BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1850
(750 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF230521-1|AAF36974.2| 185|Anopheles gambiae homeobox transcrip... 27 0.82
AY341224-1|AAR13788.1| 287|Anopheles gambiae TOLL9 protein. 25 3.3
AY341223-1|AAR13787.1| 287|Anopheles gambiae TOLL9 protein. 25 3.3
AY341222-1|AAR13786.1| 287|Anopheles gambiae TOLL9 protein. 25 3.3
AY341221-1|AAR13785.1| 287|Anopheles gambiae TOLL9 protein. 25 3.3
AY341220-1|AAR13784.1| 287|Anopheles gambiae TOLL9 protein. 25 3.3
AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein. 25 3.3
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 25 3.3
>AF230521-1|AAF36974.2| 185|Anopheles gambiae homeobox
transcription factor protein.
Length = 185
Score = 26.6 bits (56), Expect = 0.82
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 284 EIKSFFKLTQPKIAFCQQNQREXYLEAARELGLDTRVITFDGDEPMSKL 430
EI S KLT+ +I QN+R + +T +T+DG+ P L
Sbjct: 38 EIASMLKLTERQIKIWFQNRR-MKAKKDNSASANTPDLTYDGEIPQQSL 85
>AY341224-1|AAR13788.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 24.6 bits (51), Expect = 3.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 194 RNHLDLYIPYYAALMNGYPITGVDPLFKLHEIKSFFKLTQPKIAFCQQNQREXYLE 361
+NH +YI A+ + +TGV + IK FFK+ + N + YL+
Sbjct: 140 KNHTLVYILVSVAV-SFLILTGVGLFYYWFHIKYFFKIMKNSAVLSFFNDEKLYLD 194
>AY341223-1|AAR13787.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 24.6 bits (51), Expect = 3.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 194 RNHLDLYIPYYAALMNGYPITGVDPLFKLHEIKSFFKLTQPKIAFCQQNQREXYLE 361
+NH +YI A+ + +TGV + IK FFK+ + N + YL+
Sbjct: 140 KNHTLVYILVSVAV-SFLILTGVGLFYYWFHIKYFFKIMKNSAVLSFFNDEKLYLD 194
>AY341222-1|AAR13786.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 24.6 bits (51), Expect = 3.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 194 RNHLDLYIPYYAALMNGYPITGVDPLFKLHEIKSFFKLTQPKIAFCQQNQREXYLE 361
+NH +YI A+ + +TGV + IK FFK+ + N + YL+
Sbjct: 140 KNHTLVYILVSVAV-SFLILTGVGLFYYWFHIKYFFKIMKNSAVLSFFNDEKLYLD 194
>AY341221-1|AAR13785.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 24.6 bits (51), Expect = 3.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 194 RNHLDLYIPYYAALMNGYPITGVDPLFKLHEIKSFFKLTQPKIAFCQQNQREXYLE 361
+NH +YI A+ + +TGV + IK FFK+ + N + YL+
Sbjct: 140 KNHTLVYILVSVAV-SFLILTGVGLFYYWFHIKYFFKIMKNSAVLSFFNDEKLYLD 194
>AY341220-1|AAR13784.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 24.6 bits (51), Expect = 3.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 194 RNHLDLYIPYYAALMNGYPITGVDPLFKLHEIKSFFKLTQPKIAFCQQNQREXYLE 361
+NH +YI A+ + +TGV + IK FFK+ + N + YL+
Sbjct: 140 KNHTLVYILVSVAV-SFLILTGVGLFYYWFHIKYFFKIMKNSAVLSFFNDEKLYLD 194
>AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein.
Length = 576
Score = 24.6 bits (51), Expect = 3.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 194 RNHLDLYIPYYAALMNGYPITGVDPLFKLHEIKSFFKLTQPKIAFCQQNQREXYLE 361
+NH +YI A+ + +TGV + IK FFK+ + N + YL+
Sbjct: 367 KNHTLVYILVSVAV-SFLILTGVGLFYYWFHIKYFFKIMKNSAVLSFFNDEKLYLD 421
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 24.6 bits (51), Expect = 3.3
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 68 CQIDAATGETETNASVLQRSVRLAKYMRTLGLKPGDVLALAGRNHLDLYIPYYAALMN 241
C I + T ++A+ L+ L ++RT+ L DV+ L H DL +P Y L N
Sbjct: 16 CNIASININTISSATKLEA---LKTFIRTMDL---DVIFLQEVYHTDLALPGYNVLSN 67
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,741
Number of Sequences: 2352
Number of extensions: 11626
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -