Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1849
         (450 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    28   0.18 
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.23 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   2.8  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   5.0  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            22   8.7  
EF519526-1|ABP73589.1|  250|Anopheles gambiae APL2 protein.            22   8.7  
EF519523-1|ABP73586.1|  250|Anopheles gambiae APL2 protein.            22   8.7  
EF519522-1|ABP73585.1|  250|Anopheles gambiae APL2 protein.            22   8.7  
EF519521-1|ABP73584.1|  250|Anopheles gambiae APL2 protein.            22   8.7  
EF519519-1|ABP73582.1|  250|Anopheles gambiae APL2 protein.            22   8.7  
EF519516-1|ABP73579.1|  250|Anopheles gambiae APL2 protein.            22   8.7  
EF519515-1|ABP73578.1|  250|Anopheles gambiae APL2 protein.            22   8.7  
EF519511-1|ABP73574.1|  250|Anopheles gambiae APL2 protein.            22   8.7  
EF519508-1|ABP73571.1|  250|Anopheles gambiae APL2 protein.            22   8.7  

>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 27.9 bits (59), Expect = 0.18
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 301 PGTRPPHRPSLFPAPICRSIAIYARVLPVLIFHV 200
           P   PP    + P P+C S   +AR+L +++  V
Sbjct: 127 PSWEPPGWQKVCPYPLCPSYRQFARILSIILIGV 160


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 0.23
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = -3

Query: 355 PSCRAVSTQNGFLSLR--SWPGTRPPHRPSLFP 263
           PSCR+   +    S R  SWP +RP  +P   P
Sbjct: 269 PSCRSPPARRRSRSTRPTSWPRSRPTSKPKRLP 301


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 177  RRTPPNQKT*KINTGKTLAYIAIDRQIGAGNREGRCGGLVPGQERRERNP 326
            RR PP+ +T ++   +   Y+ +  Q     R+G  G +  G++RR R P
Sbjct: 1114 RRLPPSPRTTEMRRRRR-NYMQL--QYRRRRRDGELGDVPQGRQRRGRIP 1160


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 306 LGQEQGHRTGLLYSQLQSVDRLRYMREFCQ 217
           LG E G   GL++S   +V    Y+  FC+
Sbjct: 263 LGPEFGGSIGLIFSLANAVACAMYVVGFCE 292


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 304 WPGTRPPHRPSLFPAPICRS 245
           WP        +LFP+ ICRS
Sbjct: 183 WPPLAVSASITLFPSDICRS 202


>EF519526-1|ABP73589.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 37  LVLLAIVHNSRALVDEVVDVLKL 105
           L+LL + HN    VDEV    KL
Sbjct: 181 LILLKLPHNKLTSVDEVPVFXKL 203


>EF519523-1|ABP73586.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 37  LVLLAIVHNSRALVDEVVDVLKL 105
           L+LL + HN    VDEV    KL
Sbjct: 181 LILLKLPHNKLTSVDEVPVFXKL 203


>EF519522-1|ABP73585.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 37  LVLLAIVHNSRALVDEVVDVLKL 105
           L+LL + HN    VDEV    KL
Sbjct: 181 LILLKLPHNKLTSVDEVPVFXKL 203


>EF519521-1|ABP73584.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 37  LVLLAIVHNSRALVDEVVDVLKL 105
           L+LL + HN    VDEV    KL
Sbjct: 181 LILLKLPHNKLTSVDEVPVFXKL 203


>EF519519-1|ABP73582.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 37  LVLLAIVHNSRALVDEVVDVLKL 105
           L+LL + HN    VDEV    KL
Sbjct: 181 LILLKLPHNKLTSVDEVPVFXKL 203


>EF519516-1|ABP73579.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 37  LVLLAIVHNSRALVDEVVDVLKL 105
           L+LL + HN    VDEV    KL
Sbjct: 181 LILLKLPHNKLTSVDEVPVFXKL 203


>EF519515-1|ABP73578.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 37  LVLLAIVHNSRALVDEVVDVLKL 105
           L+LL + HN    VDEV    KL
Sbjct: 181 LILLKLPHNKLTSVDEVPVFXKL 203


>EF519511-1|ABP73574.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 37  LVLLAIVHNSRALVDEVVDVLKL 105
           L+LL + HN    VDEV    KL
Sbjct: 181 LILLKLPHNKLTSVDEVPVFXKL 203


>EF519508-1|ABP73571.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 37  LVLLAIVHNSRALVDEV 87
           L+LL + HN    VDEV
Sbjct: 181 LILLKLAHNKLTSVDEV 197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,726
Number of Sequences: 2352
Number of extensions: 7503
Number of successful extensions: 53
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)