESSSLTNTVSPTESTFYET-KSSTSSVPTQTIDSSSFTSSTPVSLTS 283
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 31.9 bits (69), Expect = 0.11
Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Frame = +1
Query: 451 PTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADISEQALEKFTKPDTKPSESPSTELPK 630
P+ SP S + + P PTS + +A + + T PS SP++
Sbjct: 1576 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYS 1635
Query: 631 PIT-SETPIDEIAGPEESNFPPSASSGYGGEPDYVEEXQAFGPGTCRYG-GKYMYQPT 798
P + S +P P ++ P++ S P Y ++ P + Y Y PT
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1693
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 31.1 bits (67), Expect = 0.19
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +1
Query: 385 DQSSVSTTELIYKKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADISEQ 564
D S+T+ + + + Q P S + + S +P E+ + TS T+ + +
Sbjct: 328 DSKQPSSTKSVAEVKVADEKQLPDASSQATPADSKEPRKEEAEKPV--TSATEVSSEKVE 385
Query: 565 ALEKFTKPDTKPSESPSTELPKP 633
++ T +K E PSTE KP
Sbjct: 386 KVDGNTSSPSKEEEKPSTEPEKP 408
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 30.7 bits (66), Expect = 0.25
Identities = 20/93 (21%), Positives = 41/93 (44%)
Frame = +1
Query: 445 QEPTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADISEQALEKFTKPDTKPSESPSTEL 624
+E E+P+ + SKP + EQ K S +E+ +K + + +
Sbjct: 422 EEKVETPKPEAQPVSKPKESAEEQKPSKEPEVKPTTPSASKVEEPSKKRDEDNHQKEETV 481
Query: 625 PKPITSETPIDEIAGPEESNFPPSASSGYGGEP 723
+P +TP+++ + P+ ++ P + S EP
Sbjct: 482 TQPKREKTPVEK-SFPKPASSPVTFSEDVKKEP 513
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 30.3 bits (65), Expect = 0.33
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Frame = +1
Query: 379 DFDQSSVSTTELIYKKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADIS 558
DFD+ + S +L Y + Q+ +E + K L+G + T K D+
Sbjct: 830 DFDKQTSSLAQLRYSIQNVAHAQKESEVKYNELNEQVKTLEG-----YVETVLEKFNDLK 884
Query: 559 EQALEKFTKPDTKPSE-SPSTELPKPITSETPIDEIAGPEESN 684
+ T PD PS P+ E ++S+T ++ E S+
Sbjct: 885 IENKVPETAPDVVPSSYPPAAESNVSVSSDTSTKDVEKQEPSS 927
>SPBC1734.10c |||mRNA processing protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 332
Score = 30.3 bits (65), Expect = 0.33
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +1
Query: 358 KTPTATIDFDQSSVSTTELIYKKETTPTVQEPTES--PEKISSTSSKPLDGVHEQDLI-- 525
K+P ++I+F S +ST +L+Y+ E P + +E +SS + + V E+ +
Sbjct: 250 KSPFSSIEFANSPISTIKLLYQLEVPPDFTKSSEDWMDIPVSSHAFDEISHVLEKGNLSF 309
Query: 526 PTSTTKTADISEQALEKFTK 585
P S K L KF K
Sbjct: 310 PVSAQKFGPWKVGLLPKFHK 329
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.9 bits (64), Expect = 0.44
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +1
Query: 391 SSVSTTELIYKKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADISEQAL 570
SS S++ +I ++ + PT + ISS+SS PTST+ T S +
Sbjct: 265 SSSSSSSIISSSSSSSS--SPTSTSSTISSSSSSSSS--------PTSTSSTISSSSSSS 314
Query: 571 EKFTKPDTKPSESPSTEL-PKPITSETPI-DEIAGPEESNFPPSASS 705
F+ + S S S+ P +S + I + P S+F + SS
Sbjct: 315 SSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSS 361
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 29.5 bits (63), Expect = 0.58
Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Frame = +1
Query: 364 PTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKISSTSSKPLDGV----HEQDLIPT 531
P A + +TT + + T PTV+ T + + + + P+ + E P
Sbjct: 153 PMAAMTTPMEETTTTTPMVETTTIPTVE--TMTTPMVEAMTILPMAAMTTPMEETTTTPM 210
Query: 532 STTKTADISEQALEKFTKPDTKPSESPSTELPKPITSETPIDEIAGP--EESNFPPSA 699
T T + E + + T P+E + I + TP++ + P E + P +A
Sbjct: 211 EETTTTPMVETMITPMVEAMTTPTEVVGRSMVSTIRTTTPMEAMITPTVETTTLPTAA 268
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 29.1 bits (62), Expect = 0.77
Identities = 26/94 (27%), Positives = 41/94 (43%)
Frame = +1
Query: 358 KTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTST 537
+TP++ F Q ++S L YK P + E ES EKIS S+ + P +
Sbjct: 315 QTPSSFNLFQQLTISKDLLEYKSFRIPPLVEAAES-EKISQLSTLEKRTLPSFPYNPFFS 373
Query: 538 TKTADISEQALEKFTKPDTKPSESPSTELPKPIT 639
+ TA+I + T + S S+ L I+
Sbjct: 374 SSTAEIDPYHFQGLTLSTSPISGVESSSLSSAIS 407
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 28.7 bits (61), Expect = 1.0
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 11/129 (8%)
Frame = +1
Query: 436 PTVQEPTESPEKISSTSSKP--LDGVHEQDLIPTSTTKTADISEQALEKFTKPDTKPSES 609
P + ++S I ++ +KP + H +IP T + A +K + S
Sbjct: 221 PKLCVQSKSMTNIRNSVAKPSLVRQSHSAGVIPIKPTASNASIRNAPSNLSKQFSPSGNS 280
Query: 610 PSTELPKPITSETPI--DEIAGPEESNFPPSASSGYGGEPDYVEEXQAFGP-------GT 762
P TE KP + D ++ P + S G P+ P GT
Sbjct: 281 PLTEASKPFVPQPSAAGDFRQAKGSASHPHGSGSSNGVAPNGKRALYKTEPCKNWQISGT 340
Query: 763 CRYGGKYMY 789
CRYG K +
Sbjct: 341 CRYGSKCQF 349
>SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 477
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +2
Query: 602 VNHLPLNCLNR*PAKHLLTKSQVQKKVISLQVPRAGMAESQTMLKXTKHSDLAL 763
V+ PL+ L+ L+K + K ++SLQ +A +A S +++ ++HS L +
Sbjct: 152 VSTCPLSFLSYSTGVERLSKELILKDLLSLQFQQALLAISPSVIVTSEHSPLVM 205
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 1.8
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 391 SSVSTTELIYKKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADIS---- 558
S++S++ I + +P+V T S I++ S+ + + + PT TT + +
Sbjct: 309 STISSSSFIVE---SPSVALSTSSTTTITNASTPAANTIISRSSKPTDTTNSISFANTTP 365
Query: 559 EQALEKFTKPDTKPSESPSTELPKPITSETPI 654
E + T P S +P T + S TPI
Sbjct: 366 ENTSTQITSPTAVNSSTPITS-SSVLNSSTPI 396
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -1
Query: 698 ALGGKLLSSGPAISSIGVSLVIGLGSSVEGDSLGLVSGFVNFSR 567
A GG L+ I S+G V G+ V G ++SG S+
Sbjct: 1228 AAGGLALAGVTTIGSVGSKAVTGVADGVTGTGKHIISGAKGISK 1271
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 595 KPSESPSTELPKPITSETPIDEIAGPE-ESNFPPSASSGY 711
+P PS E+P+P + T + E+ PE + P +S Y
Sbjct: 1217 RPILLPSFEIPEPCNTATSVQELINPEINQDDSPIVASRY 1256
>SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 571
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/101 (20%), Positives = 34/101 (33%)
Frame = +1
Query: 421 KKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADISEQALEKFTKPDTKP 600
K + T + + + I S + K L P +DIS A + P P
Sbjct: 389 KVQRTHLANDISSEKQSIKSANEKAYVTPKSNSLKPGFGKSLSDISNSATKNENVPFLPP 448
Query: 601 SESPSTELPKPITSETPIDEIAGPEESNFPPSASSGYGGEP 723
S +E IDE + +N P+++ P
Sbjct: 449 RTGVSKYFKLQKNTEKEIDEQVPSQSNNTTPTSAKSDSASP 489
>SPBC1711.10c |npl4||Cdc48-Ufd1-Npl4 complex component Npl4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 343 VDDSHKTPTATIDFDQSSVSTTELIYKKETTPTVQEPTE 459
+ S+ P T+ VST ++ KK + P +Q+P +
Sbjct: 86 IASSNNEPALTVTGAPKQVSTPDVSEKKPSMPVIQDPID 124
>SPAC17G6.09 |sec62||ER protein translocation subcomplex subunit
Sec62 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 273
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 361 TPTATIDFDQSSVSTTELIYKKETTPTVQEPTE 459
+P A+ ++SS STT L + PTV+E +E
Sbjct: 241 SPAASATPEKSSTSTTSLKNLRHRNPTVEEVSE 273
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 26.6 bits (56), Expect = 4.1
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +1
Query: 427 ETTPTVQEPTESPEKISS-TSSKPLDGVHEQDLIPTSTTKTADISEQALEKFTKPDTKPS 603
E + VQE E +++ T KP D + + + T+ ++ S + E+ PD K S
Sbjct: 383 EQSEVVQEVEEGDTNMTTNTILKPTDEIINKGYAYSITSSHSNHSNEKFEQIPSPDEKLS 442
Query: 604 ESPSTELPKPITSETPIDEIAGP 672
+ K + + D ++ P
Sbjct: 443 RTDIDTHVKQLQTTKSTDSLSIP 465
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 4.1
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Frame = +1
Query: 361 TPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTT 540
T T+ +SV++T +TP + + +STSS PL V+ S+T
Sbjct: 299 TATSASSTPLTSVNSTTTT-SASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASST 357
Query: 541 KTADI-SEQALEKFTKPDTKPSESPSTELPK-PITS 642
+ S A + P T + + +T P+TS
Sbjct: 358 PLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTS 393
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 26.6 bits (56), Expect = 4.1
Identities = 20/91 (21%), Positives = 39/91 (42%)
Frame = +1
Query: 430 TTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADISEQALEKFTKPDTKPSES 609
+TP +E SP + L+ V + + ++++S Q+ + +KP +
Sbjct: 44 STPNGKEAA-SPSALKQNVRPSLNSVQQTPASIDAVASSSNVSLQSQQPLSKPVVSSKPN 102
Query: 610 PSTELPKPITSETPIDEIAGPEESNFPPSAS 702
+T +P P S P ++ SN P + S
Sbjct: 103 QTTAMPPP--SNNPSRHVS--STSNKPAAVS 129
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 738 FFNIVWLSAIPARGTWREITFFWTCDFVNRCFAG 637
F +V LS +PA W+E WT D + C+ G
Sbjct: 442 FLIVVPLSTVPA---WQETLANWTPDLNSICYTG 472
>SPAC1B3.07c |vps28||ESCRT I complex subunit
Vps28|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 391 SSVSTTE--LIYKKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPT 531
+++STT I +TTP PT++P S++ +K + G+ Q+ I T
Sbjct: 120 NAISTTAEPSIAMNDTTPQTVNPTKAPSNPSASIAKSIAGL-VQNFITT 167
>SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 651 RCFAGYRFRQFSGR*FTGLSVRFCEL 574
+C+ GY+F ++G+ G V CEL
Sbjct: 105 QCYGGYQFGDWAGQLGDGRVVSLCEL 130
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 26.2 bits (55), Expect = 5.4
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 532 STTKTADISEQALEKFTKPDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPSASSGY 711
S+TK + + E T+P+ K E + P TS TP + + S P+++S Y
Sbjct: 27 SSTKEESSNTPSTE--TQPEKKAEEPEAAAEPSESTS-TPTNASSVATPSGTAPTSASLY 83
Query: 712 GGEPD 726
GE D
Sbjct: 84 VGELD 88
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 580 TKPDTKPSESPSTELPKP-ITSETPIDEIAGPEESNFPPSAS 702
TKP P+ TE P P +TSE+ E A P P ++
Sbjct: 147 TKP-AAPAAQSKTETPAPKVTSESTKKETAAPPPQETPTKSA 187
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 580 TKPDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPSASSGYGGEPDYV 732
TK KP PS+ P ++E ++ PE+ P + G YV
Sbjct: 320 TKEPAKPVPQPSSNEPPAPSAENKQPSVSSPEKKESPATHLLKVIGSSPYV 370
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.8 bits (54), Expect = 7.2
Identities = 29/113 (25%), Positives = 40/113 (35%)
Frame = +1
Query: 433 TPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADISEQALEKFTKPDTKPSESP 612
TP+ E + S SS P L+P + T + ++ L K + P P+
Sbjct: 690 TPSKTEDLDESFSGSEISSSP------SPLLP-DVSDTVEEQQKLLLK-SPPPPPPAVIV 741
Query: 613 STELPKPITSETPIDEIAGPEESNFPPSASSGYGGEPDYVEEXQAFGPGTCRY 771
T P PI P + GP PP + G P A G RY
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAG--AGPPPPPPPPPAVSAGGSRY 792
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +1
Query: 586 PDTKPSESP-STELPKPITSETPIDE 660
PD K E STELP I S TP D+
Sbjct: 174 PDRKKFEPRRSTELPSKIPSSTPKDD 199
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = +1
Query: 430 TTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADISEQALEKFTKPDTKPSES 609
T TV+ + + + + + + Q+ T T +S + P T P+ES
Sbjct: 372 TAETVEIARFAEQPVRAQQPEQYESSVVQEATETVTDVGKGVSSTVKNEVNVPSTIPTES 431
Query: 610 PSTELPKPITSETPIDE-IAGPEES 681
+ T+E P+ E + P E+
Sbjct: 432 ENPVAVGGTTAEHPVQEAVTAPTET 456
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 25.4 bits (53), Expect = 9.5
Identities = 31/125 (24%), Positives = 50/125 (40%)
Frame = +1
Query: 349 DSHKTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIP 528
+S PT + ++ ++ E + TT + SP K ++ SS+P V E D+
Sbjct: 59 NSTTLPTQEAAVETNASASHETSFALPTTSPAASLSISPTKSAAVSSEP--NV-EADVKS 115
Query: 529 TSTTKTADISEQALEKFTKPDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPSASSG 708
S+T A + +P T PS + TE P T + +S P S +
Sbjct: 116 LSSTPAAPQLNSPSHSY-EPTTFPSTTSITE-NLPTIDPTRSTRSSSHIQSLSPESKQTS 173
Query: 709 YGGEP 723
G P
Sbjct: 174 DGHRP 178
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 9.5
Identities = 25/90 (27%), Positives = 35/90 (38%)
Frame = +1
Query: 430 TTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADISEQALEKFTKPDTKPSES 609
++PT + P + P S+ SKP+ L S+ D P
Sbjct: 980 SSPTSEPPKDHPP--SAPLSKPVSTSPAAPLARVPPVPKLS-SKAPPVPLPSADAPPIPV 1036
Query: 610 PSTELPKPITSETPIDEIAGPEESNFPPSA 699
PST P PI + TP P+ S+ PSA
Sbjct: 1037 PSTAPPVPIPTSTP----PVPKSSSGAPSA 1062
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +1
Query: 421 KKETTPTVQEPTESPEKISSTSSKPLDGVHEQDLIPTSTTKTADISE 561
K TPT +P S +K S DG E +P S +K +E
Sbjct: 20 KVSPTPTSPKPKRSLKKKRIVLSDDEDGTIENSKVPASKSKVQKRNE 66
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 526 PTSTTKTADISEQALEKFTKPDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPSASS 705
P TA S K + +PS S +T++P P + TP +AG + + P S+
Sbjct: 289 PGGKDATASSSSSFSSKREEAAAEPSSSTATDIPPPYS--TP--SVAGASDYSTP---SA 341
Query: 706 GY 711
GY
Sbjct: 342 GY 343
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.128 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,247,581
Number of Sequences: 5004
Number of extensions: 68469
Number of successful extensions: 254
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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