Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1846
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64643-1|AAA28695.1|  338|Drosophila melanogaster Mov34 protein.      101   1e-21
AY089283-1|AAL90021.1|  338|Drosophila melanogaster AT07973p pro...   101   1e-21
AE013599-3862|AAF47199.1|  338|Drosophila melanogaster CG3416-PA...   101   1e-21

>M64643-1|AAA28695.1|  338|Drosophila melanogaster Mov34 protein.
          Length = 338

 Score =  101 bits (241), Expect = 1e-21
 Identities = 46/58 (79%), Positives = 51/58 (87%)
 Frame = +1

Query: 16  IIYQLQDIFNLLPDIANDNFIDNLYVKTNDQSLVVYLAALVRSIIALHNLINNKITNR 189
           I+YQLQDIFNLLPDI ND F   +YVKTNDQ LVVYLA++VRSIIALHNLINNK+ NR
Sbjct: 229 IVYQLQDIFNLLPDITNDQFTGTMYVKTNDQMLVVYLASMVRSIIALHNLINNKLANR 286


>AY089283-1|AAL90021.1|  338|Drosophila melanogaster AT07973p
           protein.
          Length = 338

 Score =  101 bits (241), Expect = 1e-21
 Identities = 46/58 (79%), Positives = 51/58 (87%)
 Frame = +1

Query: 16  IIYQLQDIFNLLPDIANDNFIDNLYVKTNDQSLVVYLAALVRSIIALHNLINNKITNR 189
           I+YQLQDIFNLLPDI ND F   +YVKTNDQ LVVYLA++VRSIIALHNLINNK+ NR
Sbjct: 229 IVYQLQDIFNLLPDITNDQFTGTMYVKTNDQMLVVYLASMVRSIIALHNLINNKLANR 286


>AE013599-3862|AAF47199.1|  338|Drosophila melanogaster CG3416-PA
           protein.
          Length = 338

 Score =  101 bits (241), Expect = 1e-21
 Identities = 46/58 (79%), Positives = 51/58 (87%)
 Frame = +1

Query: 16  IIYQLQDIFNLLPDIANDNFIDNLYVKTNDQSLVVYLAALVRSIIALHNLINNKITNR 189
           I+YQLQDIFNLLPDI ND F   +YVKTNDQ LVVYLA++VRSIIALHNLINNK+ NR
Sbjct: 229 IVYQLQDIFNLLPDITNDQFTGTMYVKTNDQMLVVYLASMVRSIIALHNLINNKLANR 286


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,878,257
Number of Sequences: 53049
Number of extensions: 254652
Number of successful extensions: 447
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)