Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1849
         (450 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058541-1|AAL13770.1|  664|Drosophila melanogaster LD24308p pro...    34   0.10 
AE014298-1093|AAF46301.1|  664|Drosophila melanogaster CG2206-PA...    34   0.10 
AE014298-1474|AAF46609.1|  624|Drosophila melanogaster CG15295-P...    29   2.9  
BT016148-1|AAV37033.1|  526|Drosophila melanogaster AT18987p pro...    27   8.8  
AY075207-1|AAL68075.1|  526|Drosophila melanogaster AT14419p pro...    27   8.8  

>AY058541-1|AAL13770.1|  664|Drosophila melanogaster LD24308p
           protein.
          Length = 664

 Score = 33.9 bits (74), Expect = 0.10
 Identities = 21/112 (18%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
 Frame = +1

Query: 70  ALVDEVVDVLKLGKEIGEEIIASWNVVGKTLNVSEGVXXXXXXXXXXXXXAKLSHISQSI 249
           AL+++V+D++ + KE+   ++ +W++V ++  ++  +              +L  +S+ I
Sbjct: 26  ALIEDVLDIIHVVKEVTSGVLKAWDIV-QSSPLAANIDFPLMREKQKKVLQRLKEVSKQI 84

Query: 250 DRLELGIEKAGAVAL-FLAKNGGRGTRFELKLXDMTXLLNKVAPVDRQMRVY 402
           D  E    +  A+A+  +            K+ D++  +N+++   +QM+ Y
Sbjct: 85  DNTEDQHAQYVALAIESVTSFMHNNAPIMAKMNDISDTINRISSRYQQMQKY 136


>AE014298-1093|AAF46301.1|  664|Drosophila melanogaster CG2206-PA,
           isoform A protein.
          Length = 664

 Score = 33.9 bits (74), Expect = 0.10
 Identities = 21/112 (18%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
 Frame = +1

Query: 70  ALVDEVVDVLKLGKEIGEEIIASWNVVGKTLNVSEGVXXXXXXXXXXXXXAKLSHISQSI 249
           AL+++V+D++ + KE+   ++ +W++V ++  ++  +              +L  +S+ I
Sbjct: 26  ALIEDVLDIIHVVKEVTSGVLKAWDIV-QSSPLAANIDFPLMREKQKKVLQRLKEVSKQI 84

Query: 250 DRLELGIEKAGAVAL-FLAKNGGRGTRFELKLXDMTXLLNKVAPVDRQMRVY 402
           D  E    +  A+A+  +            K+ D++  +N+++   +QM+ Y
Sbjct: 85  DNTEDQHAQYVALAIESVTSFMHNNAPIMAKMNDISDTINRISSRYQQMQKY 136


>AE014298-1474|AAF46609.1|  624|Drosophila melanogaster CG15295-PA
           protein.
          Length = 624

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -2

Query: 347 SXSFNSKRVPLPPFLARNKATAPAFSIPSSNLSI 246
           S + ++  VP PPFL+R  ATA A +  ++ LSI
Sbjct: 133 SDNSDTPLVPRPPFLSRAAATAAAAAAAAAALSI 166


>BT016148-1|AAV37033.1|  526|Drosophila melanogaster AT18987p
           protein.
          Length = 526

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = -3

Query: 385 CPLAP--LCSEGPSCRAVSTQNGFLSLRSWPGTRPP 284
           CP AP  L S GP CR   T   F  + SW     P
Sbjct: 34  CPRAPKYLLSPGPRCRRRRTGCRFFPIWSWTSIGTP 69


>AY075207-1|AAL68075.1|  526|Drosophila melanogaster AT14419p
           protein.
          Length = 526

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = -3

Query: 385 CPLAP--LCSEGPSCRAVSTQNGFLSLRSWPGTRPP 284
           CP AP  L S GP CR   T   F  + SW     P
Sbjct: 34  CPRAPKYLLSPGPRCRRRRTGCRFFPIWSWTSIGTP 69


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,287,296
Number of Sequences: 53049
Number of extensions: 342406
Number of successful extensions: 999
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)