Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1853
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145684-1|AAD38659.1| 1658|Drosophila melanogaster BcDNA.LD2387...    29   8.9  
AE014297-845|AAF54313.1| 1658|Drosophila melanogaster CG11970-PA...    29   8.9  

>AF145684-1|AAD38659.1| 1658|Drosophila melanogaster BcDNA.LD23876
           protein.
          Length = 1658

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -3

Query: 562 SAVGP*NSVSPRSATSADRHIARPLGAGTSSQEVRPPAQKKEACF 428
           S   P +S +P + ++   HI    G+ T   ++RPPA  + ACF
Sbjct: 526 SPTTPNHSNNPITVSATAGHIT---GSPTREVQIRPPASPRPACF 567


>AE014297-845|AAF54313.1| 1658|Drosophila melanogaster CG11970-PA
           protein.
          Length = 1658

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -3

Query: 562 SAVGP*NSVSPRSATSADRHIARPLGAGTSSQEVRPPAQKKEACF 428
           S   P +S +P + ++   HI    G+ T   ++RPPA  + ACF
Sbjct: 526 SPTTPNHSNNPITVSATAGHIT---GSPTREVQIRPPASPRPACF 567


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,518,843
Number of Sequences: 53049
Number of extensions: 574859
Number of successful extensions: 837
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)