Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1849
         (450 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069198-1|AAH69198.1|  452|Homo sapiens regulator of chromosome...    30   3.2  
AF113248-1|AAF21966.1|  307|Homo sapiens heart specific serine p...    30   3.2  
BC002469-1|AAH02469.1|  341|Homo sapiens chromosome 1 open readi...    29   7.3  
AY358436-1|AAQ88802.1|  341|Homo sapiens VPAA547 protein.              29   7.3  
AL590133-23|CAI13348.1|  341|Homo sapiens chromosome 1 open read...    29   7.3  
AB075837-1|BAB85543.1|  481|Homo sapiens KIAA1957 protein protein.     29   7.3  

>BC069198-1|AAH69198.1|  452|Homo sapiens regulator of chromosome
           condensation 1 protein.
          Length = 452

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = +3

Query: 162 KRIGGRRTPPNQKT*KINTGKTLAYIAIDRQIGAGNREGRCGGLVPGQERR 314
           KRI  RR+PP     K    K     A  R  GA + +G CG   P Q+ R
Sbjct: 4   KRIAKRRSPPADAIPKSKKVKDTRAAASRRVPGARSCQGACGPSPPDQKTR 54


>AF113248-1|AAF21966.1|  307|Homo sapiens heart specific serine
           proteinase protein.
          Length = 307

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +1

Query: 1   SVVMSVRFVRTILVLLAIVHNSRALVDEVVDVLKLGKEIGE 123
           SV M  RFVRTI++       SRA+VD  + +++L ++I E
Sbjct: 134 SVFMQTRFVRTIIL---HPRYSRAVVDYDISIVELSEDISE 171


>BC002469-1|AAH02469.1|  341|Homo sapiens chromosome 1 open reading
           frame 56 protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -3

Query: 397 LSSVCPL-APLCSEGPSCRAVSTQNGFLSLRSWPGTRPPHRPSLFPAPICRSIAIYARV 224
           L   CPL   LC++  +C + ST +   +   +P       PSL PA  C ++A + RV
Sbjct: 258 LREECPLDTSLCTD-TNCASQSTTSTRTTTTPFPTIHLRSSPSLPPASPCPALAFWKRV 315


>AY358436-1|AAQ88802.1|  341|Homo sapiens VPAA547 protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -3

Query: 397 LSSVCPL-APLCSEGPSCRAVSTQNGFLSLRSWPGTRPPHRPSLFPAPICRSIAIYARV 224
           L   CPL   LC++  +C + ST +   +   +P       PSL PA  C ++A + RV
Sbjct: 258 LREECPLDTSLCTD-TNCASQSTTSTRTTTTPFPTIHLRSSPSLPPASPCPALAFWKRV 315


>AL590133-23|CAI13348.1|  341|Homo sapiens chromosome 1 open reading
           frame 56 protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -3

Query: 397 LSSVCPL-APLCSEGPSCRAVSTQNGFLSLRSWPGTRPPHRPSLFPAPICRSIAIYARV 224
           L   CPL   LC++  +C + ST +   +   +P       PSL PA  C ++A + RV
Sbjct: 258 LREECPLDTSLCTD-TNCASQSTTSTRTTTTPFPTIHLRSSPSLPPASPCPALAFWKRV 315


>AB075837-1|BAB85543.1|  481|Homo sapiens KIAA1957 protein protein.
          Length = 481

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
 Frame = +3

Query: 144 RCRKDAK--RIGGRRTPPNQKT*KINTGKTLAYIAIDRQIGAGNREGRCGGLVPGQERRE 317
           RCR+  +  R  GR    +  + +  T   L      R I  G R   C GL+P    R+
Sbjct: 4   RCRRRRRPHRSSGRVPRASPGSLRAETPACLRTDLRPRAITPGRRCSPCPGLLPAAPMRK 63

Query: 318 RNPF*VETARHDGPSEQSGASGQTDESVPXAXK 416
            N + +E  R  G  E   A G   E+   A K
Sbjct: 64  TNMWFLERLR--GSGENGAARGVGSEAGDKASK 94


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,971,138
Number of Sequences: 237096
Number of extensions: 1044106
Number of successful extensions: 2962
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2962
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)